Factsheet for Os08t0453800-00

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plasma membrane

Predictor Summary:

cytosol 2
nucleus 2
extracellular 4
endoplasmic reticulum 5
vacuole 4
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	cytosol
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	endoplasmic reticulum

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0316600-01
Os01t0621300-01
Os01t0919900-01
Os02t0133000-00
Os02t0258300-01
Os02t0438200-01
Os02t0504800-01
Os03t0344100-02
Os04t0379900-01
Os05t0364600-01
Os05t0586400-01
Os06t0524300-01
Os07t0673500-01
Os08t0428400-01
Os09t0132600-01
Os09t0509000-01
Os11t0586300-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G10270.1	Os02t0133000-00	AT1G27630.1	12678503
AT5G10270.1	Os02t0438200-01	AT1G27630.1	12678503
AT5G10270.1	Os09t0132600-01	AT3G15000.1	12678503
AT5G10270.1	Os09t0509000-01	AT3G15000.1	12678503
AT5G10270.1	Os08t0428400-01	AT3G17860.1	21798944
AT5G64960.1	Os01t0316600-01	AT1G02840.1	18208522
AT5G64960.1	Os03t0344100-02	AT1G02840.1	18208522
AT5G64960.1	Os05t0364600-01	AT1G02840.1	18208522
AT5G64960.1	Os07t0673500-01	AT1G02840.1	18208522
AT5G64960.1	Os02t0133000-00	AT1G27630.1	12678503
AT5G64960.1	Os02t0438200-01	AT1G27630.1	12678503
AT5G64960.1	Os01t0919900-01	AT2G43710.1	20706207
AT5G64960.1	Os02t0504800-01	AT2G43710.1	20706207
AT5G64960.1	Os04t0379900-01	AT2G43710.1	20706207
AT5G64960.1	Os09t0132600-01	AT3G15000.1	12678503
AT5G64960.1	Os09t0509000-01	AT3G15000.1	12678503
AT5G64960.1	Os11t0586300-01	AT3G55760.1	20706207
AT5G64960.1	Os01t0621300-01	AT4G01090.1	21798944
AT5G64960.1	Os02t0258300-01	AT4G01090.1	21798944
AT5G64960.1	Os05t0586400-01	AT4G01090.1	21798944
AT5G64960.1	Os06t0524300-01	AT4G01090.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d032078_P002	Maize	cytosol	79.38	78.64
EES15089	Sorghum	cytosol	79.06	78.33
VIT_07s0141g00280.t01	Wine grape	cytosol	41.88	54.03
CDY72385	Canola	cytosol	23.12	44.05
Bra024341.1-P	Field mustard	cytosol	50.94	40.95
CDY08835	Canola	cytosol	50.31	37.62
AT5G10270.1	Thale cress	nucleus	55.94	35.45
Solyc04g056280.2.1	Tomato	nucleus	55.94	34.96
AT5G64960.1	Thale cress	nucleus	55.62	34.7
CDY33994	Canola	nucleus	55.94	34.62
Bra009045.1-P	Field mustard	nucleus	55.0	34.58
CDX96988	Canola	nucleus	55.0	34.58
CDX69849	Canola	nucleus	55.0	34.58
Bra031892.1-P	Field mustard	nucleus	55.94	34.56
CDY31293	Canola	nucleus	55.62	34.36
CDY18101	Canola	cytosol	49.38	34.27
CDY56227	Canola	nucleus	54.38	34.12
Bra028333.1-P	Field mustard	nucleus	54.06	34.06
Os01t0958000-01	Rice	plasma membrane	54.38	33.92
Os05t0389700-01	Rice	nucleus	53.44	32.95
Os01t0925700-01	Rice	cytosol	28.75	24.8
Os01t0367700-01	Rice	plasma membrane	42.81	24.55
CDY14526	Canola	cytosol	51.25	22.84
Os02t0304500-00	Rice	plastid	36.88	22.65
Os11t0242500-01	Rice	mitochondrion	40.31	22.28
Os02t0559300-02	Rice	plasma membrane	42.81	18.79
Os07t0596600-02	Rice	plasma membrane	40.31	18.25
Os08t0112500-01	Rice	nucleus	42.19	18.05
Os12t0577700-00	Rice	plasma membrane	39.38	17.03
Os01t0201000-01	Rice	plasma membrane	0.0	0.0
Os07t0668000-00	Rice	cytosol, plasma membrane	0.0	0.0

Protein Annotations

Gene3D:1.10.510.10	MapMan:13.1.1.2.3	MapMan:15.3.2.1.1	Gene3D:3.30.200.20	EntrezGene:9268645	UniProt:A0A0P0XGP8
ProteinID:BAT05720.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674
GO:GO:0004693	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006464	GO:GO:0006468	GO:GO:0007049	GO:GO:0008150	GO:GO:0008152
GO:GO:0008353	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538
GO:GO:0051726	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EnsemblPlantsGene:Os08g0453800	EnsemblPlants:Os08t0453800-00	PFAM:PF00069
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24056	PANTHER:PTHR24056:SF211	InterPro:Prot_kinase_dom	SMART:SM00220
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0001C7BBD6	RefSeq:XP_015650221.1	SEG:seg	:

Description

CYCLIN-DEPENDENT KINASE C;3Serine/threonine protein kinase-related domain containing protein. (Os08t0453800-00)

Coordinates

chr8:-:22220068..22227461

Molecular Weight (calculated)

36785.8 Da

IEP (calculated)

8.032

GRAVY (calculated)

-0.125

Length

320 amino acids

Sequence
(BLAST)

001: MWYQFFYEFT FFTIGQAGSA LVLPLHLFIF PNNLSEVFEA MDIITGERAA LKKIKLDDGK EGFPRQILRE IKLLKKLDHE NIIRLKEIVV SPGTAHGAGG
101: SDDYMYRGDI YMVFEYMDHD LKKVLHHSTP SQVKYYMEQL LKGLHYCHVN NVLHRDIKGA NLLISGGGKL LKLADFGLAR PFTRDGSFTN HVITLWYRPP
201: ELLLGATNYA EAVDIWSVGC IFAEFLLRKP LFPGRTEQEQ LSKIFELCGF PNEENWPGVS KLPLYKTIRP TTPTKRRLRD IFHNFDSHAV DLIDRMLILN
301: PTERISAHDA LCAAYFITKM

Best Arabidopsis Sequence Match ( AT5G64960.1 )
(BLAST)

001: MAAAAFGQLN LEEPPPIWGS RSVDCFEKLE QIGEGTYGQV YMAKEIKTGE IVALKKIRMD NEREGFPITA IREIKILKKL HHENVIHLKE IVTSPGRDRD
101: DQGKPDNNKY KGGIYMVFEY MDHDLTGLAD RPGLRFTVPQ IKCYMKQLLT GLHYCHVNQV LHRDIKGSNL LIDNEGNLKL ADFGLARSYS HDHTGNLTNR
201: VITLWYRPPE LLLGATKYGP AIDMWSVGCI FAELLNGKPI LPGKTENEQL NKIYELCGSP DESNWPGVSK MPWYNQMKSS RPLKRRVREI YRHFDRHALE
301: LLEKMLVLDP SQRICAKDAL DAEYFWTDPL PCDPKSLPTY ESSHEFQTKK KRQQMRHNEE AAKKQKLQHP QQQHSRLPPQ QHGVGQSHAA PLWPAGPNHP
401: MNNNAPPPQI PAGGHYYGGK PRGGAPVPNR YPPSGNQTGG YNNQSRGGYS SGAYPPQGRG APYGAGPRGP SGGYGVGPPN YSQGGGQYGG SGGSGRGQNP
501: MGGARNQQYG WQP

Arabidopsis Description

CDKC-2Cyclin-dependent kinase C-2 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4P1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.