Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr5P12850_001 | Banana | nucleus | 44.41 | 63.98 |
| GSMUA_Achr4P30170_001 | Banana | nucleus | 44.08 | 53.82 |
| GSMUA_Achr4P26430_001 | Banana | nucleus | 43.42 | 52.8 |
| GSMUA_Achr9P18780_001 | Banana | nucleus | 49.34 | 52.45 |
| GSMUA_Achr5P10220_001 | Banana | nucleus | 46.71 | 52.21 |
| GSMUA_Achr2P00400_001 | Banana | nucleus | 49.01 | 51.74 |
| GSMUA_Achr4P24970_001 | Banana | nucleus | 38.49 | 49.79 |
| GSMUA_Achr1P03600_001 | Banana | nucleus | 43.75 | 40.3 |
| CDY67348 | Canola | nucleus | 19.74 | 40.0 |
| GSMUA_Achr9P08980_001 | Banana | nucleus | 20.72 | 38.89 |
| EER92015 | Sorghum | nucleus | 34.87 | 38.69 |
| Zm00001d047359_P001 | Maize | nucleus | 35.2 | 38.63 |
| Zm00001d029749_P001 | Maize | nucleus | 34.54 | 38.46 |
| Zm00001d035982_P001 | Maize | nucleus | 10.86 | 37.5 |
| GSMUA_Achr7P04630_001 | Banana | nucleus | 25.0 | 36.89 |
| GSMUA_Achr4P12210_001 | Banana | nucleus | 26.97 | 36.61 |
| TraesCS1B01G215000.1 | Wheat | nucleus | 32.89 | 36.36 |
| Zm00001d048815_P001 | Maize | nucleus | 27.63 | 36.21 |
| TraesCS1A01G200500.1 | Wheat | nucleus | 32.89 | 35.97 |
| Os03t0120900-01 | Rice | nucleus | 36.51 | 35.69 |
| Os10t0537100-00 | Rice | nucleus | 36.18 | 35.26 |
| HORVU1Hr1G051780.2 | Barley | nucleus | 33.88 | 35.15 |
| TraesCS5A01G516600.1 | Wheat | nucleus | 36.51 | 35.02 |
| CDY43060 | Canola | cytosol | 18.75 | 34.97 |
| Bra040478.1-P | Field mustard | nucleus | 33.55 | 34.81 |
| TraesCS4B01G348500.1 | Wheat | nucleus | 36.51 | 34.8 |
| TraesCS1D01G203900.1 | Wheat | nucleus | 33.22 | 34.71 |
| GSMUA_Achr11P... | Banana | nucleus | 21.05 | 34.59 |
| Zm00001d010077_P001 | Maize | nucleus | 29.28 | 34.36 |
| Bra004501.1-P | Field mustard | nucleus | 33.22 | 34.01 |
| CDX80053 | Canola | nucleus | 33.22 | 34.01 |
| CDY48008 | Canola | nucleus | 33.88 | 33.88 |
| GSMUA_Achr3P19210_001 | Banana | nucleus | 22.37 | 33.83 |
| CDY27515 | Canola | nucleus | 33.55 | 33.55 |
| TraesCS2A01G394700.1 | Wheat | nucleus | 44.41 | 33.42 |
| CDY41564 | Canola | nucleus | 32.57 | 33.33 |
| GSMUA_AchrUn_... | Banana | cytosol | 26.32 | 33.2 |
| GSMUA_Achr9P02600_001 | Banana | nucleus | 21.05 | 33.16 |
| OQU93364 | Sorghum | nucleus | 35.86 | 33.03 |
| TraesCS2B01G412700.1 | Wheat | nucleus | 44.41 | 33.01 |
| CDX83351 | Canola | nucleus | 33.22 | 32.79 |
| CDY50908 | Canola | nucleus | 33.88 | 32.7 |
| Solyc08g013700.1.1 | Tomato | nucleus | 31.58 | 32.65 |
| AT2G46870.1 | Thale cress | nucleus | 33.22 | 32.58 |
| Bra000434.1-P | Field mustard | nucleus | 33.22 | 32.58 |
| TraesCS2D01G392400.1 | Wheat | nucleus | 43.75 | 32.52 |
| PGSC0003DMT400015010 | Potato | nucleus | 31.91 | 32.33 |
| HORVU4Hr1G084950.3 | Barley | nucleus | 36.18 | 32.26 |
| HORVU7Hr1G046950.1 | Barley | nucleus | 28.95 | 32.12 |
| Zm00001d002562_P001 | Maize | nucleus | 43.09 | 32.03 |
| TraesCS6B01G286900.1 | Wheat | nucleus | 42.76 | 31.78 |
| Os02t0683500-01 | Rice | nucleus | 42.76 | 31.55 |
| Zm00001d027409_P001 | Maize | nucleus | 33.88 | 31.5 |
| EES12712 | Sorghum | nucleus | 43.42 | 31.43 |
| TraesCS6A01G259600.1 | Wheat | nucleus | 42.76 | 31.4 |
| TraesCS6D01G240600.1 | Wheat | nucleus | 42.76 | 31.4 |
| Os04t0581400-01 | Rice | nucleus | 30.26 | 31.4 |
| PGSC0003DMT400015011 | Potato | nucleus | 32.24 | 31.31 |
| Solyc08g013690.1.1 | Tomato | nucleus | 32.89 | 30.86 |
| HORVU6Hr1G066190.2 | Barley | nucleus | 41.45 | 30.81 |
| Zm00001d026005_P001 | Maize | nucleus | 40.46 | 30.45 |
| GSMUA_Achr6P13140_001 | Banana | nucleus | 24.67 | 30.36 |
| CDX67872 | Canola | nucleus | 28.29 | 30.18 |
| Bra003482.1-P | Field mustard | nucleus | 28.29 | 30.07 |
| Zm00001d051471_P001 | Maize | nucleus | 41.45 | 30.0 |
| CDX90001 | Canola | nucleus | 33.22 | 29.36 |
| Solyc08g083400.2.1 | Tomato | nucleus | 32.24 | 29.34 |
| CDY15208 | Canola | nucleus | 30.92 | 29.19 |
| Zm00001d017618_P001 | Maize | nucleus | 40.46 | 29.15 |
| CDY69432 | Canola | nucleus | 26.64 | 29.14 |
| CDY58763 | Canola | nucleus | 30.26 | 28.93 |
| GSMUA_Achr6P35600_001 | Banana | nucleus | 23.03 | 28.93 |
| Bra030497.1-P | Field mustard | nucleus | 33.55 | 28.81 |
| Bra033294.1-P | Field mustard | nucleus | 32.57 | 28.78 |
| Bra007646.1-P | Field mustard | nucleus | 27.63 | 28.77 |
| CDX76605 | Canola | nucleus | 27.63 | 28.77 |
| CDY11388 | Canola | nucleus | 27.63 | 28.77 |
| AT3G61970.1 | Thale cress | nucleus | 28.29 | 28.76 |
| Bra014415.1-P | Field mustard | nucleus | 30.26 | 28.75 |
| CDY58764 | Canola | nucleus | 30.26 | 28.75 |
| AT1G01030.1 | Thale cress | nucleus | 33.22 | 28.21 |
| EES07445 | Sorghum | nucleus | 40.13 | 28.11 |
| PGSC0003DMT400031863 | Potato | nucleus | 37.5 | 28.08 |
| GSMUA_Achr5P20340_001 | Banana | nucleus | 30.92 | 27.89 |
| KRH68988 | Soybean | nucleus | 36.18 | 26.19 |
| KRG97268 | Soybean | nucleus | 35.53 | 26.15 |
| VIT_02s0025g03000.t01 | Wine grape | nucleus | 37.83 | 25.22 |
| GSMUA_Achr1P21250_001 | Banana | nucleus | 24.34 | 25.17 |
| VIT_15s0048g02370.t01 | Wine grape | nucleus | 37.5 | 24.73 |
| GSMUA_Achr6P01420_001 | Banana | nucleus | 25.66 | 24.68 |
| GSMUA_Achr1P05400_001 | Banana | nucleus | 24.01 | 24.5 |
| GSMUA_Achr5P09950_001 | Banana | nucleus | 25.33 | 23.91 |
| GSMUA_Achr6P18320_001 | Banana | nucleus | 26.64 | 23.82 |
| KRH47753 | Soybean | nucleus | 38.16 | 23.2 |
| GSMUA_Achr6P09880_001 | Banana | nucleus | 21.71 | 22.84 |
| CDY07140 | Canola | nucleus | 22.37 | 22.22 |
| Bra037417.1-P | Field mustard | nucleus | 22.04 | 21.61 |
| CDY49614 | Canola | nucleus | 22.04 | 21.61 |
| AT4G01500.1 | Thale cress | nucleus | 23.36 | 21.32 |
| Bra008552.1-P | Field mustard | nucleus | 23.68 | 21.3 |
| GSMUA_Achr3P29380_001 | Banana | nucleus | 18.42 | 21.29 |
| CDX97251 | Canola | nucleus | 23.68 | 21.24 |
| GSMUA_Achr2P22560_001 | Banana | nucleus | 21.38 | 20.97 |
| KRH06334 | Soybean | nucleus | 39.8 | 20.79 |
| GSMUA_AchrUn_... | Banana | nucleus | 25.33 | 20.59 |
| GSMUA_Achr4P06710_001 | Banana | nucleus | 22.37 | 19.43 |
| GSMUA_Achr3P21100_001 | Banana | nucleus | 23.36 | 17.23 |
| GSMUA_Achr9P21470_001 | Banana | nucleus | 15.79 | 15.48 |
| GSMUA_Achr11P... | Banana | nucleus | 17.11 | 15.48 |
| GSMUA_Achr10P... | Banana | nucleus | 14.14 | 14.73 |
| GSMUA_Achr8P14650_001 | Banana | nucleus | 19.74 | 14.49 |
| GSMUA_Achr4P03670_001 | Banana | nucleus | 13.49 | 13.95 |
Protein Annotations
| Gene3D:2.40.330.10 | MapMan:35.1 | InterPro:B3_DNA-bd | InterPro:DNA-bd_pseudobarrel_sf | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr2G10230_001 | EnsemblPlants:GSMUA_Achr2P10230_001 | EnsemblPlants:GSMUA_Achr2T10230_001 | InterPro:IPR003340 | InterPro:IPR015300 |
| UniProt:M0S6R4 | PFAM:PF02362 | PANTHER:PTHR31140 | PANTHER:PTHR31140:SF4 | SMART:SM01019 | SUPFAM:SSF101936 |
| UniParc:UPI0002968F20 | : | : | : | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr2G10230_001]
Coordinates
chr2:+:13403719..13404720
Molecular Weight (calculated)
33264.3 Da
IEP (calculated)
9.515
GRAVY (calculated)
-0.560
Length
304 amino acids
Sequence
(BLAST)
(BLAST)
001: MEFTHGIRDR LSTTDRREEQ VEVSTHLPFI PSYPLPSSSS TAFRWHDDSS GAGDCASTEK EHMFYKVVTP SDVGKLNRLV IPKQHAEKYF PLDTQSYVMT
101: KGWSRFVKEK GLQAGDTISF GRGVGDAGRH RLFIDWKRRP ENRDPPRIPL PELSFARSAG PWSGRLFVPP EAGCGHTWQG HTYPAAGLGT GGGQCLYYSL
201: PAARPPQMEV QHAGRSGFPM VLGSPLPLVR NQPAVKRVRL FGVTLDCPES GGSVNYNGHS HSVRVPQLHP GAALPLLQSP GTAGESTPSG SSSVYKKQHS
301: QPDL
101: KGWSRFVKEK GLQAGDTISF GRGVGDAGRH RLFIDWKRRP ENRDPPRIPL PELSFARSAG PWSGRLFVPP EAGCGHTWQG HTYPAAGLGT GGGQCLYYSL
201: PAARPPQMEV QHAGRSGFPM VLGSPLPLVR NQPAVKRVRL FGVTLDCPES GGSVNYNGHS HSVRVPQLHP GAALPLLQSP GTAGESTPSG SSSVYKKQHS
301: QPDL
001: MDLSLAPTTT TSSDQEQDRD QELTSNIGAS SSSGPSGNNN NLPMMMIPPP EKEHMFDKVV TPSDVGKLNR LVIPKQHAER YFPLDSSNNQ NGTLLNFQDR
101: NGKMWRFRYS YWNSSQSYVM TKGWSRFVKE KKLDAGDIVS FQRGIGDESE RSKLYIDWRH RPDMSLVQAH QFEYNSVPIH RGLNIGNHQR SYYNTQRQEF
201: VGYGYGNLAG RCYYTGSPLD HRNIVGSEPL VIDSVPVVPG RLTPVMLPPL PPPPSTAGKR LRLFGVNMEC GNDYNQQEES WLVPRGEIGA SSSSSSALRL
301: NLSTDHDDDN DDGDDGDDDQ FAKKGKSSLS LNFNP
101: NGKMWRFRYS YWNSSQSYVM TKGWSRFVKE KKLDAGDIVS FQRGIGDESE RSKLYIDWRH RPDMSLVQAH QFEYNSVPIH RGLNIGNHQR SYYNTQRQEF
201: VGYGYGNLAG RCYYTGSPLD HRNIVGSEPL VIDSVPVVPG RLTPVMLPPL PPPPSTAGKR LRLFGVNMEC GNDYNQQEES WLVPRGEIGA SSSSSSALRL
301: NLSTDHDDDN DDGDDGDDDQ FAKKGKSSLS LNFNP
Arabidopsis Description
NGA3NGA3 [Source:UniProtKB/TrEMBL;Acc:A0A178W3T3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.