Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 6
- extracellular 1
- golgi 1
- plasma membrane 1
- endoplasmic reticulum 1
- vacuole 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| GSMUA_Achr10P... | |
| GSMUA_Achr2P09630_001 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G15000.1 | GSMUA_Achr10P... | AT3G27960.1 | 21798944 |
| AT3G15000.1 | GSMUA_Achr2P09630_001 | AT3G27960.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_AchrUn_... | Banana | mitochondrion | 74.32 | 74.5 |
| GSMUA_Achr10P... | Banana | mitochondrion | 72.35 | 66.89 |
| EER92766 | Sorghum | mitochondrion | 58.77 | 61.34 |
| Os09t0509000-01 | Rice | plastid | 56.79 | 58.08 |
| Os09t0132600-01 | Rice | mitochondrion | 56.54 | 57.54 |
| EER92767 | Sorghum | mitochondrion | 48.4 | 56.48 |
| Zm00001d048291_P001 | Maize | mitochondrion | 57.04 | 56.34 |
| HORVU5Hr1G077020.3 | Barley | mitochondrion | 54.81 | 54.55 |
| TraesCS5B01G289900.1 | Wheat | nucleus | 54.07 | 54.34 |
| TraesCS5D01G298300.2 | Wheat | mitochondrion | 53.58 | 53.98 |
| TraesCS5A01G291000.1 | Wheat | mitochondrion | 52.84 | 53.77 |
| TraesCS5B01G290000.1 | Wheat | mitochondrion, plastid | 44.69 | 53.71 |
| TraesCS7B01G160200.1 | Wheat | mitochondrion | 54.57 | 53.12 |
| TraesCS7A01G262500.1 | Wheat | mitochondrion | 54.07 | 52.64 |
| TraesCS7D01G263300.1 | Wheat | mitochondrion | 55.06 | 51.74 |
| HORVU7Hr1G054850.2 | Barley | plastid | 54.57 | 51.04 |
| KRH27318 | Soybean | nucleus | 44.94 | 50.14 |
| Solyc10g007180.2.1 | Tomato | plastid | 48.15 | 49.87 |
| CDX97626 | Canola | plastid | 44.69 | 49.73 |
| Bra021584.1-P | Field mustard | plastid | 40.25 | 48.95 |
| CDX82454 | Canola | mitochondrion, plastid | 46.91 | 48.84 |
| CDX98522 | Canola | plastid | 44.69 | 48.79 |
| PGSC0003DMT400039805 | Potato | plastid | 48.4 | 48.64 |
| CDY20096 | Canola | plastid | 37.53 | 48.41 |
| CDX75801 | Canola | mitochondrion, plastid | 47.41 | 48.12 |
| Bra027285.1-P | Field mustard | plastid | 47.65 | 48.01 |
| PGSC0003DMT400054809 | Potato | mitochondrion | 48.64 | 47.93 |
| VIT_19s0014g01550.t01 | Wine grape | plastid | 49.63 | 47.74 |
| GSMUA_Achr6P01260_001 | Banana | cytosol | 17.28 | 47.62 |
| AT3G15000.1 | Thale cress | plastid | 46.42 | 47.59 |
| KRH21995 | Soybean | plastid | 46.67 | 47.13 |
| GSMUA_Achr4P27580_001 | Banana | cytosol | 17.04 | 46.94 |
| Bra001578.1-P | Field mustard | plastid | 41.73 | 45.55 |
| Solyc12g014230.1.1 | Tomato | nucleus | 47.9 | 45.22 |
| GSMUA_Achr11P... | Banana | mitochondrion | 27.65 | 44.27 |
| GSMUA_Achr8P33150_001 | Banana | cytosol | 14.81 | 43.17 |
| GSMUA_Achr8P22480_001 | Banana | mitochondrion | 27.16 | 42.47 |
| AT1G53260.1 | Thale cress | cytosol | 25.43 | 38.01 |
| CDY32326 | Canola | cytosol | 33.09 | 37.96 |
| GSMUA_Achr2P17930_001 | Banana | mitochondrion, plastid | 20.74 | 32.43 |
| OQU89756 | Sorghum | plastid | 31.85 | 30.14 |
| GSMUA_Achr1P22060_001 | Banana | mitochondrion | 20.49 | 21.28 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr6P08230_001 | EnsemblPlants:GSMUA_Achr6T08230_001 | EnsemblPlantsGene:GSMUA_Achr6G08230_001 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016554 | PANTHER:PTHR31346 | PANTHER:PTHR31346:SF4 | SEG:seg | UniParc:UPI0002969D5C |
| UniProt:M0T572 | MapMan:16.12.5.1 | : | : | : | : |
Description
DAG protein, chloroplast precursor, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr6G08230_001]
Coordinates
chr6:-:5482345..5486967
Molecular Weight (calculated)
44002.0 Da
IEP (calculated)
9.322
GRAVY (calculated)
-0.917
Length
405 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGRTLIAKL HSISLSSRVI SLPLARPSPL LRFRPLLAAA AAFDYPLLRL SSTCGAAGLR CFSTRPTTSS LNDPSPNWSN RPPKETILLD GCDFEHWLVV
101: MEPPDPALTR DEIIDSYIKT LAEVLGSEEE ARMSIYSVST KHYFAFGCKV SEEISYKIKP LSKVRWVLPD SYLDVKNKDY GGEPFIDGKA VPYDPKYHEE
201: WVRNNARAQE RSRRNDRPRN FDRSRNFERR RENMQNFQNR EAPPVPNQEF RNRDTQRTGQ GYPEGPGYQG GGQGYRGGDP GGNMPGGPGY QAGRPGYQGS
301: RPGGYQGGGP GYQGGNPPHQ GGFSGSPSGS PGYQGGNPPY QGGFSVSPSG NLGYQGGNPP YQGGFSGSPS GSSGYQGGAR NYEQGGPGYQ GGPPHQGRDL
401: PGRDQ
101: MEPPDPALTR DEIIDSYIKT LAEVLGSEEE ARMSIYSVST KHYFAFGCKV SEEISYKIKP LSKVRWVLPD SYLDVKNKDY GGEPFIDGKA VPYDPKYHEE
201: WVRNNARAQE RSRRNDRPRN FDRSRNFERR RENMQNFQNR EAPPVPNQEF RNRDTQRTGQ GYPEGPGYQG GGQGYRGGDP GGNMPGGPGY QAGRPGYQGS
301: RPGGYQGGGP GYQGGNPPHQ GGFSGSPSGS PGYQGGNPPY QGGFSVSPSG NLGYQGGNPP YQGGFSGSPS GSSGYQGGAR NYEQGGPGYQ GGPPHQGRDL
401: PGRDQ
001: MATHTISRSI LCRPAKSLSF LFTRSFASSA PLAKSPASSL LSRSRPLVAA FSSVFRGGLV SVKGLSTQAT SSSLNDPNPN WSNRPPKETI LLDGCDFEHW
101: LVVVEPPQGE PTRDEIIDSY IKTLAQIVGS EDEARMKIYS VSTRCYYAFG ALVSEDLSHK LKELSNVRWV LPDSYLDVRN KDYGGEPFID GKAVPYDPKY
201: HEEWIRNNAR ANERNRRNDR PRNNDRSRNF ERRRENMAGG PPPQRPPMGG PPPPPHIGGS APPPPHMGGS APPPPHMGQN YGPPPPNNMG GPRHPPPYGA
301: PPQNNMGGPR PPQNYGGTPP PNYGGAPPAN NMGGAPPPNY GGGPPPQYGA VPPPQYGGAP PQNNNYQQQG SGMQQPQYQN NYPPNRDGSG NPYQG
101: LVVVEPPQGE PTRDEIIDSY IKTLAQIVGS EDEARMKIYS VSTRCYYAFG ALVSEDLSHK LKELSNVRWV LPDSYLDVRN KDYGGEPFID GKAVPYDPKY
201: HEEWIRNNAR ANERNRRNDR PRNNDRSRNF ERRRENMAGG PPPQRPPMGG PPPPPHIGGS APPPPHMGGS APPPPHMGQN YGPPPPNNMG GPRHPPPYGA
301: PPQNNMGGPR PPQNYGGTPP PNYGGAPPAN NMGGAPPPNY GGGPPPQYGA VPPPQYGGAP PQNNNYQQQG SGMQQPQYQN NYPPNRDGSG NPYQG
Arabidopsis Description
MORF8Multiple organellar RNA editing factor 8, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9LKA5]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.