Factsheet for GSMUA_Achr6P07970_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH63826	Soybean	cytosol	43.23	63.84
GSMUA_Achr6P20270_001	Banana	plastid	46.38	60.24
KRH54127	Soybean	mitochondrion	62.15	59.93
KRH59775	Soybean	nucleus	60.3	58.56
PGSC0003DMT400011092	Potato	cytosol	61.6	58.55
Solyc03g097690.2.1	Tomato	cytosol	61.97	58.49
KRH41090	Soybean	cytosol	59.18	57.48
GSMUA_Achr5P26940_001	Banana	nucleus	62.71	57.09
VIT_17s0000g00620.t01	Wine grape	nucleus	61.78	56.73
GSMUA_Achr11P...	Banana	plastid	62.34	55.63
GSMUA_Achr11P...	Banana	plastid	61.04	54.65
Bra022756.1-P	Field mustard	cytosol	55.66	52.45
CDY05828	Canola	cytosol	55.84	51.81
AT5G50860.1	Thale cress	nucleus	55.66	51.72
Bra035716.1-P	Field mustard	cytosol	55.66	51.72
CDY45813	Canola	cytosol	54.92	51.66
CDX71637	Canola	cytosol	55.47	51.55
GSMUA_Achr2P02360_001	Banana	plastid	60.67	50.93
CDX84882	Canola	cytosol	55.47	50.25
GSMUA_Achr6P02960_001	Banana	cytosol	32.84	49.3
GSMUA_Achr6P07440_001	Banana	cytosol	54.36	46.96
GSMUA_Achr10P...	Banana	cytosol	41.56	45.07
GSMUA_Achr6P28920_001	Banana	plastid	52.88	42.92
GSMUA_Achr2P05620_001	Banana	cytosol	52.32	41.9
GSMUA_Achr5P16890_001	Banana	nucleus	53.25	41.53
GSMUA_Achr8P08480_001	Banana	nucleus	50.28	41.0
GSMUA_Achr3P30270_001	Banana	nucleus, plastid	49.91	40.63
GSMUA_Achr6P24660_001	Banana	nucleus	48.98	40.49
GSMUA_Achr10P...	Banana	nucleus	55.47	39.81
GSMUA_Achr4P03350_001	Banana	nucleus	47.68	38.53
GSMUA_Achr5P01580_001	Banana	nucleus, plastid	47.31	38.4
GSMUA_Achr2P13490_001	Banana	nucleus	45.27	37.48
GSMUA_Achr4P28060_001	Banana	nucleus	46.57	37.3
GSMUA_Achr5P05370_001	Banana	nucleus	35.62	37.21
GSMUA_Achr8P00590_001	Banana	cytosol, mitochondrion, nucleus, plastid	47.31	36.85
GSMUA_Achr7P26440_001	Banana	cytosol, nucleus, plastid	46.2	35.62
GSMUA_Achr6P17460_001	Banana	cytosol	53.43	30.61
GSMUA_Achr9P08070_001	Banana	nucleus	53.25	30.27

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.3.1.8	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr6G07970_001
EnsemblPlants:GSMUA_Achr6P07970_001	EnsemblPlants:GSMUA_Achr6T07970_001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M0T546	PFAM:PF00069
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24056	PANTHER:PTHR24056:SF176	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000294E84D	SEG:seg

Description

transposon protein, putative, unclassified, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr6G07970_001]

Coordinates

chr6:-:5352549..5355534

Molecular Weight (calculated)

59457.5 Da

IEP (calculated)

10.128

GRAVY (calculated)

-0.399

Length

539 amino acids

Sequence
(BLAST)

001: MGCVVSKRQA PAVAAEKERP PPPHDRPRIP SAPPSDASGW PAWLVAVAGD AIRGWTPRRA DCFQKLAKIG SGTYSNVYKA RDVETGRVVA LKKVRFDAVE
101: PESVRFMARE ITVLRRLDHP NVIRLEGLAI SRVSSALYLI FEYMEHDLAG LAAAPGVHFT EPQVKCYMKQ LLSGLEHCHS RGVLHRDIKG SNLLLDNEGT
201: LKIADFGLAS TFDPDRRVPM TSRVVTLWYR APELLLGATY YGVGVDLWSA GCILAELLLG KPILPGRTEV EQLHKIFKLC GSPSEKYWKK SKLPHATIVK
301: PKQNYKRCIG ETFKDFPPSS LSLIDSLLSI EPADRGTATA ALNSEFFATE PYACEPSSLP QYPPSKEMDA KLRDEKARRP SAAGRKGNAE ATKPRAHNRR
401: RRAVPAPEAN AELQVNLERM RLMTRINVTS KSEKFPPPHQ DGAVGIPLND SYKGPSSFTA FDASFASSIF ESMEDSRNTL NGLPDAIVNA GKSAARRTSK
501: EGTQKLATSL ALRRLVELNR SSKVHRTRGK ELEVFGSVK

Best Arabidopsis Sequence Match ( AT1G54610.1 )
(BLAST)

001: MGCVFGREAA TTTTAEAKQA KSSKASSGVV VVGESSVTKS NGVIADDVEK KKNEEANGDK ERKSSKGDRR RSTKPNPRLS NPSKHWRGEQ VAAGWPSWLS
101: DACGEALNGW VPRKADTFEK IDKIGQGTYS NVYKAKDMLT GKIVALKKVR FDNLEPESVK FMAREILVLR RLDHPNVVKL EGLVTSRMSC SLYLVFQYMD
201: HDLAGLASSP VVKFSESEVK CLMRQLISGL EHCHSRGVLH RDIKGSNLLI DDGGVLKIAD FGLATIFDPN HKRPMTSRVV TLWYRAPELL LGATDYGVGI
301: DLWSAGCILA ELLAGRPIMP GRTEVEQLHK IYKLCGSPSE DYWKKGKFTH GAIYKPREPY KRSIRETFKD FPPSSLPLID ALLSIEPEDR QTASAALKSE
401: FFTSEPYACE PADLPKYPPS KEIDAKRRDE ETRRQRAASK AQGDGARKNR HRDRSNRALP APEANAELQS NVDRRRLITH ANAKSKSEKF PPPHQDGGAM
501: GVPLGASQHI DPTFIPRDMV PSFTSSSFNF SKDEPPTQVQ TWSGPLGHPI TGVSRKKKDN TKSSKGKRAV VA

Arabidopsis Description

Probable serine/threonine-protein kinase At1g54610 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVM9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.