Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra033294.1-P | Field mustard | nucleus | 99.13 | 99.13 |
| CDY15208 | Canola | nucleus | 87.5 | 93.48 |
| AT1G01030.1 | Thale cress | nucleus | 91.57 | 87.99 |
| Zm00001d035982_P001 | Maize | nucleus | 15.12 | 59.09 |
| CDY67348 | Canola | nucleus | 21.22 | 48.67 |
| CDX80053 | Canola | nucleus | 40.7 | 47.14 |
| CDY27515 | Canola | nucleus | 41.57 | 47.04 |
| CDY41564 | Canola | nucleus | 40.41 | 46.8 |
| CDY48008 | Canola | nucleus | 41.28 | 46.71 |
| GSMUA_Achr4P26430_001 | Banana | nucleus | 33.43 | 46.0 |
| CDX83351 | Canola | nucleus | 40.7 | 45.45 |
| CDY50908 | Canola | nucleus | 41.28 | 45.08 |
| GSMUA_Achr4P30170_001 | Banana | nucleus | 32.56 | 44.98 |
| CDY69432 | Canola | nucleus | 36.05 | 44.6 |
| CDX67872 | Canola | nucleus | 36.63 | 44.21 |
| CDX76605 | Canola | nucleus | 37.5 | 44.18 |
| CDY11388 | Canola | nucleus | 37.5 | 44.18 |
| Zm00001d048815_P001 | Maize | nucleus | 29.07 | 43.1 |
| CDY43060 | Canola | cytosol | 20.35 | 42.94 |
| Zm00001d010077_P001 | Maize | nucleus | 32.27 | 42.86 |
| TraesCS5A01G516600.1 | Wheat | nucleus | 38.95 | 42.27 |
| CDY58763 | Canola | nucleus | 38.95 | 42.14 |
| Os03t0120900-01 | Rice | nucleus | 38.08 | 42.12 |
| Zm00001d029749_P001 | Maize | nucleus | 33.14 | 41.76 |
| TraesCS4B01G348500.1 | Wheat | nucleus | 38.66 | 41.69 |
| EER92015 | Sorghum | nucleus | 33.14 | 41.61 |
| CDY58764 | Canola | nucleus | 38.66 | 41.56 |
| Zm00001d047359_P001 | Maize | nucleus | 33.43 | 41.52 |
| TraesCS1A01G200500.1 | Wheat | nucleus | 33.43 | 41.37 |
| GSMUA_Achr7P04630_001 | Banana | nucleus | 24.71 | 41.26 |
| TraesCS1B01G215000.1 | Wheat | nucleus | 32.85 | 41.09 |
| GSMUA_Achr5P12850_001 | Banana | nucleus | 25.0 | 40.76 |
| TraesCS7A01G020800.1 | Wheat | nucleus | 23.26 | 40.4 |
| Zm00001d027409_P001 | Maize | nucleus | 38.37 | 40.37 |
| TraesCS7A01G461000.1 | Wheat | nucleus | 22.67 | 40.0 |
| Os10t0537100-00 | Rice | nucleus | 35.76 | 39.42 |
| OQU93364 | Sorghum | nucleus | 37.79 | 39.39 |
| TraesCS7D01G448900.1 | Wheat | nucleus | 22.38 | 39.29 |
| Os06t0107800-02 | Rice | nucleus | 22.67 | 39.2 |
| KXG19112 | Sorghum | nucleus | 23.26 | 39.02 |
| HORVU0Hr1G022200.1 | Barley | nucleus | 22.67 | 39.0 |
| TraesCS1D01G203900.1 | Wheat | nucleus | 32.85 | 38.83 |
| TraesCS7B01G362500.1 | Wheat | nucleus | 22.09 | 38.78 |
| HORVU4Hr1G084950.3 | Barley | nucleus | 38.37 | 38.71 |
| HORVU1Hr1G051780.2 | Barley | nucleus | 32.85 | 38.57 |
| TraesCS4A01G472700.1 | Wheat | nucleus | 24.13 | 38.25 |
| GSMUA_Achr1P03600_001 | Banana | nucleus | 36.34 | 37.88 |
| GSMUA_Achr4P24970_001 | Banana | nucleus | 25.87 | 37.87 |
| TraesCS7A01G020700.1 | Wheat | nucleus | 23.55 | 37.67 |
| GSMUA_Achr4P12210_001 | Banana | nucleus | 24.42 | 37.5 |
| Zm00001d024103_P001 | Maize | nucleus | 24.42 | 37.5 |
| Zm00001d035903_P001 | Maize | nucleus | 24.42 | 37.5 |
| CDY43751 | Canola | nucleus | 26.45 | 37.45 |
| TraesCS7D01G017000.1 | Wheat | nucleus | 23.55 | 37.33 |
| HORVU7Hr1G046950.1 | Barley | nucleus | 29.65 | 37.23 |
| CDX84162 | Canola | nucleus | 26.16 | 37.04 |
| GSMUA_AchrUn_... | Banana | cytosol | 25.87 | 36.93 |
| CDX73868 | Canola | nucleus | 25.29 | 36.86 |
| HORVU7Hr1G002230.1 | Barley | nucleus | 23.55 | 36.82 |
| CDX75073 | Canola | nucleus | 26.45 | 36.69 |
| GSMUA_Achr5P10220_001 | Banana | nucleus | 28.78 | 36.4 |
| GSMUA_Achr9P18780_001 | Banana | nucleus | 29.36 | 35.31 |
| Os04t0581400-01 | Rice | nucleus | 29.94 | 35.15 |
| KXG19111 | Sorghum | nucleus | 24.13 | 34.87 |
| GSMUA_Achr2P00400_001 | Banana | nucleus | 29.07 | 34.72 |
| CDY08512 | Canola | nucleus | 25.0 | 34.68 |
| EES13386 | Sorghum | nucleus | 25.0 | 33.99 |
| CDY62470 | Canola | nucleus | 22.38 | 33.77 |
| Zm00001d024545_P001 | Maize | nucleus | 24.42 | 33.73 |
| CDY47260 | Canola | nucleus | 25.87 | 33.33 |
| GSMUA_Achr2P10230_001 | Banana | nucleus | 29.36 | 33.22 |
| CDY01036 | Canola | nucleus | 24.71 | 33.07 |
| Os02t0683500-01 | Rice | nucleus | 39.24 | 32.77 |
| TraesCS2A01G394700.1 | Wheat | nucleus | 38.37 | 32.67 |
| TraesCS2B01G412700.1 | Wheat | nucleus | 38.66 | 32.52 |
| TraesCS2D01G392400.1 | Wheat | nucleus | 38.66 | 32.52 |
| TraesCS6B01G286900.1 | Wheat | nucleus | 38.08 | 32.03 |
| TraesCS6A01G259600.1 | Wheat | nucleus | 38.37 | 31.88 |
| HORVU6Hr1G066190.2 | Barley | nucleus | 37.5 | 31.54 |
| EES12712 | Sorghum | nucleus | 38.37 | 31.43 |
| TraesCS6D01G240600.1 | Wheat | nucleus | 37.79 | 31.4 |
| Zm00001d026005_P001 | Maize | nucleus | 36.63 | 31.19 |
| Zm00001d002562_P001 | Maize | nucleus | 36.92 | 31.05 |
| CDX97251 | Canola | nucleus | 30.52 | 30.97 |
| CDY49614 | Canola | nucleus | 27.91 | 30.97 |
| Os08t0157700-00 | Rice | nucleus | 25.58 | 30.66 |
| Zm00001d051471_P001 | Maize | nucleus | 37.21 | 30.48 |
| CDY07140 | Canola | nucleus | 27.03 | 30.39 |
| Zm00001d017618_P001 | Maize | nucleus | 37.21 | 30.33 |
| GSMUA_Achr5P20340_001 | Banana | nucleus | 29.65 | 30.27 |
| EES07445 | Sorghum | nucleus | 37.79 | 29.95 |
| CDY72302 | Canola | nucleus | 26.74 | 28.22 |
| CDX80996 | Canola | nucleus | 22.38 | 28.0 |
| CDX97996 | Canola | nucleus | 26.45 | 28.0 |
| CDY58354 | Canola | nucleus | 26.45 | 27.91 |
| CDY61361 | Canola | nucleus | 26.45 | 27.83 |
| CDX81561 | Canola | nucleus | 27.03 | 27.11 |
| CDY40973 | Canola | nucleus | 24.71 | 26.98 |
| CDY24391 | Canola | nucleus | 26.45 | 26.92 |
| CDY45849 | Canola | nucleus, plastid | 27.33 | 26.86 |
| CDX84999 | Canola | nucleus | 27.03 | 26.27 |
| CDY36099 | Canola | nucleus | 26.45 | 26.0 |
| CDY16133 | Canola | nucleus | 26.45 | 25.42 |
| CDX99755 | Canola | nucleus | 24.71 | 25.0 |
| CDX98911 | Canola | nucleus | 15.99 | 23.01 |
| CDY70080 | Canola | nucleus | 15.99 | 23.01 |
| CDX83547 | Canola | nucleus | 20.06 | 21.3 |
| CDY37109 | Canola | nucleus | 18.9 | 19.52 |
| CDY29599 | Canola | nucleus | 18.02 | 19.08 |
| CDY22814 | Canola | nucleus | 18.31 | 18.69 |
| CDY65812 | Canola | nucleus | 14.83 | 18.15 |
| CDY29620 | Canola | nucleus | 17.73 | 17.73 |
| CDY35575 | Canola | nucleus | 17.73 | 17.68 |
| CDY37130 | Canola | nucleus | 17.15 | 17.4 |
| CDY22826 | Canola | nucleus | 16.86 | 17.16 |
| CDY46564 | Canola | nucleus | 16.57 | 16.81 |
| CDY51249 | Canola | nucleus | 16.57 | 16.81 |
| CDY22801 | Canola | nucleus | 16.28 | 16.09 |
| CDY25209 | Canola | nucleus | 16.57 | 16.06 |
| CDY37108 | Canola | nucleus, plastid | 15.99 | 16.04 |
Protein Annotations
| EnsemblPlants:CDX90001 | EnsemblPlantsGene:GSBRNA2T00150499001 | Gene3D:2.40.330.10 | GO:A0A078DL81 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:B3_DNA-bd | InterPro:DNA-bd_pseudobarrel_sf | InterPro:IPR003340 | InterPro:IPR015300 |
| PANTHER:PTHR31140 | PANTHER:PTHR31140:SF4 | PFAM:PF02362 | PFscan:PS50863 | ProteinID:CDX90001 | ProteinID:CDX90001.1 |
| SEG:seg | SMART:SM01019 | SUPFAM:SSF101936 | UniParc:UPI0004EF2CB3 | MapMan:15.5.5.3 | : |
Description
BnaA10g00810D
Coordinates
chrLK031861:-:1183353..1185034
Molecular Weight (calculated)
38957.5 Da
IEP (calculated)
6.804
GRAVY (calculated)
-0.766
Length
344 amino acids
Sequence
(BLAST)
(BLAST)
001: MDLSLAPTSS DQEQDKDQEL ASNIGASSSS GTANNTNFPM MMIPPPEKEH MFDKVVTPSD VGKLNRLVIP KQHAERYFPL DSTNNQNGTL LNFQDRNGKM
101: WRFRYSYWNS SQSYVMTKGW SRFVKEKKLD AGDIVSFQRG IGDESQRSKL YIDWRHRPDM SLVQTHQFGN YGFNFNFPTT SQYSNRFHPL PEYNSVPIHR
201: SLNIGNHQRS YYNNQRQEFV GYGYGNLAYY TGSPLDQRSI VGSEPLVIES VPVVPGRLPP VMMLPPPLPP PPSTAGKRLR LFGVNMECGN DYDQHEESLL
301: VPRGEMGASS SSALRFNLSN DHDDGDDDQF AKKGKSSFSL DFSP
101: WRFRYSYWNS SQSYVMTKGW SRFVKEKKLD AGDIVSFQRG IGDESQRSKL YIDWRHRPDM SLVQTHQFGN YGFNFNFPTT SQYSNRFHPL PEYNSVPIHR
201: SLNIGNHQRS YYNNQRQEFV GYGYGNLAYY TGSPLDQRSI VGSEPLVIES VPVVPGRLPP VMMLPPPLPP PPSTAGKRLR LFGVNMECGN DYDQHEESLL
301: VPRGEMGASS SSALRFNLSN DHDDGDDDQF AKKGKSSFSL DFSP
001: MDLSLAPTTT TSSDQEQDRD QELTSNIGAS SSSGPSGNNN NLPMMMIPPP EKEHMFDKVV TPSDVGKLNR LVIPKQHAER YFPLDSSNNQ NGTLLNFQDR
101: NGKMWRFRYS YWNSSQSYVM TKGWSRFVKE KKLDAGDIVS FQRGIGDESE RSKLYIDWRH RPDMSLVQAH QFGNFGFNFN FPTTSQYSNR FHPLPEYNSV
201: PIHRGLNIGN HQRSYYNTQR QEFVGYGYGN LAGRCYYTGS PLDHRNIVGS EPLVIDSVPV VPGRLTPVML PPLPPPPSTA GKRLRLFGVN MECGNDYNQQ
301: EESWLVPRGE IGASSSSSSA LRLNLSTDHD DDNDDGDDGD DDQFAKKGKS SLSLNFNP
101: NGKMWRFRYS YWNSSQSYVM TKGWSRFVKE KKLDAGDIVS FQRGIGDESE RSKLYIDWRH RPDMSLVQAH QFGNFGFNFN FPTTSQYSNR FHPLPEYNSV
201: PIHRGLNIGN HQRSYYNTQR QEFVGYGYGN LAGRCYYTGS PLDHRNIVGS EPLVIDSVPV VPGRLTPVML PPLPPPPSTA GKRLRLFGVN MECGNDYNQQ
301: EESWLVPRGE IGASSSSSSA LRLNLSTDHD DDNDDGDDGD DDQFAKKGKS SLSLNFNP
Arabidopsis Description
NGA3NGA3 [Source:UniProtKB/TrEMBL;Acc:A0A178W3T3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.