Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 6
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU6Hr1G069310.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G15000.1 | HORVU6Hr1G069310.1 | AT3G27960.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G289900.1 | Wheat | nucleus | 94.35 | 95.29 |
| TraesCS5A01G291000.1 | Wheat | mitochondrion | 92.87 | 94.97 |
| TraesCS5D01G298300.2 | Wheat | mitochondrion | 93.37 | 94.53 |
| HORVU7Hr1G054850.2 | Barley | plastid | 66.09 | 62.12 |
| CDY20096 | Canola | plastid | 44.23 | 57.32 |
| Bra021584.1-P | Field mustard | plastid | 46.19 | 56.46 |
| CDX97626 | Canola | plastid | 49.14 | 54.95 |
| GSMUA_Achr6P08230_001 | Banana | mitochondrion | 54.55 | 54.81 |
| CDX82454 | Canola | mitochondrion, plastid | 52.33 | 54.76 |
| CDX98522 | Canola | plastid | 49.63 | 54.45 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 53.81 | 54.21 |
| CDX75801 | Canola | mitochondrion, plastid | 52.83 | 53.88 |
| GSMUA_Achr10P... | Banana | mitochondrion | 57.49 | 53.42 |
| Solyc10g007180.2.1 | Tomato | plastid | 51.11 | 53.2 |
| AT3G15000.1 | Thale cress | plastid | 51.6 | 53.16 |
| Bra027285.1-P | Field mustard | plastid | 52.33 | 52.99 |
| Bra001578.1-P | Field mustard | plastid | 46.93 | 51.48 |
| PGSC0003DMT400039805 | Potato | plastid | 50.86 | 51.36 |
| KRH27318 | Soybean | nucleus | 45.7 | 51.24 |
| PGSC0003DMT400054809 | Potato | mitochondrion | 51.35 | 50.85 |
| VIT_19s0014g01550.t01 | Wine grape | plastid | 52.09 | 50.36 |
| KRH21995 | Soybean | plastid | 48.65 | 49.38 |
| Solyc12g014230.1.1 | Tomato | nucleus | 51.35 | 48.72 |
| HORVU0Hr1G032330.2 | Barley | cytosol | 12.29 | 45.87 |
| CDY32326 | Canola | cytosol | 37.59 | 43.34 |
| AT1G53260.1 | Thale cress | cytosol | 27.76 | 41.7 |
| HORVU6Hr1G077460.3 | Barley | plastid | 26.54 | 40.75 |
| HORVU7Hr1G008880.2 | Barley | plastid | 21.62 | 36.67 |
| HORVU5Hr1G072150.9 | Barley | mitochondrion | 14.0 | 33.14 |
| HORVU7Hr1G073170.2 | Barley | plastid | 20.15 | 32.41 |
| HORVU6Hr1G002030.1 | Barley | plastid | 19.66 | 31.13 |
| HORVU1Hr1G057120.1 | Barley | plastid | 11.3 | 30.07 |
| HORVU4Hr1G016440.1 | Barley | mitochondrion, plastid | 23.83 | 22.56 |
| HORVU2Hr1G040170.17 | Barley | mitochondrion | 14.5 | 21.61 |
Protein Annotations
| EnsemblPlants:HORVU5Hr1G077020.3 | EnsemblPlantsGene:HORVU5Hr1G077020 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016554 | PANTHER:PTHR31346 | PANTHER:PTHR31346:SF4 | SEG:seg | UniParc:UPI000B470830 | UniProt:A0A287RV41 |
| MapMan:16.12.5.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr5H:+:552509011..552512835
Molecular Weight (calculated)
43665.3 Da
IEP (calculated)
8.927
GRAVY (calculated)
-0.954
Length
407 amino acids
Sequence
(BLAST)
(BLAST)
001: MASASRALLL SRASPLHAAA SRFLRPLAAA GSLLPAALVP SHAAAPWAAA RRFATQPANS SLRDSSPNWS NRPPKETILL DGCDFEHWLV VMEPPPGDGA
101: NPDVTRDEII DGYIKTLAQV VGSEDEARMK IYSVSTRHYF AFGALVSEEL SYKLKELPKV RWVLPDSYLD VRNKDYGGEP FIDGQAVPYD PKYHEEWVRN
201: NARANERSRR NDRPRNFDRS RNFERRRENT QAYQSGPAPP GQSQMPPHDA APPRRPPQGP PPPSGAPPNY QSHAPNPQAG YVPGGGPNYQ NAPPPPGYQG
301: APTPGYQAGN QGYQGNPGGN MQNGPGPAYL SNNPGYHQGG GPGVNPPPPF AGGNQPPPYQ GSGPSYGGGA PDYQGQPGNP GYQGGGNYNN AAPPPYEGRD
401: GPGRNYQ
101: NPDVTRDEII DGYIKTLAQV VGSEDEARMK IYSVSTRHYF AFGALVSEEL SYKLKELPKV RWVLPDSYLD VRNKDYGGEP FIDGQAVPYD PKYHEEWVRN
201: NARANERSRR NDRPRNFDRS RNFERRRENT QAYQSGPAPP GQSQMPPHDA APPRRPPQGP PPPSGAPPNY QSHAPNPQAG YVPGGGPNYQ NAPPPPGYQG
301: APTPGYQAGN QGYQGNPGGN MQNGPGPAYL SNNPGYHQGG GPGVNPPPPF AGGNQPPPYQ GSGPSYGGGA PDYQGQPGNP GYQGGGNYNN AAPPPYEGRD
401: GPGRNYQ
001: MARIIRRPLN LTAAVRFRLS PLSPFSGNSG SINSETTSWS ELIRVPSLVE GCDYKHWLVL MKPPNGYPTR NHIVQSFVET LAMALGSEEE AKRSIYSVST
101: KYYYAFGCRI HEPLTYKIRS LPDVKWVLPD SFIVDGDNRY GGEPFVDGEV VPYDEKYHAD WLRDQTDEDA KSGVVKKKHR RKRKKKLI
101: KYYYAFGCRI HEPLTYKIRS LPDVKWVLPD SFIVDGDNRY GGEPFVDGEV VPYDEKYHAD WLRDQTDEDA KSGVVKKKHR RKRKKKLI
Arabidopsis Description
Plastid developmental protein DAG [Source:UniProtKB/TrEMBL;Acc:F4IDD2]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.