Factsheet for GSMUA_Achr6P20270_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	plastid	86.02	59.11
KRH21021	Soybean	cytosol	70.12	53.89
KRH11268	Soybean	cytosol	69.88	53.6
GSMUA_Achr2P02360_001	Banana	plastid	81.93	52.96
GSMUA_Achr5P26940_001	Banana	nucleus	75.18	52.7
KRH50926	Soybean	nucleus	68.67	52.01
KRH02197	Soybean	nucleus	68.19	51.83
GSMUA_Achr11P...	Banana	plastid	74.7	51.49
VIT_05s0020g01890.t01	Wine grape	cytosol	70.12	50.61
KXG32500	Sorghum	plastid	67.47	50.27
Os01t0367700-01	Rice	plasma membrane	67.23	50.0
Zm00001d040829_P003	Maize	plastid	66.02	49.19
PGSC0003DMT400027661	Potato	nucleus	69.4	48.98
Solyc01g067640.2.1	Tomato	nucleus	68.43	48.97
GSMUA_Achr6P07970_001	Banana	plastid	60.24	46.38
GSMUA_Achr6P02960_001	Banana	cytosol	40.0	46.24
GSMUA_Achr6P07440_001	Banana	cytosol	58.07	38.62
GSMUA_Achr6P28920_001	Banana	plastid	60.24	37.65
GSMUA_Achr10P...	Banana	cytosol	45.06	37.63
GSMUA_Achr8P08480_001	Banana	nucleus	57.35	36.01
GSMUA_Achr2P05620_001	Banana	cytosol	57.35	35.36
GSMUA_Achr5P16890_001	Banana	nucleus	57.59	34.59
GSMUA_Achr6P24660_001	Banana	nucleus	53.98	34.36
GSMUA_Achr10P...	Banana	nucleus	61.45	33.95
GSMUA_Achr3P30270_001	Banana	nucleus, plastid	53.49	33.53
GSMUA_Achr5P01580_001	Banana	nucleus, plastid	51.57	32.23
GSMUA_Achr4P03350_001	Banana	nucleus	51.57	32.08
GSMUA_Achr2P13490_001	Banana	nucleus	50.12	31.95
GSMUA_Achr4P28060_001	Banana	nucleus	51.57	31.8
GSMUA_Achr5P05370_001	Banana	nucleus	39.28	31.59
GSMUA_Achr7P26440_001	Banana	cytosol, nucleus, plastid	52.53	31.19
GSMUA_Achr8P00590_001	Banana	cytosol, mitochondrion, nucleus, plastid	46.99	28.18
GSMUA_Achr9P08070_001	Banana	nucleus	60.24	26.37
GSMUA_Achr6P17460_001	Banana	cytosol	58.8	25.93

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.3.1.8	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr6G20270_001
EnsemblPlants:GSMUA_Achr6P20270_001	EnsemblPlants:GSMUA_Achr6T20270_001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M0T8M5	PFAM:PF00069
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24056	PANTHER:PTHR24056:SF176	InterPro:Prot_kinase_dom	SMART:SM00220
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002957E1B	:	:	:

Description

Probable serine/threonine-protein kinase At1g54610 [Source:GMGC_GENE;Acc:GSMUA_Achr6G20270_001]

Coordinates

chr6:+:14738204..14740809

Molecular Weight (calculated)

46576.6 Da

IEP (calculated)

8.935

GRAVY (calculated)

-0.218

Length

415 amino acids

Sequence
(BLAST)

001: MGCVLAKEAS LSPTLSSSGR RRREKKHTVA DGSKSQAALP GIEIAWQEDA ECPDGKRHSR RRRQGPDPRL SSSPGHVHGE LVAAGWPSWL SNVAGEAIKG
101: WTPRRADTFE KIDKASFLLY CSKLYLNVYR ARDMLTGKVV AMKKVRFDTM EPESVKFMAR EILILRRLDH PNVVKLEGLV TSRMSCSLYL VFEYMEHDLA
201: GLAANPKIKF TEPQVKCYMH QLLSGLEHCH SNGVLHRDIK GSNLLIDNEG LLKIADFGLA TFFDPNHKHQ MTSRVVTLWY RAPELLLGAI DYGVGIDLWS
301: AGCILAELLA GKPIMPGRTE VEQLHKIFKL CGSPSEDYWK KSKLPHATIF KPQQPYKRCI KETFKDFPPS SLPLVETLLA IDPAERLTST AALNCESWNF
401: SVLVFMNVVE GTFLL

Best Arabidopsis Sequence Match ( AT1G53050.1 )
(BLAST)

001: MGCVCGKPSA IEDSKDSPRE RFSSKSSSEF RVSRPVASSR REEPLRIKER SDVVSVRPVL SNKQSNVSLH LRGENLSRRE KRIENVAATS PLAMSITIAK
101: ATEGEYVAAG WPPWLASVAG EAIRGWVPRR ADSFEKLDKI GQGTYSNVYR ARDLDQKKIV ALKKVRFDNL EPESVRFMAR EIQILRRLDH PNIIKLEGLV
201: TSRMSCSLYL VFEYMEHDLA GLASHPAIKF SESQVKCYLQ QLLHGLDHCH SRGVLHRDIK GSNLLIDNSG VLKIADFGLA SFFDPRQTQP LTSRVVTLWY
301: RPPELLLGAT RYGAAVDLWS AGCILAELYA GKPIMPGRTE VEQLHKIFKL CGSPTEDYWV KSRLPHATIF KPTQPYKRLV GETFKEFPQP ALALLETLLS
401: VNPDDRGTAT AALKSEFFST RPLPCDPSSL PKYPPSKELD ARMRDEESRR QVGGNRDQRH QERRGTKESR AIPAPDANAE LVASMQKRQS QSTNRSRSEK
501: FNPHPEEVAS GFPIDPPRPS SQAFEPNRES QGNIIPHKRA SHSGPLSRRS ASAKGRRNYQ DSQKVSSIAD YSAMPGFAAT RTGAPQQETC RGMTRLPGSF
601: KETSEEANQE ENGRSNKKDP ILLGYGSKGH KIHYSGPLVV PSGNMDQVLK DHDRHIQEAV RRARIDKARV KKLQADEASS QQVATNHPSS VSSR

Arabidopsis Description

F8L10.9 protein [Source:UniProtKB/TrEMBL;Acc:Q9LNN0]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.