Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra031892.1-P | Field mustard | nucleus | 94.54 | 93.63 |
| CDY31293 | Canola | nucleus | 94.35 | 93.44 |
| CDY33994 | Canola | nucleus | 94.15 | 93.42 |
| AT5G10270.1 | Thale cress | nucleus | 89.86 | 91.29 |
| VIT_07s0141g00280.t01 | Wine grape | cytosol | 40.94 | 84.68 |
| Zm00001d012392_P001 | Maize | cytosol | 32.75 | 82.35 |
| Solyc04g056280.2.1 | Tomato | nucleus | 77.19 | 77.34 |
| EES15089 | Sorghum | cytosol | 38.01 | 60.37 |
| Os08t0453800-00 | Rice | endoplasmic reticulum, plasma membrane | 34.7 | 55.62 |
| AT5G50860.1 | Thale cress | nucleus | 35.87 | 31.72 |
| AT1G54610.1 | Thale cress | nucleus | 35.09 | 31.47 |
| AT3G05050.1 | Thale cress | nucleus, plastid | 35.28 | 30.52 |
| AT1G33770.1 | Thale cress | nucleus | 36.45 | 30.46 |
| AT4G22940.2 | Thale cress | cytosol | 32.55 | 29.82 |
| AT5G44290.3 | Thale cress | nucleus | 36.65 | 29.19 |
| AT1G53050.1 | Thale cress | nucleus, plastid | 38.99 | 28.82 |
| AT1G71530.1 | Thale cress | plastid | 36.65 | 28.7 |
| AT5G39420.1 | Thale cress | nucleus | 35.48 | 28.26 |
| AT4G10010.2 | Thale cress | nucleus | 35.48 | 28.04 |
| AT3G01085.3 | Thale cress | plastid | 33.53 | 27.26 |
| AT1G74330.1 | Thale cress | nucleus | 37.04 | 27.18 |
| AT1G18670.3 | Thale cress | nucleus | 37.43 | 26.67 |
| AT1G57700.1 | Thale cress | nucleus | 35.87 | 26.59 |
| AT1G09600.1 | Thale cress | nucleus | 35.87 | 25.77 |
| AT1G03740.1 | Thale cress | nucleus | 36.26 | 25.14 |
| Os01t0201000-01 | Rice | plasma membrane | 2.34 | 9.38 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:13.1.1.2.3 | MapMan:15.3.2.1.1 | MapMan:18.4.3.1.3 | Gene3D:3.30.200.20 | EntrezGene:836620 |
| ProteinID:AED97975.1 | EMBL:AF360134 | ArrayExpress:AT5G64960 | EnsemblPlantsGene:AT5G64960 | RefSeq:AT5G64960 | TAIR:AT5G64960 |
| RefSeq:AT5G64960-TAIR-G | EnsemblPlants:AT5G64960.1 | TAIR:AT5G64960.1 | EMBL:AY039990 | EMBL:AY062449 | Unigene:At.72847 |
| ProteinID:BAA97308.1 | EMBL:BT002565 | Symbol:CDKC2 | GO:GO:0000003 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004672 | GO:GO:0004674 | GO:GO:0004693 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005654 |
| GO:GO:0005737 | GO:GO:0005829 | GO:GO:0006139 | GO:GO:0006397 | GO:GO:0006464 | GO:GO:0006468 |
| GO:GO:0006950 | GO:GO:0007049 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008353 |
| GO:GO:0009414 | GO:GO:0009605 | GO:GO:0009607 | GO:GO:0009615 | GO:GO:0009628 | GO:GO:0009791 |
| GO:GO:0009908 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016310 | GO:GO:0016604 | GO:GO:0016740 |
| GO:GO:0019538 | GO:GO:0048366 | GO:GO:0048440 | GO:GO:0050792 | GO:GO:0051726 | InterPro:IPR000719 |
| InterPro:Kinase-like_dom_sf | RefSeq:NP_201301.1 | PFAM:PF00069 | PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007095 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025281 | ScanProsite:PS00107 | ScanProsite:PS00108 | PFscan:PS50011 | PANTHER:PTHR24056 | PANTHER:PTHR24056:SF240 |
| InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS | UniProt:Q8W4P1 | SMART:SM00220 | SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS |
| UniParc:UPI00000A401D | SEG:seg | : | : | : | : |
Description
CDKC-2Cyclin-dependent kinase C-2 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4P1]
Coordinates
chr5:+:25955374..25958995
Molecular Weight (calculated)
57131.9 Da
IEP (calculated)
9.425
GRAVY (calculated)
-0.814
Length
513 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAAAFGQLN LEEPPPIWGS RSVDCFEKLE QIGEGTYGQV YMAKEIKTGE IVALKKIRMD NEREGFPITA IREIKILKKL HHENVIHLKE IVTSPGRDRD
101: DQGKPDNNKY KGGIYMVFEY MDHDLTGLAD RPGLRFTVPQ IKCYMKQLLT GLHYCHVNQV LHRDIKGSNL LIDNEGNLKL ADFGLARSYS HDHTGNLTNR
201: VITLWYRPPE LLLGATKYGP AIDMWSVGCI FAELLNGKPI LPGKTENEQL NKIYELCGSP DESNWPGVSK MPWYNQMKSS RPLKRRVREI YRHFDRHALE
301: LLEKMLVLDP SQRICAKDAL DAEYFWTDPL PCDPKSLPTY ESSHEFQTKK KRQQMRHNEE AAKKQKLQHP QQQHSRLPPQ QHGVGQSHAA PLWPAGPNHP
401: MNNNAPPPQI PAGGHYYGGK PRGGAPVPNR YPPSGNQTGG YNNQSRGGYS SGAYPPQGRG APYGAGPRGP SGGYGVGPPN YSQGGGQYGG SGGSGRGQNP
501: MGGARNQQYG WQP
101: DQGKPDNNKY KGGIYMVFEY MDHDLTGLAD RPGLRFTVPQ IKCYMKQLLT GLHYCHVNQV LHRDIKGSNL LIDNEGNLKL ADFGLARSYS HDHTGNLTNR
201: VITLWYRPPE LLLGATKYGP AIDMWSVGCI FAELLNGKPI LPGKTENEQL NKIYELCGSP DESNWPGVSK MPWYNQMKSS RPLKRRVREI YRHFDRHALE
301: LLEKMLVLDP SQRICAKDAL DAEYFWTDPL PCDPKSLPTY ESSHEFQTKK KRQQMRHNEE AAKKQKLQHP QQQHSRLPPQ QHGVGQSHAA PLWPAGPNHP
401: MNNNAPPPQI PAGGHYYGGK PRGGAPVPNR YPPSGNQTGG YNNQSRGGYS SGAYPPQGRG APYGAGPRGP SGGYGVGPPN YSQGGGQYGG SGGSGRGQNP
501: MGGARNQQYG WQP
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.