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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • plastid 2
  • mitochondrion 8
  • nucleus 1
PPI

Inferred distinct locusB in Crop

locusBlocations
EES05647
EES15089

Inferred from Arabidopsis experimental PPI

Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EER92767 Sorghum mitochondrion 78.09 87.32
Zm00001d048291_P001 Maize mitochondrion 90.98 86.1
TraesCS7B01G160200.1 Wheat mitochondrion 75.0 69.95
TraesCS7A01G262500.1 Wheat mitochondrion 74.74 69.71
TraesCS7D01G263300.1 Wheat mitochondrion 75.52 67.98
HORVU7Hr1G054850.2 Barley plastid 74.74 66.97
GSMUA_Achr6P08230_001 Banana mitochondrion 61.34 58.77
CDX97626 Canola plastid 54.64 58.24
CDX98522 Canola plastid 55.41 57.95
CDY20096 Canola plastid 45.36 56.05
Bra021584.1-P Field mustard plastid 47.68 55.56
CDX82454 Canola mitochondrion, plastid 55.41 55.27
GSMUA_AchrUn_... Banana mitochondrion 57.47 55.2
GSMUA_Achr10P... Banana mitochondrion 61.6 54.57
CDX75801 Canola mitochondrion, plastid 55.67 54.14
Bra027285.1-P Field mustard plastid 55.93 53.98
Solyc10g007180.2.1 Tomato plastid 53.61 53.2
AT3G15000.1 Thale cress plastid 53.87 52.91
KRH27318 Soybean nucleus 49.23 52.62
Bra001578.1-P Field mustard plastid 50.26 52.56
KRH21995 Soybean plastid 53.09 51.37
PGSC0003DMT400039805 Potato plastid 53.35 51.36
VIT_19s0014g01550.t01 Wine grape plastid 55.67 51.31
PGSC0003DMT400054809 Potato mitochondrion 53.35 50.37
Solyc12g014230.1.1 Tomato nucleus 53.87 48.72
EES12861 Sorghum mitochondrion 29.64 47.13
CDY32326 Canola cytosol 39.95 43.91
AT1G53260.1 Thale cress cytosol 28.87 41.33
EES11377 Sorghum mitochondrion, plastid 21.65 38.89
EER87743 Sorghum mitochondrion 20.88 36.49
EES14516 Sorghum plastid 21.13 36.44
OQU89756 Sorghum plastid 34.54 31.31
EES08356 Sorghum mitochondrion 23.71 20.54
Protein Annotations
EnsemblPlants:EER92766EnsemblPlantsGene:SORBI_3001G485600EntrezGene:8082028GO:GO:0006139GO:GO:0008150GO:GO:0008152
GO:GO:0009987GO:GO:0016554PANTHER:PTHR31346PANTHER:PTHR31346:SF4ProteinID:EER92766ProteinID:EER92766.1
RefSeq:XP_002465768.1SEG:segunigene:Sbi.189UniParc:UPI0001A82A48UniProt:C5WVV4MapMan:16.12.5.1
Description
hypothetical protein
Coordinates
chr1:+:75642366..75646001
Molecular Weight (calculated)
41537.1 Da
IEP (calculated)
8.797
GRAVY (calculated)
-0.940
Length
388 amino acids
Sequence
(BLAST)
001: MASASRALLL SRALQAGAAS RRVPTLLRPL AAAASLLPAA AAAAAPGAGV RCFATQPATS SLRDSSPNWS NRPPKETILL DGCDFEHWLV VMEPPPGDAS
101: NPDITRDEII DSYIKTLAQI VGSEEEARQK IYSVSTRHYF AFGALVSEEL SYKLKEMPKV RWVLPDSYLD VKNKDYGGEP FINGEAVPYD PKYHEEWVRN
201: NARANERSRR NDRPRNFDRS RNFERRRENM QNFQNRDGPP AQGFSGPPPP PGQNQMPPQH VQGNMPPPPP HAGGGQPNYQ PQMPNPQAGY NPGGAPHYQQ
301: GGAPGYQGGP PGYQGGNQGY QGNPGPAYQG GNPGYQGGPP GYPGGNPPPP PPYQGGNPNA PPYPGGGNPG YPGGSPGYQG QGGNSNFQ
Best Arabidopsis Sequence Match ( AT3G15000.1 )
(BLAST)
001: MATHTISRSI LCRPAKSLSF LFTRSFASSA PLAKSPASSL LSRSRPLVAA FSSVFRGGLV SVKGLSTQAT SSSLNDPNPN WSNRPPKETI LLDGCDFEHW
101: LVVVEPPQGE PTRDEIIDSY IKTLAQIVGS EDEARMKIYS VSTRCYYAFG ALVSEDLSHK LKELSNVRWV LPDSYLDVRN KDYGGEPFID GKAVPYDPKY
201: HEEWIRNNAR ANERNRRNDR PRNNDRSRNF ERRRENMAGG PPPQRPPMGG PPPPPHIGGS APPPPHMGGS APPPPHMGQN YGPPPPNNMG GPRHPPPYGA
301: PPQNNMGGPR PPQNYGGTPP PNYGGAPPAN NMGGAPPPNY GGGPPPQYGA VPPPQYGGAP PQNNNYQQQG SGMQQPQYQN NYPPNRDGSG NPYQG
Arabidopsis Description
MORF8Multiple organellar RNA editing factor 8, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9LKA5]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.