Factsheet for TraesCS7B01G160200.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS6A01G274500.1
TraesCS6B01G302000.1
TraesCS6D01G254800.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G15000.1	TraesCS6A01G274500.1	AT3G27960.1	21798944
AT3G15000.1	TraesCS6B01G302000.1	AT3G27960.1	21798944
AT3G15000.1	TraesCS6D01G254800.1	AT3G27960.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G262500.1	Wheat	mitochondrion	96.88	96.88
TraesCS7D01G263300.1	Wheat	mitochondrion	98.08	94.66
HORVU7Hr1G054850.2	Barley	plastid	95.91	92.15
EER92766	Sorghum	mitochondrion	69.95	75.0
Os09t0509000-01	Rice	plastid	66.11	69.44
Os09t0132600-01	Rice	mitochondrion	65.62	68.59
Zm00001d048291_P001	Maize	mitochondrion	66.83	67.8
TraesCS5B01G289900.1	Wheat	nucleus	64.66	66.75
TraesCS5B01G290000.1	Wheat	mitochondrion, plastid	53.61	66.17
GSMUA_Achr6P08230_001	Banana	mitochondrion	53.12	54.57
CDX97626	Canola	plastid	47.6	54.4
GSMUA_AchrUn_...	Banana	mitochondrion	52.64	54.21
CDY20096	Canola	plastid	40.87	54.14
Bra021584.1-P	Field mustard	plastid	43.27	54.05
CDX98522	Canola	plastid	48.08	53.91
GSMUA_Achr10P...	Banana	mitochondrion	55.29	52.51
CDX82454	Canola	mitochondrion, plastid	48.56	51.93
Bra027285.1-P	Field mustard	plastid	49.28	50.99
KRH27318	Soybean	nucleus	44.47	50.96
CDX75801	Canola	mitochondrion, plastid	48.56	50.63
AT3G15000.1	Thale cress	plastid	47.36	49.87
KRH21995	Soybean	plastid	47.84	49.63
Solyc10g007180.2.1	Tomato	plastid	46.63	49.62
Bra001578.1-P	Field mustard	plastid	43.51	48.79
PGSC0003DMT400039805	Potato	plastid	47.12	48.64
PGSC0003DMT400054809	Potato	mitochondrion	46.88	47.45
VIT_19s0014g01550.t01	Wine grape	plastid	47.84	47.27
Solyc12g014230.1.1	Tomato	nucleus	47.6	46.15
TraesCS6B01G344700.2	Wheat	mitochondrion	26.92	44.27
CDY32326	Canola	cytosol	35.1	41.36
AT1G53260.1	Thale cress	cytosol	25.48	39.11
TraesCS2B01G457700.1	Wheat	plastid	19.71	38.32
TraesCS7B01G207300.1	Wheat	plastid	19.23	35.09
TraesCS6B01G010000.1	Wheat	plastid	19.95	33.07
TraesCS4B01G107700.2	Wheat	mitochondrion	21.88	21.02

Protein Annotations

EnsemblPlants:TraesCS7B01G160200.1

EnsemblPlantsGene:TraesCS7B01G160200

PANTHER:PTHR31346

PANTHER:PTHR31346:SF4

SEG:seg

MapMan:16.12.5.1

Description

No Description!

Coordinates

chr7B:-:218815853..218821113

Molecular Weight (calculated)

44626.8 Da

IEP (calculated)

9.464

GRAVY (calculated)

-0.858

Length

416 amino acids

Sequence
(BLAST)

001: MAMASRAVLL SRLSPLPAAA SRFLLRPLAA AASLLPAATS PVPAAARGAV RCFATQPATS SLRDSSPNWS NRPPKETILL DGCDFEHWLV VMEPPAGDAA
101: NPDVTRDEII DSYIKTLAQV VGSEQEARQK IYSVSTRHYF AFGALVSEEL SYKLKELPKV RWVLPDSYLD VRNKDYGGEP FIGGEAVPYD PKYHEEWVRN
201: NARANERSRR SDRPRNFDRS RNFERRRENM QNFQNRDAPP GQQGFNGPPP GQNPGSMPPP PPPSQNRGNV PPPYTPGGPS NYQPQMQNPQ AAYTPGGAPR
301: MLNPQTGHTP GGAPQMPNPQ TGYTPGRAPH MPNQQAGYVP SGASNYQQGG QAGYQGGPAG HQGGNQVYPG GNLPGGPGPA HPGSSPGYQG ANAPPREGYG
401: YPGGYNSSAP GGYNQQ

Best Arabidopsis Sequence Match ( AT3G15000.1 )
(BLAST)

001: MATHTISRSI LCRPAKSLSF LFTRSFASSA PLAKSPASSL LSRSRPLVAA FSSVFRGGLV SVKGLSTQAT SSSLNDPNPN WSNRPPKETI LLDGCDFEHW
101: LVVVEPPQGE PTRDEIIDSY IKTLAQIVGS EDEARMKIYS VSTRCYYAFG ALVSEDLSHK LKELSNVRWV LPDSYLDVRN KDYGGEPFID GKAVPYDPKY
201: HEEWIRNNAR ANERNRRNDR PRNNDRSRNF ERRRENMAGG PPPQRPPMGG PPPPPHIGGS APPPPHMGGS APPPPHMGQN YGPPPPNNMG GPRHPPPYGA
301: PPQNNMGGPR PPQNYGGTPP PNYGGAPPAN NMGGAPPPNY GGGPPPQYGA VPPPQYGGAP PQNNNYQQQG SGMQQPQYQN NYPPNRDGSG NPYQG

Arabidopsis Description

MORF8Multiple organellar RNA editing factor 8, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9LKA5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.