Skip to main content
crop-pal logo
Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
PPI

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G27960.1 GSMUA_Achr3P31150_001 AT1G29810.1 21798944
AT3G27960.1 GSMUA_Achr10P... AT1G49840.1 21798944
AT3G27960.1 GSMUA_Achr10P... AT1G49840.1 21798944
AT3G27960.1 GSMUA_Achr2P13470_001 AT1G49840.1 21798944
AT3G27960.1 GSMUA_Achr2P21540_001 AT1G49840.1 21798944
AT3G27960.1 GSMUA_Achr3P02230_001 AT1G49840.1 21798944
AT3G27960.1 GSMUA_Achr4P14230_001 AT1G49840.1 21798944
AT3G27960.1 GSMUA_Achr4P32590_001 AT1G49840.1 21798944
AT3G27960.1 GSMUA_Achr6P16820_001 AT1G49840.1 21798944
AT3G27960.1 GSMUA_Achr6P24020_001 AT1G49840.1 21798944
AT3G27960.1 GSMUA_Achr7P00620_001 AT1G49840.1 21798944
AT3G27960.1 GSMUA_Achr7P26350_001 AT1G49840.1 21798944
AT3G27960.1 GSMUA_Achr6P29360_001 AT1G50900.1 21798944
AT3G27960.1 GSMUA_Achr9P11670_001 AT1G50900.1 21798944
AT3G27960.1 GSMUA_Achr9P30190_001 AT1G50900.1 21798944
AT3G27960.1 GSMUA_Achr5P02030_001 AT1G54770.1 21798944
AT3G27960.1 GSMUA_Achr8P07930_001 AT2G18465.1 21798944
AT3G27960.1 GSMUA_Achr8P17360_001 AT2G18465.1 21798944
AT3G27960.1 GSMUA_Achr10P... AT2G18730.1 21798944
AT3G27960.1 GSMUA_Achr10P... AT2G18730.1 21798944
AT3G27960.1 GSMUA_Achr1P23370_001 AT2G18730.1 21798944
AT3G27960.1 GSMUA_Achr1P23380_001 AT2G18730.1 21798944
AT3G27960.1 GSMUA_Achr6P03930_001 AT2G18730.1 21798944
AT3G27960.1 GSMUA_Achr6P03940_001 AT2G18730.1 21798944
AT3G27960.1 GSMUA_Achr7P16340_001 AT2G18730.1 21798944
AT3G27960.1 GSMUA_Achr10P... AT2G27990.1 21798944
AT3G27960.1 GSMUA_Achr11P... AT2G27990.1 21798944
AT3G27960.1 GSMUA_Achr3P05610_001 AT2G28880.1 21798944
AT3G27960.1 GSMUA_Achr1P03600_001 AT2G46870.1 21798944
AT3G27960.1 GSMUA_Achr2P00400_001 AT2G46870.1 21798944
AT3G27960.1 GSMUA_Achr2P10230_001 AT2G46870.1 21798944
AT3G27960.1 GSMUA_Achr4P12210_001 AT2G46870.1 21798944
AT3G27960.1 GSMUA_Achr4P24970_001 AT2G46870.1 21798944
AT3G27960.1 GSMUA_Achr4P26430_001 AT2G46870.1 21798944
AT3G27960.1 GSMUA_Achr4P30170_001 AT2G46870.1 21798944
AT3G27960.1 GSMUA_Achr5P10220_001 AT2G46870.1 21798944
AT3G27960.1 GSMUA_Achr5P12850_001 AT2G46870.1 21798944
AT3G27960.1 GSMUA_Achr5P20340_001 AT2G46870.1 21798944
AT3G27960.1 GSMUA_Achr7P04630_001 AT2G46870.1 21798944
AT3G27960.1 GSMUA_Achr9P18780_001 AT2G46870.1 21798944
AT3G27960.1 GSMUA_AchrUn_... AT2G46870.1 21798944
AT3G27960.1 GSMUA_Achr1P24640_001 AT3G01180.1 21798944
AT3G27960.1 GSMUA_Achr11P... AT3G05210.1 21798944
AT3G27960.1 GSMUA_Achr11P... AT3G07480.1 21798944
AT3G27960.1 GSMUA_Achr5P25690_001 AT3G07480.1 21798944
AT3G27960.1 GSMUA_Achr6P08260_001 AT3G11590.1 21798944
AT3G27960.1 GSMUA_Achr6P16290_001 AT3G11590.1 21798944
AT3G27960.1 GSMUA_Achr10P... AT3G13160.1 21798944
AT3G27960.1 GSMUA_AchrUn_... AT3G56290.1 21798944
AT3G27960.1 GSMUA_Achr10P... AT3G60200.1 21798944
AT3G27960.1 GSMUA_Achr2P04810_001 AT3G60200.1 21798944
AT3G27960.1 GSMUA_Achr3P27500_001 AT3G60200.1 21798944
AT3G27960.1 GSMUA_AchrUn_... AT3G60200.1 21798944
AT3G27960.1 GSMUA_Achr1P13480_001 AT4G32470.1 21798944
AT3G27960.1 GSMUA_Achr9P07800_001 AT4G32470.1 21798944
AT3G27960.1 GSMUA_Achr1P09980_001 AT5G11090.1 21798944
AT3G27960.1 GSMUA_Achr4P04510_001 AT5G16560.1 21798944
AT3G27960.1 GSMUA_Achr6P08260_001 AT5G22310.1 21798944
AT3G27960.1 GSMUA_Achr6P16290_001 AT5G22310.1 21798944
AT3G27960.1 GSMUA_Achr10P... AT5G65220.1 21798944
AT3G27960.1 GSMUA_Achr7P12650_001 AT5G65220.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os02t0708400-01 Rice plasma membrane 76.97 71.45
EES05647 Sorghum cytosol 76.67 70.97
Zm00001d051589_P001 Maize cytosol 76.36 70.69
HORVU6Hr1G069310.1 Barley cytosol 75.61 70.48
TraesCS6A01G274500.1 Wheat cytosol 75.45 70.24
TraesCS6B01G302000.1 Wheat cytosol 75.3 70.0
TraesCS6D01G254800.1 Wheat cytosol 75.0 69.72
Zm00001d017793_P001 Maize cytosol 75.0 69.42
GSMUA_Achr2P09630_001 Banana nucleus 70.45 65.03
Solyc03g114320.2.1 Tomato cytosol 69.39 62.74
PGSC0003DMT400062960 Potato cytosol 69.39 62.74
VIT_17s0000g08260.t01 Wine grape cytosol 69.55 62.2
VIT_14s0066g01280.t01 Wine grape cytosol 62.58 61.64
KRH63534 Soybean nucleus 65.45 59.5
KRG93305 Soybean cytosol 62.73 59.14
KRH56614 Soybean cytosol 62.27 58.55
KRH54405 Soybean cytosol 64.7 56.71
GSMUA_Achr10P... Banana cytosol 50.15 56.68
AT3G27960.1 Thale cress cytosol 56.67 56.41
CDX86457 Canola cytosol 56.06 55.72
Bra025315.1-P Field mustard cytosol 56.06 55.72
CDY58518 Canola cytosol 55.45 55.71
PGSC0003DMT400001405 Potato cytosol 59.7 55.03
AT1G27500.2 Thale cress cytosol 55.0 54.92
Solyc02g086840.2.1 Tomato cytosol 58.79 54.57
CDY27619 Canola nucleus 54.09 54.17
Bra032832.1-P Field mustard nucleus 54.09 54.17
CDX90092 Canola cytosol, mitochondrion 10.15 53.6
KRH57064 Soybean cytosol 58.33 52.74
CDY56191 Canola cytosol 55.3 51.26
KRH03299 Soybean cytosol 28.48 47.12
GSMUA_Achr5P17290_001 Banana plastid 18.33 24.2
GSMUA_Achr9P23570_001 Banana mitochondrion 21.06 21.32
Protein Annotations
Gene3D:1.25.40.10MapMan:21.1.1.4.3ncoils:CoilGO:GO:0003674GO:GO:0005488GO:GO:0005515
EnsemblPlantsGene:GSMUA_Achr10G20360_001EnsemblPlants:GSMUA_Achr10P20360_001EnsemblPlants:GSMUA_Achr10T20360_001InterPro:IPR011990InterPro:IPR013026InterPro:IPR019734
UniProt:M0RJW1PFAM:PF13181PFAM:PF13424PFscan:PS50005PFscan:PS50293PANTHER:PTHR19959
PANTHER:PTHR19959:SF156SMART:SM00028SUPFAM:SSF48452InterPro:TPR-contain_domInterPro:TPR-like_helical_dom_sfInterPro:TPR_repeat
UniParc:UPI0002961E9ESEG:seg::::
Description
tetratricopeptide repeat domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr10G20360_001]
Coordinates
chr10:+:26382773..26386221
Molecular Weight (calculated)
72101.2 Da
IEP (calculated)
4.813
GRAVY (calculated)
-0.351
Length
660 amino acids
Sequence
(BLAST)
001: MPGIPRDGIV VNEASHELNS SNVKENLSTQ KSPDASPSRK TAPGEAANVP VETSNEPSIE QLYDNVCEME SSSDGSRSRH SFGSDGEESR IDSELRHLVG
101: AEMEAIRVIE EEEDGTNSRR PMQLQLETSI SGDAKSHNGT ADPSDTGLDN PDLGPFLLKH ARDLIASDNP RRALRYALRA ARAFEKCAGQ KPNLDLVMSL
201: HVIAAIYCKL GKFGEAVPVL QKSIEIPVLE EGQEHALAKF SGYMQLGDIH AMLGQLESSI QCYTTGLQIQ KQTLGDMDPR VGETCRYLAE AHIQALQFDE
301: AEKLCQMALD IHSEGGEAAS LEETADRRLM GLICDTKGNR EVALEHLVSA SVAMVANGQE TEVASVDCSI GDIYLSLGRY DEAVFAYQKA LVVFKTTKGA
401: NHTTIASVFV RLADLYNKIG KFKESKSYCE NALRIYGKPI PGTSSEEIAA GLTDVSAIYE SMNEHEQALK LLQKALKMYN SSSGQQSTIA GIEAQIGVLY
501: YILGNYGESY ASFKSAIAKF RACGEKKSAF FGIALNQMGL ACVQRYALNE ASELFEEAKS ILEQVCGPYH SETLGVYGNL AGTYDAMGRL DEAIEILEYI
601: VGLREEKLGT ANPDVDDEKR RLAELLKEAG RVRNRKARSL ETLLDTNPRV VKKDATLHEA
Best Arabidopsis Sequence Match ( AT3G27960.3 )
(BLAST)
001: MDVGESNERV KDDSALQASP RSPLSSIDLA IDGAMNASIE QLYHNVCEME SSDDQSPSRA SFISYGAESR IDLELRHLVG DVGEEGESKK EIILEKKEES
101: NGEGSLSQKK PLSNGKKVAK TSPNNPKMPG SRISSRKSPD LGKVSVDEES PELGVVLLKQ ARELVSSGEN LNKALDLALR AVKVFEKCGE GEKQLGLNLV
201: MSLHILAAIY AGLGRYNDAV PVLERSIEIP MIEDGEDHAL AKFAGCMQLG DMYGLMGQVE NSIMLYTAGL EIQRQVLGES DARVGETCRY LAEAHVQAMQ
301: FEEASRLCQM ALDIHKENGA AATASIEEAA DRKLMGLICD AKGDYEVALE HYVLASMAMS SQNHREDVAA VDCSIGDAYM SLARFDEAIF AYQKALAVFK
401: QGKGETHSSV ALVYVRLADL YNKIGKTRDS KSYCENALKI YLKPTPGTPM EEVATGFIEI SAIYQSMNEL DQALKLLRRA LKIYANAPGQ QNTIAGIEAQ
501: MGVVTYMMGN YSESYDIFKS AISKFRNSGE KKTALFGIAL NQMGLACVQR YAINEAADLF EEAKTILEKE CGPYHPDTLA VYSNLAGTYD AMGRLDDAIE
601: ILEYVVGTRE EKLGTANPEV EDEKQRLAAL LKEAGRGRSK RNRALLTLLD NNPEIANGQR PVY
Arabidopsis Description
KLCR2Protein KINESIN LIGHT CHAIN-RELATED 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LII8]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.