Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY05828 | Canola | cytosol | 86.55 | 86.4 |
| Bra035716.1-P | Field mustard | cytosol | 86.21 | 86.21 |
| CDX71637 | Canola | cytosol | 86.21 | 86.21 |
| Bra022756.1-P | Field mustard | cytosol | 83.1 | 84.27 |
| CDY45813 | Canola | cytosol | 81.9 | 82.9 |
| CDX84882 | Canola | cytosol | 83.62 | 81.51 |
| KRH63826 | Soybean | cytosol | 44.66 | 70.96 |
| KRH54127 | Soybean | mitochondrion | 65.0 | 67.44 |
| KRH59775 | Soybean | nucleus | 63.79 | 66.67 |
| KRH41090 | Soybean | cytosol | 63.28 | 66.13 |
| PGSC0003DMT400011092 | Potato | cytosol | 59.83 | 61.2 |
| Solyc03g097690.2.1 | Tomato | cytosol | 60.0 | 60.95 |
| VIT_17s0000g00620.t01 | Wine grape | nucleus | 61.21 | 60.48 |
| GSMUA_Achr6P07970_001 | Banana | plastid | 51.72 | 55.66 |
| AT1G54610.1 | Thale cress | nucleus | 51.72 | 52.45 |
| AT3G05050.1 | Thale cress | nucleus, plastid | 48.45 | 47.39 |
| Zm00001d042285_P001 | Maize | endoplasmic reticulum | 44.66 | 46.84 |
| Os01t0925700-01 | Rice | cytosol | 29.66 | 46.36 |
| Zm00001d011967_P001 | Maize | plastid | 44.48 | 46.15 |
| EES04133 | Sorghum | cytosol, plasma membrane, plastid | 44.31 | 46.14 |
| TraesCS3A01G439200.1 | Wheat | cytosol, plasma membrane, plastid | 42.59 | 44.42 |
| HORVU3Hr1G095820.3 | Barley | cytosol, peroxisome, plasma membrane | 42.41 | 44.32 |
| TraesCS3D01G432000.1 | Wheat | plasma membrane | 42.41 | 44.24 |
| TraesCS3B01G473100.1 | Wheat | cytosol, plasma membrane, plastid | 42.41 | 44.09 |
| AT1G53050.1 | Thale cress | nucleus, plastid | 51.21 | 42.8 |
| AT1G33770.1 | Thale cress | nucleus | 44.14 | 41.69 |
| AT1G71530.1 | Thale cress | plastid | 46.03 | 40.76 |
| AT4G10010.2 | Thale cress | nucleus | 45.52 | 40.68 |
| AT4G22940.2 | Thale cress | cytosol | 38.45 | 39.82 |
| AT5G44290.3 | Thale cress | nucleus | 42.76 | 38.51 |
| AT1G09600.1 | Thale cress | nucleus | 47.24 | 38.38 |
| AT1G57700.1 | Thale cress | nucleus | 45.34 | 38.01 |
| AT5G10270.1 | Thale cress | nucleus | 32.59 | 37.43 |
| AT1G74330.1 | Thale cress | nucleus | 43.62 | 36.19 |
| AT5G39420.1 | Thale cress | nucleus | 39.83 | 35.87 |
| AT5G64960.1 | Thale cress | nucleus | 31.72 | 35.87 |
| AT1G03740.1 | Thale cress | nucleus | 44.48 | 34.86 |
| AT1G18670.3 | Thale cress | nucleus | 43.1 | 34.72 |
| GSMUA_Achr8P00590_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 40.34 | 33.81 |
| AT3G01085.3 | Thale cress | plastid | 36.55 | 33.6 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:18.4.3.1.8 | Gene3D:3.30.200.20 | EntrezGene:835158 | ProteinID:AED96002.1 | ArrayExpress:AT5G50860 |
| EnsemblPlantsGene:AT5G50860 | RefSeq:AT5G50860 | TAIR:AT5G50860 | RefSeq:AT5G50860-TAIR-G | EnsemblPlants:AT5G50860.1 | TAIR:AT5G50860.1 |
| Unigene:At.29709 | ProteinID:BAA98122.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 |
| GO:GO:0004674 | GO:GO:0004693 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005886 | GO:GO:0006464 | GO:GO:0006468 | GO:GO:0007049 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016301 | GO:GO:0016310 |
| GO:GO:0016740 | GO:GO:0019538 | GO:GO:0046777 | GO:GO:0051726 | InterPro:IPR000719 | InterPro:Kinase-like_dom_sf |
| RefSeq:NP_199899.1 | PFAM:PF00069 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | ScanProsite:PS00107 | ScanProsite:PS00108 | PFscan:PS50011 | PANTHER:PTHR24056 | PANTHER:PTHR24056:SF333 |
| InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS | UniProt:Q9LSM7 | SMART:SM00220 | SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS |
| UniParc:UPI00000A097E | SEG:seg | : | : | : | : |
Description
Cyclin-dependent protein kinase-like [Source:UniProtKB/TrEMBL;Acc:Q9LSM7]
Coordinates
chr5:-:20693455..20697233
Molecular Weight (calculated)
64291.1 Da
IEP (calculated)
10.007
GRAVY (calculated)
-0.526
Length
580 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCVLCKEST GDKRKHNNPD EPPPADLRNT EDLPSSSSTT TAAISVEIGE KKKKDLDSIQ IQPERRTWHT GDFSAGSSRR PGMSLRTPEG WPPWLIAACG
101: DSIKDLTPRR ATTYEKLEKI GQGTYSNVYK AKDLLSGKIV ALKKVRFDNL EAESVKFMAR EILVLRRLNH PNVIKLQGLV TSRVSCSLYL VFEYMEHDLS
201: GLAATQGLKF DLPQVKCFMK QLLSGLEHCH SRGVLHRDIK GSNLLIDNDG ILKIADFGLA TFYDPKQKQT MTSRVVTLWY RPPELLLGAT SYGTGVDLWS
301: AGCIMAELLA GKPVMPGRTE VEQLHKIFKL CGSPSDSYWK KYRLPNATLF KPQHPYKRCV AEAFNGFTPS SVHLVETLLT IDPADRGTST SALNSEFFTT
401: EPLPCDPSSL PKYPPSKELN VKLRDEELRR QKGLAGKGSG IDGARRIRYR GDRTGRAIPA PEANAESQAN LDRWRSISQT NGKSKSEKFP PPHQDGAVGY
501: PLEDLSKKTS VFGAKTETSF GLSRSLKSGE GTSMRKISNK DGARGASSRK YIWGLKPPPA LGLSMDLLFR SRSEVFGIRR
101: DSIKDLTPRR ATTYEKLEKI GQGTYSNVYK AKDLLSGKIV ALKKVRFDNL EAESVKFMAR EILVLRRLNH PNVIKLQGLV TSRVSCSLYL VFEYMEHDLS
201: GLAATQGLKF DLPQVKCFMK QLLSGLEHCH SRGVLHRDIK GSNLLIDNDG ILKIADFGLA TFYDPKQKQT MTSRVVTLWY RPPELLLGAT SYGTGVDLWS
301: AGCIMAELLA GKPVMPGRTE VEQLHKIFKL CGSPSDSYWK KYRLPNATLF KPQHPYKRCV AEAFNGFTPS SVHLVETLLT IDPADRGTST SALNSEFFTT
401: EPLPCDPSSL PKYPPSKELN VKLRDEELRR QKGLAGKGSG IDGARRIRYR GDRTGRAIPA PEANAESQAN LDRWRSISQT NGKSKSEKFP PPHQDGAVGY
501: PLEDLSKKTS VFGAKTETSF GLSRSLKSGE GTSMRKISNK DGARGASSRK YIWGLKPPPA LGLSMDLLFR SRSEVFGIRR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.