Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Os02t0708400-01 | Rice | plasma membrane | 76.97 | 71.45 |
EES05647 | Sorghum | cytosol | 76.67 | 70.97 |
Zm00001d051589_P001 | Maize | cytosol | 76.36 | 70.69 |
HORVU6Hr1G069310.1 | Barley | cytosol | 75.61 | 70.48 |
TraesCS6A01G274500.1 | Wheat | cytosol | 75.45 | 70.24 |
TraesCS6B01G302000.1 | Wheat | cytosol | 75.3 | 70.0 |
TraesCS6D01G254800.1 | Wheat | cytosol | 75.0 | 69.72 |
Zm00001d017793_P001 | Maize | cytosol | 75.0 | 69.42 |
GSMUA_Achr2P09630_001 | Banana | nucleus | 70.45 | 65.03 |
Solyc03g114320.2.1 | Tomato | cytosol | 69.39 | 62.74 |
PGSC0003DMT400062960 | Potato | cytosol | 69.39 | 62.74 |
VIT_17s0000g08260.t01 | Wine grape | cytosol | 69.55 | 62.2 |
VIT_14s0066g01280.t01 | Wine grape | cytosol | 62.58 | 61.64 |
KRH63534 | Soybean | nucleus | 65.45 | 59.5 |
KRG93305 | Soybean | cytosol | 62.73 | 59.14 |
KRH56614 | Soybean | cytosol | 62.27 | 58.55 |
KRH54405 | Soybean | cytosol | 64.7 | 56.71 |
GSMUA_Achr10P... | Banana | cytosol | 50.15 | 56.68 |
AT3G27960.1 | Thale cress | cytosol | 56.67 | 56.41 |
CDX86457 | Canola | cytosol | 56.06 | 55.72 |
Bra025315.1-P | Field mustard | cytosol | 56.06 | 55.72 |
CDY58518 | Canola | cytosol | 55.45 | 55.71 |
PGSC0003DMT400001405 | Potato | cytosol | 59.7 | 55.03 |
AT1G27500.2 | Thale cress | cytosol | 55.0 | 54.92 |
Solyc02g086840.2.1 | Tomato | cytosol | 58.79 | 54.57 |
CDY27619 | Canola | nucleus | 54.09 | 54.17 |
Bra032832.1-P | Field mustard | nucleus | 54.09 | 54.17 |
CDX90092 | Canola | cytosol, mitochondrion | 10.15 | 53.6 |
KRH57064 | Soybean | cytosol | 58.33 | 52.74 |
CDY56191 | Canola | cytosol | 55.3 | 51.26 |
KRH03299 | Soybean | cytosol | 28.48 | 47.12 |
GSMUA_Achr5P17290_001 | Banana | plastid | 18.33 | 24.2 |
GSMUA_Achr9P23570_001 | Banana | mitochondrion | 21.06 | 21.32 |
Protein Annotations
Gene3D:1.25.40.10 | MapMan:21.1.1.4.3 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
EnsemblPlantsGene:GSMUA_Achr10G20360_001 | EnsemblPlants:GSMUA_Achr10P20360_001 | EnsemblPlants:GSMUA_Achr10T20360_001 | InterPro:IPR011990 | InterPro:IPR013026 | InterPro:IPR019734 |
UniProt:M0RJW1 | PFAM:PF13181 | PFAM:PF13424 | PFscan:PS50005 | PFscan:PS50293 | PANTHER:PTHR19959 |
PANTHER:PTHR19959:SF156 | SMART:SM00028 | SUPFAM:SSF48452 | InterPro:TPR-contain_dom | InterPro:TPR-like_helical_dom_sf | InterPro:TPR_repeat |
UniParc:UPI0002961E9E | SEG:seg | : | : | : | : |
Description
tetratricopeptide repeat domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr10G20360_001]
Coordinates
chr10:+:26382773..26386221
Molecular Weight (calculated)
72101.2 Da
IEP (calculated)
4.813
GRAVY (calculated)
-0.351
Length
660 amino acids
Sequence
(BLAST)
(BLAST)
001: MPGIPRDGIV VNEASHELNS SNVKENLSTQ KSPDASPSRK TAPGEAANVP VETSNEPSIE QLYDNVCEME SSSDGSRSRH SFGSDGEESR IDSELRHLVG
101: AEMEAIRVIE EEEDGTNSRR PMQLQLETSI SGDAKSHNGT ADPSDTGLDN PDLGPFLLKH ARDLIASDNP RRALRYALRA ARAFEKCAGQ KPNLDLVMSL
201: HVIAAIYCKL GKFGEAVPVL QKSIEIPVLE EGQEHALAKF SGYMQLGDIH AMLGQLESSI QCYTTGLQIQ KQTLGDMDPR VGETCRYLAE AHIQALQFDE
301: AEKLCQMALD IHSEGGEAAS LEETADRRLM GLICDTKGNR EVALEHLVSA SVAMVANGQE TEVASVDCSI GDIYLSLGRY DEAVFAYQKA LVVFKTTKGA
401: NHTTIASVFV RLADLYNKIG KFKESKSYCE NALRIYGKPI PGTSSEEIAA GLTDVSAIYE SMNEHEQALK LLQKALKMYN SSSGQQSTIA GIEAQIGVLY
501: YILGNYGESY ASFKSAIAKF RACGEKKSAF FGIALNQMGL ACVQRYALNE ASELFEEAKS ILEQVCGPYH SETLGVYGNL AGTYDAMGRL DEAIEILEYI
601: VGLREEKLGT ANPDVDDEKR RLAELLKEAG RVRNRKARSL ETLLDTNPRV VKKDATLHEA
101: AEMEAIRVIE EEEDGTNSRR PMQLQLETSI SGDAKSHNGT ADPSDTGLDN PDLGPFLLKH ARDLIASDNP RRALRYALRA ARAFEKCAGQ KPNLDLVMSL
201: HVIAAIYCKL GKFGEAVPVL QKSIEIPVLE EGQEHALAKF SGYMQLGDIH AMLGQLESSI QCYTTGLQIQ KQTLGDMDPR VGETCRYLAE AHIQALQFDE
301: AEKLCQMALD IHSEGGEAAS LEETADRRLM GLICDTKGNR EVALEHLVSA SVAMVANGQE TEVASVDCSI GDIYLSLGRY DEAVFAYQKA LVVFKTTKGA
401: NHTTIASVFV RLADLYNKIG KFKESKSYCE NALRIYGKPI PGTSSEEIAA GLTDVSAIYE SMNEHEQALK LLQKALKMYN SSSGQQSTIA GIEAQIGVLY
501: YILGNYGESY ASFKSAIAKF RACGEKKSAF FGIALNQMGL ACVQRYALNE ASELFEEAKS ILEQVCGPYH SETLGVYGNL AGTYDAMGRL DEAIEILEYI
601: VGLREEKLGT ANPDVDDEKR RLAELLKEAG RVRNRKARSL ETLLDTNPRV VKKDATLHEA
001: MDVGESNERV KDDSALQASP RSPLSSIDLA IDGAMNASIE QLYHNVCEME SSDDQSPSRA SFISYGAESR IDLELRHLVG DVGEEGESKK EIILEKKEES
101: NGEGSLSQKK PLSNGKKVAK TSPNNPKMPG SRISSRKSPD LGKVSVDEES PELGVVLLKQ ARELVSSGEN LNKALDLALR AVKVFEKCGE GEKQLGLNLV
201: MSLHILAAIY AGLGRYNDAV PVLERSIEIP MIEDGEDHAL AKFAGCMQLG DMYGLMGQVE NSIMLYTAGL EIQRQVLGES DARVGETCRY LAEAHVQAMQ
301: FEEASRLCQM ALDIHKENGA AATASIEEAA DRKLMGLICD AKGDYEVALE HYVLASMAMS SQNHREDVAA VDCSIGDAYM SLARFDEAIF AYQKALAVFK
401: QGKGETHSSV ALVYVRLADL YNKIGKTRDS KSYCENALKI YLKPTPGTPM EEVATGFIEI SAIYQSMNEL DQALKLLRRA LKIYANAPGQ QNTIAGIEAQ
501: MGVVTYMMGN YSESYDIFKS AISKFRNSGE KKTALFGIAL NQMGLACVQR YAINEAADLF EEAKTILEKE CGPYHPDTLA VYSNLAGTYD AMGRLDDAIE
601: ILEYVVGTRE EKLGTANPEV EDEKQRLAAL LKEAGRGRSK RNRALLTLLD NNPEIANGQR PVY
101: NGEGSLSQKK PLSNGKKVAK TSPNNPKMPG SRISSRKSPD LGKVSVDEES PELGVVLLKQ ARELVSSGEN LNKALDLALR AVKVFEKCGE GEKQLGLNLV
201: MSLHILAAIY AGLGRYNDAV PVLERSIEIP MIEDGEDHAL AKFAGCMQLG DMYGLMGQVE NSIMLYTAGL EIQRQVLGES DARVGETCRY LAEAHVQAMQ
301: FEEASRLCQM ALDIHKENGA AATASIEEAA DRKLMGLICD AKGDYEVALE HYVLASMAMS SQNHREDVAA VDCSIGDAYM SLARFDEAIF AYQKALAVFK
401: QGKGETHSSV ALVYVRLADL YNKIGKTRDS KSYCENALKI YLKPTPGTPM EEVATGFIEI SAIYQSMNEL DQALKLLRRA LKIYANAPGQ QNTIAGIEAQ
501: MGVVTYMMGN YSESYDIFKS AISKFRNSGE KKTALFGIAL NQMGLACVQR YAINEAADLF EEAKTILEKE CGPYHPDTLA VYSNLAGTYD AMGRLDDAIE
601: ILEYVVGTRE EKLGTANPEV EDEKQRLAAL LKEAGRGRSK RNRALLTLLD NNPEIANGQR PVY
Arabidopsis Description
KLCR2Protein KINESIN LIGHT CHAIN-RELATED 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LII8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.