Factsheet for GSMUA_Achr10P12230_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

extracellular 2
endoplasmic reticulum 3
vacuole 2
plasma membrane 2
golgi 2
mitochondrion 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, secretory
BaCelLo:	secretory
EpiLoc:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	endoplasmic reticulum

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr2P09630_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G15000.1	GSMUA_Achr10P...	AT3G27960.1	21798944
AT3G15000.1	GSMUA_Achr2P09630_001	AT3G27960.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	mitochondrion	66.89	72.52
GSMUA_Achr6P08230_001	Banana	mitochondrion	66.89	72.35
EER92766	Sorghum	mitochondrion	54.57	61.6
Os09t0509000-01	Rice	plastid	55.25	61.11
Os09t0132600-01	Rice	mitochondrion	54.34	59.8
EER92767	Sorghum	mitochondrion	45.66	57.64
TraesCS5B01G289900.1	Wheat	nucleus	52.97	57.57
HORVU5Hr1G077020.3	Barley	mitochondrion	53.42	57.49
Zm00001d048291_P001	Maize	mitochondrion	53.65	57.32
TraesCS5B01G290000.1	Wheat	mitochondrion, plastid	44.06	57.27
TraesCS5D01G298300.2	Wheat	mitochondrion	52.28	56.97
TraesCS5A01G291000.1	Wheat	mitochondrion	51.6	56.78
TraesCS7A01G262500.1	Wheat	mitochondrion	52.51	55.29
TraesCS7B01G160200.1	Wheat	mitochondrion	52.51	55.29
TraesCS7D01G263300.1	Wheat	mitochondrion	53.2	54.06
HORVU7Hr1G054850.2	Barley	plastid	53.2	53.81
CDX97626	Canola	plastid	44.06	53.02
Bra021584.1-P	Field mustard	plastid	39.95	52.55
CDY20096	Canola	plastid	37.67	52.55
KRH27318	Soybean	nucleus	43.38	52.34
CDX98522	Canola	plastid	44.29	52.29
CDX82454	Canola	mitochondrion, plastid	45.66	51.41
Bra027285.1-P	Field mustard	plastid	46.35	50.5
AT3G15000.1	Thale cress	plastid	45.43	50.38
CDX75801	Canola	mitochondrion, plastid	45.66	50.13
VIT_19s0014g01550.t01	Wine grape	plastid	47.95	49.88
KRH21995	Soybean	plastid	45.43	49.63
Solyc10g007180.2.1	Tomato	plastid	43.84	49.1
PGSC0003DMT400039805	Potato	plastid	44.98	48.88
GSMUA_Achr6P01260_001	Banana	cytosol	16.21	48.3
Bra001578.1-P	Field mustard	plastid	40.18	47.44
PGSC0003DMT400054809	Potato	mitochondrion	44.06	46.96
GSMUA_Achr4P27580_001	Banana	cytosol	15.75	46.94
Solyc12g014230.1.1	Tomato	nucleus	44.98	45.92
GSMUA_Achr11P...	Banana	mitochondrion	26.48	45.85
GSMUA_Achr8P22480_001	Banana	mitochondrion	26.26	44.4
GSMUA_Achr8P33150_001	Banana	cytosol	13.01	41.01
CDY32326	Canola	cytosol	32.19	39.94
AT1G53260.1	Thale cress	cytosol	24.43	39.48
GSMUA_Achr2P17930_001	Banana	mitochondrion, plastid	18.72	31.66
OQU89756	Sorghum	plastid	28.77	29.44
GSMUA_Achr1P22060_001	Banana	mitochondrion	20.55	23.08

Protein Annotations

EnsemblPlants:GSMUA_Achr10P12230_001	EnsemblPlants:GSMUA_Achr10T12230_001	EnsemblPlantsGene:GSMUA_Achr10G12230_001	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016554	PANTHER:PTHR31346	PANTHER:PTHR31346:SF4	SEG:seg	UniParc:UPI000296D4D4
UniProt:M0RHJ9	MapMan:16.12.5.1	:	:	:	:

Description

DAG protein, chloroplast precursor, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr10G12230_001]

Coordinates

chr10:-:21308153..21313333

Molecular Weight (calculated)

48131.2 Da

IEP (calculated)

9.480

GRAVY (calculated)

-0.839

Length

438 amino acids

Sequence
(BLAST)

001: MLNYVERLYL KMVVRFNVLR FLGFPVMSGR TFILRLHSMS LSPLLSSRAL ALPPARSSPL LRLRPLLAAA SYPLRHSASG LGTRCFSTRP TTSSLNDPSP
101: NWSNRPPKET ILLDGCDFEH WLVVVEPPDP SLTRDEIIDS YIKTLAEVLG SEEEARMSIY SVSTKHYFAF GCKVSEEISY KIKPLPKVRW VLPDSYLDVK
201: NKDYGGEPFI DGKAVPYDPK YHEEWVRNNA RAQERSRRND RPRNFDRSRN FERRRENMQN FQNRPPPMAN QDSQNHNAQN AMPPNAQNPM PPRDAPPMPN
301: HDYNATPPTA GGGVQGYQGH QGGSPGGNMP GYVPNAGPSH QGGVQGYQGY QGGSPGGNMP GRVGYQGSDA GYHGGGSAYQ GGSPGHHGGN PPYQGGFSGY
401: QPGSSTYQGG NPNYQQGGSN YQGGAPAYRG RDVSGRDE

Best Arabidopsis Sequence Match ( AT3G15000.1 )
(BLAST)

001: MATHTISRSI LCRPAKSLSF LFTRSFASSA PLAKSPASSL LSRSRPLVAA FSSVFRGGLV SVKGLSTQAT SSSLNDPNPN WSNRPPKETI LLDGCDFEHW
101: LVVVEPPQGE PTRDEIIDSY IKTLAQIVGS EDEARMKIYS VSTRCYYAFG ALVSEDLSHK LKELSNVRWV LPDSYLDVRN KDYGGEPFID GKAVPYDPKY
201: HEEWIRNNAR ANERNRRNDR PRNNDRSRNF ERRRENMAGG PPPQRPPMGG PPPPPHIGGS APPPPHMGGS APPPPHMGQN YGPPPPNNMG GPRHPPPYGA
301: PPQNNMGGPR PPQNYGGTPP PNYGGAPPAN NMGGAPPPNY GGGPPPQYGA VPPPQYGGAP PQNNNYQQQG SGMQQPQYQN NYPPNRDGSG NPYQG

Arabidopsis Description

MORF8Multiple organellar RNA editing factor 8, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9LKA5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.