Factsheet for Os09t0509000-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
mitochondrion 5
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
EpiLoc:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	mitochondrion

plastid: 17189339
mitochondrion: 19010998
nucleus: 19621931
plastid: 21433289
mitochondrion: 23027867
nucleus: 26035336
plasma membrane: 27800704
plastid: 27992503

msms PMID: 23027867 doi

G Liu, H Tian, YQ Huang, J Hu, YX Ji, SQ Li, YQ Feng, L Guo, YG Zhu

State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan 430072, China.

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 26035336 doi

M Li, X Yin, K Sakata, P Yang, S Komatsu

§Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan., †Key Laboratory of Plant Germplasm Enhancement and Specialty Agriculture, Wuhan Botanical Garden, Chinese Academy of Sciences, Wuhan 430074, China., ‡National Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan.

msms PMID: 19010998 doi

S Huang, NL Taylor, R Narsai, H Eubel, J Whelan, AH Millar

Australian Research Council Centre of Excellence in Plant Energy Biology, M316, University of Western Australia, Crawley, 6009 Western Australia, Australia.

msms PMID: 27992503 doi

S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.

msms PMID: 21433289 doi

S Reiland, J Grossmann, K Baerenfaller, P Gehrig, A Nunes-Nesi, AR Fernie, W Gruissem, S Baginsky

Department of Biology, Plant Biotechnology, ETH Zurich, Zurich, Switzerland.

msms PMID: 17189339 doi

T Kleffmann, A von Zychlinski, D Russenberger, M Hirsch-Hoffmann, P Gehrig, W Gruissem, S Baginsky

Institute of Plant Sciences, Eidgenössische Technische Hochschule Zurich, 8092 Zurich, Switzerland.

msms PMID: 19621931 doi

T Aki, S Yanagisawa

Department of Applied Biological Chemistry, The University of Tokyo, Japan.

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0201000-01
Os02t0708400-01
Os08t0453800-00

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G15000.1	Os02t0708400-01	AT3G27960.1	21798944
AT3G15000.1	Os01t0201000-01	AT5G10270.1	12678503
AT3G15000.1	Os08t0453800-00	AT5G10270.1	12678503
AT3G15000.1	Os01t0201000-01	AT5G64960.1	12678503
AT3G15000.1	Os08t0453800-00	AT5G64960.1	12678503

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os09t0132600-01	Rice	mitochondrion	87.88	87.44
EER92767	Sorghum	mitochondrion	66.41	75.79
Zm00001d048291_P001	Maize	mitochondrion	72.47	70.0
TraesCS7B01G160200.1	Wheat	mitochondrion	69.44	66.11
TraesCS7A01G262500.1	Wheat	mitochondrion	68.94	65.62
TraesCS7D01G263300.1	Wheat	mitochondrion	69.44	63.81
HORVU7Hr1G054850.2	Barley	plastid	69.44	63.51
CDY20096	Canola	plastid	46.21	58.28
Bra021584.1-P	Field mustard	plastid	48.23	57.36
GSMUA_AchrUn_...	Banana	mitochondrion	58.08	56.93
GSMUA_Achr6P08230_001	Banana	mitochondrion	58.08	56.79
CDX97626	Canola	plastid	52.02	56.59
CDX98522	Canola	plastid	52.78	56.33
CDX82454	Canola	mitochondrion, plastid	55.05	56.04
GSMUA_Achr10P...	Banana	mitochondrion	61.11	55.25
AT3G15000.1	Thale cress	plastid	54.29	54.43
CDX75801	Canola	mitochondrion, plastid	54.8	54.39
Bra027285.1-P	Field mustard	plastid	55.05	54.23
KRH27318	Soybean	nucleus	48.99	53.44
Bra001578.1-P	Field mustard	plastid	49.75	53.1
Solyc10g007180.2.1	Tomato	plastid	52.27	52.94
KRH21995	Soybean	plastid	53.03	52.37
PGSC0003DMT400039805	Potato	plastid	52.27	51.36
VIT_19s0014g01550.t01	Wine grape	plastid	54.29	51.07
PGSC0003DMT400054809	Potato	mitochondrion	52.27	50.37
Solyc12g014230.1.1	Tomato	nucleus	52.53	48.48
Os06t0116600-01	Rice	mitochondrion	19.95	47.88
Os03t0581600-01	Rice	mitochondrion	27.02	46.93
CDY32326	Canola	cytosol	39.9	44.76
AT1G53260.1	Thale cress	cytosol	29.04	42.44
Os08t0139100-01	Rice	plastid	19.7	34.06
OQU89756	Sorghum	plastid	34.09	31.54
Os11t0216400-01	Rice	mitochondrion	22.73	24.06

Protein Annotations

EMBL:AK106007	EnsemblPlants:Os09t0509000-01	EnsemblPlantsGene:Os09g0509000	EntrezGene:4347529	GO:GO:0006139	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016554	PANTHER:PTHR31346	PANTHER:PTHR31346:SF4	ProteinID:BAF25539.1
ProteinID:BAT08889.1	RefSeq:XP_015612485.1	SEG:seg	SignalP:SignalP-noTM	UniParc:UPI0000DD9800	UniProt:Q0J0H6
MapMan:16.12.5.1	:	:	:	:	:

Description

Similar to DAG protein. (Os09t0509000-01)

Coordinates

chr9:-:19737197..19740265

Molecular Weight (calculated)

42935.4 Da

IEP (calculated)

8.502

GRAVY (calculated)

-0.998

Length

396 amino acids

Sequence
(BLAST)

001: MASASRFLLL SRLPAAAASS TSRLLRPLSA AGSLLPAALA PSAPRAAAAA ARCFATQPAT SSLRDSSPNW SNRPPKETIL LDGCDFEHWL VVVEPPPGDP
101: SNPEPTRDEI IDGYIKTLAQ VVGSEEEARH KIYSVSTRHY FAFGALVSEE LSYKLKELPK VRWVLPDSYL DVRNKDYGGE PFINGEAVPY DPKYHEEWVR
201: NNARANERSR RNDRPRNFDR SRNFERRREN MQNFQNRDVP PGQGFNSPPP PGQGPVPPRD APPMHHAQGN VPPPPPPNAG PPNYQPHAPN PQGYTNYQQG
301: GAPGYQGGPP GYQGSNQGYQ GPPPPPPSAY QGNNPGYQGG GPGYQGGNPP PYQGGNPGYA PGYHGQGGNP SYQQGGDNYN AGVPAYERDG QGRNYQ

Best Arabidopsis Sequence Match ( AT3G15000.1 )
(BLAST)

001: MATHTISRSI LCRPAKSLSF LFTRSFASSA PLAKSPASSL LSRSRPLVAA FSSVFRGGLV SVKGLSTQAT SSSLNDPNPN WSNRPPKETI LLDGCDFEHW
101: LVVVEPPQGE PTRDEIIDSY IKTLAQIVGS EDEARMKIYS VSTRCYYAFG ALVSEDLSHK LKELSNVRWV LPDSYLDVRN KDYGGEPFID GKAVPYDPKY
201: HEEWIRNNAR ANERNRRNDR PRNNDRSRNF ERRRENMAGG PPPQRPPMGG PPPPPHIGGS APPPPHMGGS APPPPHMGQN YGPPPPNNMG GPRHPPPYGA
301: PPQNNMGGPR PPQNYGGTPP PNYGGAPPAN NMGGAPPPNY GGGPPPQYGA VPPPQYGGAP PQNNNYQQQG SGMQQPQYQN NYPPNRDGSG NPYQG

Arabidopsis Description

MORF8Multiple organellar RNA editing factor 8, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9LKA5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.