Factsheet for Os01t0367700-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 3
cytosol 2
plastid 5

Predictors

GFP

MS/MS

Papers

plasma membrane: 18260611
plasma membrane: 27800704
plasma membrane: 28056797

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 28056797 doi

N Yang, T Wang

Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.

msms PMID: 18260611 doi

SH Natera, KL Ford, AM Cassin, JH Patterson, EJ Newbigin, A Bacic

Plant Cell Biology Research Centre, VIC, Australia. s.natera@unimelb.edu.au

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os07t0668000-00	Rice	cytosol, plasma membrane	5.02	90.32
KXG32500	Sorghum	plastid	89.07	89.23
Zm00001d040829_P003	Maize	plastid	88.17	88.33
KRH21021	Soybean	cytosol	69.18	71.48
VIT_05s0020g01890.t01	Wine grape	cytosol	73.12	70.96
KRH11268	Soybean	cytosol	68.64	70.79
KRH02197	Soybean	nucleus	67.74	69.23
KRH50926	Soybean	nucleus	67.74	68.98
GSMUA_Achr5P26940_001	Banana	nucleus	72.76	68.58
GSMUA_Achr6P20270_001	Banana	plastid	50.0	67.23
Solyc01g067640.2.1	Tomato	nucleus	68.82	66.21
PGSC0003DMT400027661	Potato	nucleus	68.64	65.14
GSMUA_Achr11P...	Banana	plastid	70.07	64.74
GSMUA_Achr11P...	Banana	plastid	69.71	64.62
GSMUA_Achr2P02360_001	Banana	plastid	65.95	57.32
Os01t0925700-01	Rice	cytosol	31.72	47.71
Os11t0242500-01	Rice	mitochondrion	45.88	44.21
Os08t0453800-00	Rice	endoplasmic reticulum, plasma membrane	24.55	42.81
Os08t0112500-01	Rice	nucleus	57.35	42.78
Os01t0958000-01	Rice	plasma membrane	36.38	39.57
Os05t0389700-01	Rice	nucleus	36.38	39.11
Os02t0559300-02	Rice	plasma membrane	50.54	38.68
Os07t0596600-02	Rice	plasma membrane	48.57	38.33
Os02t0304500-00	Rice	plastid	34.95	37.43
Os12t0577700-00	Rice	plasma membrane	43.01	32.43
Os01t0201000-01	Rice	plasma membrane	1.97	8.59

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.3.1.8	Gene3D:3.30.200.20	EntrezGene:4325730	ProteinID:BAB64715.1	ProteinID:BAB64745.1
ProteinID:BAD88341.1	ProteinID:BAF04957.1	ProteinID:BAS72150.1	ncoils:Coil	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0004693	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006464	GO:GO:0006468
GO:GO:0007049	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310
GO:GO:0016740	GO:GO:0019538	GO:GO:0051726	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EnsemblPlantsGene:Os01g0367700
EnsemblPlants:Os01t0367700-01	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24056
PANTHER:PTHR24056:SF320	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	UniProt:Q93W00	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	UniParc:UPI00000A2AF8	RefSeq:XP_015621316.1	SEG:seg	:	:

Description

CDK-LIKE 5, cyclin-dependent kinase-like 5Similar to Cyclin-dependent protein kinase-like protein. (Os01t0367700-01)

Coordinates

chr1:+:15059450..15067522

Molecular Weight (calculated)

61749.2 Da

IEP (calculated)

10.463

GRAVY (calculated)

-0.586

Length

558 amino acids

Sequence
(BLAST)

001: MGCVFGRPSS SPPAAAARKG RRKKRSSPMP APSTDSPAAD QSPGRGRPRR RLGRKPGPRQ GCVPAPAAAE QLAAGWPPWL VAVAGEALRG WTPRRADTFE
101: KLNKIGSGTY SNVYRARDTV SGRIVALKKV RFDNLEPESV KFMAREILIL RKLDHPNVIK LEGLVTSRMS CSLYLVFEYM EHDLAGLAAS PDVKFTLPQI
201: KCYVQQLLSG LEHCHNNNVL HRDIKGSNLL LDNNGILKIA DFGLATFFDP RHKRPMTSRV VTLWYRPPEL LLGATDYGVG VDLWSAGCIL AELLHGKPIM
301: PGRTEVEQLH KIFKLCGSPS EEYWKKSKLP HATIFKPQQP YKRCIREAFK DFPPSSLPLV ETLLAIDPAE RQTATSALQS EFFATEPYAC DPSSLPTYPP
401: SKEMDAKMRD EEARRLRAAA KAKGEGVKRT RTRDRSQRAG PAPEANAELQ ANLDQRRRMI THANAKSKSE KFPPPHQDGA MGNPLGSSRH MEPMYEHQDA
501: SFSTVVPIQK GSSQTWSGPL VDPAALGQSR RKKQTALDAK AAAYSKQLQK DKGGTRAR

Best Arabidopsis Sequence Match ( AT1G54610.1 )
(BLAST)

001: MGCVFGREAA TTTTAEAKQA KSSKASSGVV VVGESSVTKS NGVIADDVEK KKNEEANGDK ERKSSKGDRR RSTKPNPRLS NPSKHWRGEQ VAAGWPSWLS
101: DACGEALNGW VPRKADTFEK IDKIGQGTYS NVYKAKDMLT GKIVALKKVR FDNLEPESVK FMAREILVLR RLDHPNVVKL EGLVTSRMSC SLYLVFQYMD
201: HDLAGLASSP VVKFSESEVK CLMRQLISGL EHCHSRGVLH RDIKGSNLLI DDGGVLKIAD FGLATIFDPN HKRPMTSRVV TLWYRAPELL LGATDYGVGI
301: DLWSAGCILA ELLAGRPIMP GRTEVEQLHK IYKLCGSPSE DYWKKGKFTH GAIYKPREPY KRSIRETFKD FPPSSLPLID ALLSIEPEDR QTASAALKSE
401: FFTSEPYACE PADLPKYPPS KEIDAKRRDE ETRRQRAASK AQGDGARKNR HRDRSNRALP APEANAELQS NVDRRRLITH ANAKSKSEKF PPPHQDGGAM
501: GVPLGASQHI DPTFIPRDMV PSFTSSSFNF SKDEPPTQVQ TWSGPLGHPI TGVSRKKKDN TKSSKGKRAV VA

Arabidopsis Description

Probable serine/threonine-protein kinase At1g54610 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVM9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.