Factsheet for Bra021584.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

mitochondrion 7
plastid 4

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra009045.1-P
Bra025315.1-P
Bra031892.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G15000.1	Bra025315.1-P	AT3G27960.1	21798944
AT3G15000.1	Bra009045.1-P	AT5G10270.1	12678503
AT3G15000.1	Bra031892.1-P	AT5G64960.1	12678503

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY20096	Canola	plastid	81.98	86.94
CDY32326	Canola	cytosol	75.68	71.39
Bra001578.1-P	Field mustard	plastid	78.38	70.35
Bra027285.1-P	Field mustard	plastid	84.08	69.65
AT3G15000.1	Thale cress	plastid	78.38	66.08
VIT_19s0014g01550.t01	Wine grape	plastid	64.56	51.07
TraesCS5B01G290000.1	Wheat	mitochondrion, plastid	51.05	50.45
KRH27318	Soybean	nucleus	54.35	49.86
Os09t0509000-01	Rice	plastid	57.36	48.23
KRH21995	Soybean	plastid	57.96	48.13
EER92766	Sorghum	mitochondrion	55.56	47.68
Solyc10g007180.2.1	Tomato	plastid	55.86	47.57
Os09t0132600-01	Rice	mitochondrion	56.46	47.24
TraesCS5B01G289900.1	Wheat	nucleus	56.76	46.9
TraesCS5D01G298300.2	Wheat	mitochondrion	56.46	46.77
PGSC0003DMT400039805	Potato	plastid	56.46	46.65
HORVU5Hr1G077020.3	Barley	mitochondrion	56.46	46.19
TraesCS5A01G291000.1	Wheat	mitochondrion	54.95	45.98
EER92767	Sorghum	mitochondrion	47.45	45.53
PGSC0003DMT400054809	Potato	mitochondrion	56.16	45.5
Solyc12g014230.1.1	Tomato	nucleus	57.06	44.29
Bra001218.1-P	Field mustard	cytosol	18.62	43.97
Zm00001d048291_P001	Maize	mitochondrion	53.45	43.41
TraesCS7B01G160200.1	Wheat	mitochondrion	54.05	43.27
TraesCS7A01G262500.1	Wheat	mitochondrion	53.45	42.79
Bra040292.1-P	Field mustard	mitochondrion, plastid	31.53	42.51
HORVU7Hr1G054850.2	Barley	plastid	54.35	41.8
TraesCS7D01G263300.1	Wheat	mitochondrion	54.05	41.76
GSMUA_AchrUn_...	Banana	mitochondrion	49.25	40.59
GSMUA_Achr6P08230_001	Banana	mitochondrion	48.95	40.25
GSMUA_Achr10P...	Banana	mitochondrion	52.55	39.95
Bra016051.1-P	Field mustard	mitochondrion	21.62	39.34
Bra003876.1-P	Field mustard	mitochondrion	21.92	38.42
Bra017328.1-P	Field mustard	cytosol	21.32	38.17
Bra017613.1-P	Field mustard	plastid	7.21	35.29
Bra021852.1-P	Field mustard	plastid	22.22	33.33
Bra005495.1-P	Field mustard	plastid	22.82	33.04
Bra036402.1-P	Field mustard	mitochondrion, plastid	21.92	32.74
Bra005357.1-P	Field mustard	plastid	22.82	32.48
OQU89756	Sorghum	plastid	36.04	28.04
Bra023005.1-P	Field mustard	endoplasmic reticulum	7.51	26.88
Bra016835.1-P	Field mustard	plastid	18.62	26.72
Bra019853.1-P	Field mustard	plastid	18.32	22.68
Bra013439.1-P	Field mustard	mitochondrion	25.83	22.34
Bra012522.1-P	Field mustard	mitochondrion, plastid	24.92	21.39
Bra025105.1-P	Field mustard	mitochondrion	23.72	10.78

Protein Annotations

EnsemblPlants:Bra021584.1	EnsemblPlants:Bra021584.1-P	EnsemblPlantsGene:Bra021584	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016554	PANTHER:PTHR31346	PANTHER:PTHR31346:SF4	SEG:seg	UniParc:UPI0002544188
UniProt:M4DYI8	MapMan:16.12.5.1	:	:	:	:

Description

AT3G15000 (E=3e-079) | LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: plastid developmental protein DAG, putative (TAIR:AT3G06790.2); Has 50779 Blast hits to 24732 proteins in 941 species: Archae - 10; Bacteria - 4862; Metazoa - 25623; Fungi - 7071; Plants - 6957; Viruses - 900; Other Eukaryotes - 5356 (source: NCBI BLink).

Coordinates

chrA01:-:24345713..24346944

Molecular Weight (calculated)

36307.4 Da

IEP (calculated)

9.693

GRAVY (calculated)

-0.869

Length

333 amino acids

Sequence
(BLAST)

001: MATRSISRSI PRLLTRSFAS SAPLSKTPAA PSLLSSSRPL AAAALSSVLR GGFVSVKGLS SQATASSLKD PSPNWSNRPP KETILLDGCD FEHWLVVVDP
101: PQGDLTRDEI IDGYIKTLAQ IVGGEEEARM KIYSVSHRCY FAFGALVSED LSHKLKELPN VRWVLPDSYL DVRNKDYGGE PFIDGRAVPY DYKYHEEWIR
201: NNARANDKNK RNDHRPRNFN KRRDNMSGGS PPMGGPPPPQ NYGAPPPPPN NMGGQRPPPN FGGAPPQNYM GGQRPPPNYG GAPLQNNMGG GGPPPNAGWS
301: GNNYQQQSGG MQQPQYQNNY PPNRDGSGNP YQG

Best Arabidopsis Sequence Match ( AT3G15000.1 )
(BLAST)

001: MATHTISRSI LCRPAKSLSF LFTRSFASSA PLAKSPASSL LSRSRPLVAA FSSVFRGGLV SVKGLSTQAT SSSLNDPNPN WSNRPPKETI LLDGCDFEHW
101: LVVVEPPQGE PTRDEIIDSY IKTLAQIVGS EDEARMKIYS VSTRCYYAFG ALVSEDLSHK LKELSNVRWV LPDSYLDVRN KDYGGEPFID GKAVPYDPKY
201: HEEWIRNNAR ANERNRRNDR PRNNDRSRNF ERRRENMAGG PPPQRPPMGG PPPPPHIGGS APPPPHMGGS APPPPHMGQN YGPPPPNNMG GPRHPPPYGA
301: PPQNNMGGPR PPQNYGGTPP PNYGGAPPAN NMGGAPPPNY GGGPPPQYGA VPPPQYGGAP PQNNNYQQQG SGMQQPQYQN NYPPNRDGSG NPYQG

Arabidopsis Description

MORF8Multiple organellar RNA editing factor 8, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9LKA5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.