Factsheet for HORVU7Hr1G054850.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU6Hr1G069310.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G15000.1	HORVU6Hr1G069310.1	AT3G27960.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G160200.1	Wheat	mitochondrion	92.15	95.91
TraesCS7A01G262500.1	Wheat	mitochondrion	90.99	94.71
TraesCS7D01G263300.1	Wheat	mitochondrion	92.15	92.58
EER92766	Sorghum	mitochondrion	66.97	74.74
Os09t0509000-01	Rice	plastid	63.51	69.44
Os09t0132600-01	Rice	mitochondrion	62.59	68.09
Zm00001d048291_P001	Maize	mitochondrion	64.43	68.05
HORVU5Hr1G077020.3	Barley	mitochondrion	62.12	66.09
CDY20096	Canola	plastid	39.95	55.1
GSMUA_Achr6P08230_001	Banana	mitochondrion	51.04	54.57
GSMUA_AchrUn_...	Banana	mitochondrion	50.81	54.46
Bra021584.1-P	Field mustard	plastid	41.8	54.35
CDX97626	Canola	plastid	45.5	54.12
CDX98522	Canola	plastid	45.96	53.64
GSMUA_Achr10P...	Banana	mitochondrion	53.81	53.2
CDX82454	Canola	mitochondrion, plastid	46.42	51.67
Bra027285.1-P	Field mustard	plastid	47.11	50.75
KRH27318	Soybean	nucleus	42.49	50.69
CDX75801	Canola	mitochondrion, plastid	46.19	50.13
KRH21995	Soybean	plastid	45.73	49.38
AT3G15000.1	Thale cress	plastid	45.03	49.37
Solyc10g007180.2.1	Tomato	plastid	44.34	49.1
Bra001578.1-P	Field mustard	plastid	41.57	48.52
PGSC0003DMT400039805	Potato	plastid	45.03	48.39
HORVU0Hr1G032330.2	Barley	cytosol	12.01	47.71
VIT_19s0014g01550.t01	Wine grape	plastid	45.73	47.03
PGSC0003DMT400054809	Potato	mitochondrion	44.57	46.96
Solyc12g014230.1.1	Tomato	nucleus	45.5	45.92
HORVU6Hr1G077460.3	Barley	plastid	25.17	41.13
CDY32326	Canola	cytosol	33.26	40.79
AT1G53260.1	Thale cress	cytosol	24.48	39.11
HORVU7Hr1G008880.2	Barley	plastid	20.32	36.67
HORVU5Hr1G072150.9	Barley	mitochondrion	12.93	32.56
HORVU6Hr1G002030.1	Barley	plastid	19.17	32.3
HORVU7Hr1G073170.2	Barley	plastid	18.48	31.62
HORVU1Hr1G057120.1	Barley	plastid	10.39	29.41
HORVU4Hr1G016440.1	Barley	mitochondrion, plastid	21.48	21.63
HORVU2Hr1G040170.17	Barley	mitochondrion	13.39	21.25

Protein Annotations

EnsemblPlants:HORVU7Hr1G054850.2	EnsemblPlantsGene:HORVU7Hr1G054850	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016554	PANTHER:PTHR31346	PANTHER:PTHR31346:SF4	SEG:seg	UniParc:UPI000B46BC03	UniProt:A0A287WJT8
MapMan:16.12.5.1	:	:	:	:	:

Description

No Description!

Coordinates

chrchr7H:+:222085959..222089913

Molecular Weight (calculated)

46153.6 Da

IEP (calculated)

9.217

GRAVY (calculated)

-0.830

Length

433 amino acids

Sequence
(BLAST)

001: SPVSSSSPTH LLGFLSPMAM ASRAVLLSRL SPLPAAASRF LLRPLAAAAS LLPAATSPVP AAARGAVRCF ATQPATSSLR DNSPNWSNRP PKETILLDGC
101: DFEHWLVVME PPAGDAANPD VTRDEIIDSY IKTLAQVVGS EQEARQKIYS VSTRHYFAFG ALVSEELSYK LKELPKVRWV LPDSYLDVRN KDYGGEPFIG
201: GEAVPYDPKY HEEWVRNNAR ANDRSRRNDR PRNFDRSRNF ERRRENMQNF QNRDAPPGQQ GFNGPPPGQN PGGMPPPPPP SQNRGNVPPP YTPGGPSNYQ
301: PQMQNPQAAY TPGGAPQMPN PQTGYAPGGA PQMPNPQTGY TPGGAPHMPN PQAGYMPSGA SNHQQGGQAG YQSGPAGHQG GNQVYPGGNL PGGPGPAHSG
401: SSPGYQGGNA PPREGHGYPG GYNSTAPGGY NQQ

Best Arabidopsis Sequence Match ( AT3G15000.1 )
(BLAST)

001: MATHTISRSI LCRPAKSLSF LFTRSFASSA PLAKSPASSL LSRSRPLVAA FSSVFRGGLV SVKGLSTQAT SSSLNDPNPN WSNRPPKETI LLDGCDFEHW
101: LVVVEPPQGE PTRDEIIDSY IKTLAQIVGS EDEARMKIYS VSTRCYYAFG ALVSEDLSHK LKELSNVRWV LPDSYLDVRN KDYGGEPFID GKAVPYDPKY
201: HEEWIRNNAR ANERNRRNDR PRNNDRSRNF ERRRENMAGG PPPQRPPMGG PPPPPHIGGS APPPPHMGGS APPPPHMGQN YGPPPPNNMG GPRHPPPYGA
301: PPQNNMGGPR PPQNYGGTPP PNYGGAPPAN NMGGAPPPNY GGGPPPQYGA VPPPQYGGAP PQNNNYQQQG SGMQQPQYQN NYPPNRDGSG NPYQG

Arabidopsis Description

MORF8Multiple organellar RNA editing factor 8, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9LKA5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.