Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 2
- mitochondrion 8
- nucleus 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
Inferred from Arabidopsis experimental PPI
Ath locusA | locusB | Ath locusB | Paper |
---|---|---|---|
AT3G15000.1 | EES05647 | AT3G27960.1 | 21798944 |
AT3G15000.1 | EES15089 | AT5G10270.1 | 12678503 |
AT3G15000.1 | EES15089 | AT5G64960.1 | 12678503 |
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
EER92767 | Sorghum | mitochondrion | 78.09 | 87.32 |
Zm00001d048291_P001 | Maize | mitochondrion | 90.98 | 86.1 |
TraesCS7B01G160200.1 | Wheat | mitochondrion | 75.0 | 69.95 |
TraesCS7A01G262500.1 | Wheat | mitochondrion | 74.74 | 69.71 |
TraesCS7D01G263300.1 | Wheat | mitochondrion | 75.52 | 67.98 |
HORVU7Hr1G054850.2 | Barley | plastid | 74.74 | 66.97 |
GSMUA_Achr6P08230_001 | Banana | mitochondrion | 61.34 | 58.77 |
CDX97626 | Canola | plastid | 54.64 | 58.24 |
CDX98522 | Canola | plastid | 55.41 | 57.95 |
CDY20096 | Canola | plastid | 45.36 | 56.05 |
Bra021584.1-P | Field mustard | plastid | 47.68 | 55.56 |
CDX82454 | Canola | mitochondrion, plastid | 55.41 | 55.27 |
GSMUA_AchrUn_... | Banana | mitochondrion | 57.47 | 55.2 |
GSMUA_Achr10P... | Banana | mitochondrion | 61.6 | 54.57 |
CDX75801 | Canola | mitochondrion, plastid | 55.67 | 54.14 |
Bra027285.1-P | Field mustard | plastid | 55.93 | 53.98 |
Solyc10g007180.2.1 | Tomato | plastid | 53.61 | 53.2 |
AT3G15000.1 | Thale cress | plastid | 53.87 | 52.91 |
KRH27318 | Soybean | nucleus | 49.23 | 52.62 |
Bra001578.1-P | Field mustard | plastid | 50.26 | 52.56 |
KRH21995 | Soybean | plastid | 53.09 | 51.37 |
PGSC0003DMT400039805 | Potato | plastid | 53.35 | 51.36 |
VIT_19s0014g01550.t01 | Wine grape | plastid | 55.67 | 51.31 |
PGSC0003DMT400054809 | Potato | mitochondrion | 53.35 | 50.37 |
Solyc12g014230.1.1 | Tomato | nucleus | 53.87 | 48.72 |
EES12861 | Sorghum | mitochondrion | 29.64 | 47.13 |
CDY32326 | Canola | cytosol | 39.95 | 43.91 |
AT1G53260.1 | Thale cress | cytosol | 28.87 | 41.33 |
EES11377 | Sorghum | mitochondrion, plastid | 21.65 | 38.89 |
EER87743 | Sorghum | mitochondrion | 20.88 | 36.49 |
EES14516 | Sorghum | plastid | 21.13 | 36.44 |
OQU89756 | Sorghum | plastid | 34.54 | 31.31 |
EES08356 | Sorghum | mitochondrion | 23.71 | 20.54 |
Protein Annotations
EnsemblPlants:EER92766 | EnsemblPlantsGene:SORBI_3001G485600 | EntrezGene:8082028 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 |
GO:GO:0009987 | GO:GO:0016554 | PANTHER:PTHR31346 | PANTHER:PTHR31346:SF4 | ProteinID:EER92766 | ProteinID:EER92766.1 |
RefSeq:XP_002465768.1 | SEG:seg | unigene:Sbi.189 | UniParc:UPI0001A82A48 | UniProt:C5WVV4 | MapMan:16.12.5.1 |
Description
hypothetical protein
Coordinates
chr1:+:75642366..75646001
Molecular Weight (calculated)
41537.1 Da
IEP (calculated)
8.797
GRAVY (calculated)
-0.940
Length
388 amino acids
Sequence
(BLAST)
(BLAST)
001: MASASRALLL SRALQAGAAS RRVPTLLRPL AAAASLLPAA AAAAAPGAGV RCFATQPATS SLRDSSPNWS NRPPKETILL DGCDFEHWLV VMEPPPGDAS
101: NPDITRDEII DSYIKTLAQI VGSEEEARQK IYSVSTRHYF AFGALVSEEL SYKLKEMPKV RWVLPDSYLD VKNKDYGGEP FINGEAVPYD PKYHEEWVRN
201: NARANERSRR NDRPRNFDRS RNFERRRENM QNFQNRDGPP AQGFSGPPPP PGQNQMPPQH VQGNMPPPPP HAGGGQPNYQ PQMPNPQAGY NPGGAPHYQQ
301: GGAPGYQGGP PGYQGGNQGY QGNPGPAYQG GNPGYQGGPP GYPGGNPPPP PPYQGGNPNA PPYPGGGNPG YPGGSPGYQG QGGNSNFQ
101: NPDITRDEII DSYIKTLAQI VGSEEEARQK IYSVSTRHYF AFGALVSEEL SYKLKEMPKV RWVLPDSYLD VKNKDYGGEP FINGEAVPYD PKYHEEWVRN
201: NARANERSRR NDRPRNFDRS RNFERRRENM QNFQNRDGPP AQGFSGPPPP PGQNQMPPQH VQGNMPPPPP HAGGGQPNYQ PQMPNPQAGY NPGGAPHYQQ
301: GGAPGYQGGP PGYQGGNQGY QGNPGPAYQG GNPGYQGGPP GYPGGNPPPP PPYQGGNPNA PPYPGGGNPG YPGGSPGYQG QGGNSNFQ
001: MATHTISRSI LCRPAKSLSF LFTRSFASSA PLAKSPASSL LSRSRPLVAA FSSVFRGGLV SVKGLSTQAT SSSLNDPNPN WSNRPPKETI LLDGCDFEHW
101: LVVVEPPQGE PTRDEIIDSY IKTLAQIVGS EDEARMKIYS VSTRCYYAFG ALVSEDLSHK LKELSNVRWV LPDSYLDVRN KDYGGEPFID GKAVPYDPKY
201: HEEWIRNNAR ANERNRRNDR PRNNDRSRNF ERRRENMAGG PPPQRPPMGG PPPPPHIGGS APPPPHMGGS APPPPHMGQN YGPPPPNNMG GPRHPPPYGA
301: PPQNNMGGPR PPQNYGGTPP PNYGGAPPAN NMGGAPPPNY GGGPPPQYGA VPPPQYGGAP PQNNNYQQQG SGMQQPQYQN NYPPNRDGSG NPYQG
101: LVVVEPPQGE PTRDEIIDSY IKTLAQIVGS EDEARMKIYS VSTRCYYAFG ALVSEDLSHK LKELSNVRWV LPDSYLDVRN KDYGGEPFID GKAVPYDPKY
201: HEEWIRNNAR ANERNRRNDR PRNNDRSRNF ERRRENMAGG PPPQRPPMGG PPPPPHIGGS APPPPHMGGS APPPPHMGQN YGPPPPNNMG GPRHPPPYGA
301: PPQNNMGGPR PPQNYGGTPP PNYGGAPPAN NMGGAPPPNY GGGPPPQYGA VPPPQYGGAP PQNNNYQQQG SGMQQPQYQN NYPPNRDGSG NPYQG
Arabidopsis Description
MORF8Multiple organellar RNA editing factor 8, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9LKA5]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.