Factsheet for GSMUA_AchrUn_randomP08870_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 7
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr2P09630_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G15000.1	GSMUA_Achr10P...	AT3G27960.1	21798944
AT3G15000.1	GSMUA_Achr2P09630_001	AT3G27960.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P08230_001	Banana	mitochondrion	74.5	74.32
GSMUA_Achr10P...	Banana	mitochondrion	72.52	66.89
Os09t0509000-01	Rice	plastid	56.93	58.08
EER92766	Sorghum	mitochondrion	55.2	57.47
EER92767	Sorghum	mitochondrion	49.01	57.06
Os09t0132600-01	Rice	mitochondrion	55.2	56.03
TraesCS5B01G290000.1	Wheat	mitochondrion, plastid	45.79	54.9
HORVU5Hr1G077020.3	Barley	mitochondrion	54.21	53.81
TraesCS5B01G289900.1	Wheat	nucleus	53.22	53.35
Zm00001d048291_P001	Maize	mitochondrion	53.96	53.17
TraesCS5A01G291000.1	Wheat	mitochondrion	51.98	52.76
TraesCS7B01G160200.1	Wheat	mitochondrion	54.21	52.64
TraesCS5D01G298300.2	Wheat	mitochondrion	52.23	52.49
TraesCS7A01G262500.1	Wheat	mitochondrion	53.71	52.16
TraesCS7D01G263300.1	Wheat	mitochondrion	54.7	51.28
HORVU7Hr1G054850.2	Barley	plastid	54.46	50.81
CDY20096	Canola	plastid	39.11	50.32
CDX97626	Canola	plastid	44.55	49.45
Bra021584.1-P	Field mustard	plastid	40.59	49.25
KRH27318	Soybean	nucleus	44.06	49.04
CDX98522	Canola	plastid	44.55	48.52
CDX82454	Canola	mitochondrion, plastid	46.29	48.07
Solyc10g007180.2.1	Tomato	plastid	46.29	47.83
PGSC0003DMT400039805	Potato	plastid	47.28	47.39
Bra027285.1-P	Field mustard	plastid	47.03	47.26
AT3G15000.1	Thale cress	plastid	46.04	47.09
GSMUA_Achr6P01260_001	Banana	cytosol	17.08	46.94
CDX75801	Canola	mitochondrion, plastid	46.29	46.87
VIT_19s0014g01550.t01	Wine grape	plastid	48.51	46.56
KRH21995	Soybean	plastid	46.04	46.38
GSMUA_Achr4P27580_001	Banana	cytosol	16.83	46.26
PGSC0003DMT400054809	Potato	mitochondrion	46.29	45.5
Solyc12g014230.1.1	Tomato	nucleus	47.77	44.99
Bra001578.1-P	Field mustard	plastid	40.84	44.47
GSMUA_Achr11P...	Banana	mitochondrion	27.23	43.48
GSMUA_Achr8P22480_001	Banana	mitochondrion	26.73	41.7
GSMUA_Achr8P33150_001	Banana	cytosol	14.11	41.01
AT1G53260.1	Thale cress	cytosol	26.24	39.11
CDY32326	Canola	cytosol	33.17	37.96
GSMUA_Achr2P17930_001	Banana	mitochondrion, plastid	20.05	31.27
OQU89756	Sorghum	plastid	31.93	30.14
GSMUA_Achr1P22060_001	Banana	mitochondrion	21.29	22.05

Protein Annotations

EnsemblPlants:GSMUA_AchrUn_randomP08870_001	EnsemblPlants:GSMUA_AchrUn_randomT08870_001	EnsemblPlantsGene:GSMUA_AchrUn_randomG08870_001	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016554	PANTHER:PTHR31346	PANTHER:PTHR31346:SF4	SEG:seg	UniParc:UPI00029563BF
UniProt:M0U7J7	MapMan:16.12.5.1	:	:	:	:

Description

DAG protein, chloroplast precursor, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG08870_001]

Coordinates

chrchrUn_random:+:41049026..41053315

Molecular Weight (calculated)

44446.7 Da

IEP (calculated)

8.898

GRAVY (calculated)

-0.924

Length

404 amino acids

Sequence
(BLAST)

001: MTQRILIAKL HTLCRSSRAL SLPLVCPSPL LRFRPLVAVA TEYPLLRLNS FADASGTRFF STRPTTSSLN DPSPNWSNRP PKETILLDGC DFEHWLVVME
101: PADPSLTRDE IIDSYIKTLS QVLGSEEEAR MSIYSVSTKH YFAFGCKVSE EISYKIKPLP KVRWVLPDSY LDVKNKDYGG EPFIDGTAVP YDPKYHEEWV
201: RNNARAQERS RRNDRPRNFD RSRNFERRRE NMQHFQNREA PPMQNQQEFQ NRDAQNAMPQ NAQSPMPSRD VPPTPNRDPN TMPPPNYTPN AGSSYGGGGQ
301: GYQGGPGYQG GGQGYQGSYP GVNMPSGPGY QGGRPGYQGD SRGYQGGGTA GGNAGGIMPG GSVYQGGSHG GYQGGSSPNY QQGGGPGYQG GAPYQGRDMP
401: GRDQ

Best Arabidopsis Sequence Match ( AT3G15000.1 )
(BLAST)

001: MATHTISRSI LCRPAKSLSF LFTRSFASSA PLAKSPASSL LSRSRPLVAA FSSVFRGGLV SVKGLSTQAT SSSLNDPNPN WSNRPPKETI LLDGCDFEHW
101: LVVVEPPQGE PTRDEIIDSY IKTLAQIVGS EDEARMKIYS VSTRCYYAFG ALVSEDLSHK LKELSNVRWV LPDSYLDVRN KDYGGEPFID GKAVPYDPKY
201: HEEWIRNNAR ANERNRRNDR PRNNDRSRNF ERRRENMAGG PPPQRPPMGG PPPPPHIGGS APPPPHMGGS APPPPHMGQN YGPPPPNNMG GPRHPPPYGA
301: PPQNNMGGPR PPQNYGGTPP PNYGGAPPAN NMGGAPPPNY GGGPPPQYGA VPPPQYGGAP PQNNNYQQQG SGMQQPQYQN NYPPNRDGSG NPYQG

Arabidopsis Description

MORF8Multiple organellar RNA editing factor 8, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9LKA5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.