Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra003482.1-P | Field mustard | nucleus | 94.96 | 92.31 |
| CDX67872 | Canola | nucleus | 93.88 | 91.58 |
| CDX76605 | Canola | nucleus | 84.89 | 80.82 |
| CDY11388 | Canola | nucleus | 84.89 | 80.82 |
| AT3G61970.1 | Thale cress | nucleus | 84.53 | 78.6 |
| CDY58764 | Canola | nucleus | 84.53 | 73.44 |
| CDY58763 | Canola | nucleus | 83.81 | 73.27 |
| Zm00001d035982_P001 | Maize | nucleus | 18.7 | 59.09 |
| CDY27515 | Canola | nucleus | 63.67 | 58.22 |
| CDY48008 | Canola | nucleus | 63.67 | 58.22 |
| CDX83351 | Canola | nucleus | 62.95 | 56.82 |
| CDY50908 | Canola | nucleus | 63.31 | 55.87 |
| CDX80053 | Canola | nucleus | 59.35 | 55.56 |
| CDY41564 | Canola | nucleus | 59.35 | 55.56 |
| CDY67348 | Canola | nucleus | 25.18 | 46.67 |
| CDY43060 | Canola | cytosol | 24.1 | 41.1 |
| Os06t0107800-02 | Rice | nucleus | 29.14 | 40.7 |
| Zm00001d048815_P001 | Maize | nucleus | 33.81 | 40.52 |
| TraesCS7A01G461000.1 | Wheat | nucleus | 28.42 | 40.51 |
| TraesCS7D01G448900.1 | Wheat | nucleus | 28.06 | 39.8 |
| TraesCS7A01G020800.1 | Wheat | nucleus | 28.06 | 39.39 |
| TraesCS7B01G362500.1 | Wheat | nucleus | 27.7 | 39.29 |
| HORVU0Hr1G022200.1 | Barley | nucleus | 28.06 | 39.0 |
| GSMUA_Achr4P26430_001 | Banana | nucleus | 34.89 | 38.8 |
| GSMUA_Achr4P30170_001 | Banana | nucleus | 34.53 | 38.55 |
| Zm00001d029749_P001 | Maize | nucleus | 37.41 | 38.1 |
| Os03t0120900-01 | Rice | nucleus | 42.45 | 37.94 |
| TraesCS4B01G348500.1 | Wheat | nucleus | 43.53 | 37.93 |
| EER92015 | Sorghum | nucleus | 37.05 | 37.59 |
| KXG19112 | Sorghum | nucleus | 27.7 | 37.56 |
| Zm00001d047359_P001 | Maize | nucleus | 37.41 | 37.55 |
| TraesCS5A01G516600.1 | Wheat | nucleus | 42.45 | 37.22 |
| Zm00001d010077_P001 | Maize | nucleus | 34.53 | 37.07 |
| TraesCS4A01G472700.1 | Wheat | nucleus | 28.78 | 36.87 |
| TraesCS7D01G017000.1 | Wheat | nucleus | 28.78 | 36.87 |
| TraesCS7A01G020700.1 | Wheat | nucleus | 28.42 | 36.74 |
| OQU93364 | Sorghum | nucleus | 43.17 | 36.36 |
| TraesCS1B01G215000.1 | Wheat | nucleus | 35.97 | 36.36 |
| CDX84162 | Canola | nucleus | 31.65 | 36.21 |
| CDY43751 | Canola | nucleus | 31.65 | 36.21 |
| Zm00001d027409_P001 | Maize | nucleus | 42.45 | 36.09 |
| CDX90001 | Canola | nucleus | 44.6 | 36.05 |
| HORVU7Hr1G002230.1 | Barley | nucleus | 28.42 | 35.91 |
| CDY15208 | Canola | nucleus | 41.37 | 35.71 |
| Zm00001d024103_P001 | Maize | nucleus | 28.78 | 35.71 |
| Zm00001d035903_P001 | Maize | nucleus | 28.78 | 35.71 |
| TraesCS1A01G200500.1 | Wheat | nucleus | 35.61 | 35.61 |
| CDX75073 | Canola | nucleus | 31.65 | 35.48 |
| Os10t0537100-00 | Rice | nucleus | 39.57 | 35.26 |
| GSMUA_Achr5P12850_001 | Banana | nucleus | 26.62 | 35.07 |
| CDX73868 | Canola | nucleus | 29.5 | 34.75 |
| CDY08512 | Canola | nucleus | 30.94 | 34.68 |
| HORVU4Hr1G084950.3 | Barley | nucleus | 42.09 | 34.31 |
| HORVU1Hr1G051780.2 | Barley | nucleus | 35.97 | 34.13 |
| KXG19111 | Sorghum | nucleus | 29.14 | 34.03 |
| TraesCS1D01G203900.1 | Wheat | nucleus | 35.61 | 34.02 |
| CDY62470 | Canola | nucleus | 27.7 | 33.77 |
| HORVU7Hr1G046950.1 | Barley | nucleus | 33.09 | 33.58 |
| CDY01036 | Canola | nucleus | 30.94 | 33.46 |
| GSMUA_Achr1P03600_001 | Banana | nucleus | 39.21 | 33.03 |
| GSMUA_Achr7P04630_001 | Banana | nucleus | 24.46 | 33.01 |
| Os04t0581400-01 | Rice | nucleus | 34.53 | 32.76 |
| GSMUA_Achr4P12210_001 | Banana | nucleus | 26.26 | 32.59 |
| Zm00001d024545_P001 | Maize | nucleus | 29.14 | 32.53 |
| GSMUA_Achr4P24970_001 | Banana | nucleus | 27.34 | 32.34 |
| CDY47260 | Canola | nucleus | 30.22 | 31.46 |
| EES13386 | Sorghum | nucleus | 28.42 | 31.23 |
| GSMUA_AchrUn_... | Banana | cytosol | 26.62 | 30.71 |
| Os02t0683500-01 | Rice | nucleus | 44.6 | 30.1 |
| KRG97268 | Soybean | nucleus | 44.6 | 30.02 |
| KRH68988 | Soybean | nucleus | 44.6 | 29.52 |
| HORVU6Hr1G066190.2 | Barley | nucleus | 43.17 | 29.34 |
| TraesCS6B01G286900.1 | Wheat | nucleus | 43.17 | 29.34 |
| GSMUA_Achr5P20340_001 | Banana | nucleus | 35.25 | 29.08 |
| Os08t0157700-00 | Rice | nucleus | 29.86 | 28.92 |
| VIT_15s0048g02370.t01 | Wine grape | nucleus | 47.84 | 28.85 |
| TraesCS6A01G259600.1 | Wheat | nucleus | 42.81 | 28.74 |
| TraesCS6D01G240600.1 | Wheat | nucleus | 42.81 | 28.74 |
| GSMUA_Achr5P10220_001 | Banana | nucleus | 27.7 | 28.31 |
| Zm00001d026005_P001 | Maize | nucleus | 41.01 | 28.22 |
| CDX97251 | Canola | nucleus | 34.17 | 28.02 |
| CDX80996 | Canola | nucleus | 27.7 | 28.0 |
| TraesCS2A01G394700.1 | Wheat | nucleus | 40.65 | 27.97 |
| TraesCS2B01G412700.1 | Wheat | nucleus | 41.01 | 27.87 |
| TraesCS2D01G392400.1 | Wheat | nucleus | 41.01 | 27.87 |
| Zm00001d002562_P001 | Maize | nucleus | 41.01 | 27.87 |
| CDY07140 | Canola | nucleus | 30.58 | 27.78 |
| CDY49614 | Canola | nucleus | 30.94 | 27.74 |
| GSMUA_Achr9P18780_001 | Banana | nucleus | 28.42 | 27.62 |
| EES12712 | Sorghum | nucleus | 41.01 | 27.14 |
| GSMUA_Achr2P00400_001 | Banana | nucleus | 28.06 | 27.08 |
| Zm00001d017618_P001 | Maize | nucleus | 41.01 | 27.01 |
| Zm00001d051471_P001 | Maize | nucleus | 40.65 | 26.9 |
| GSMUA_Achr2P10230_001 | Banana | nucleus | 29.14 | 26.64 |
| VIT_02s0025g03000.t01 | Wine grape | nucleus | 42.45 | 25.88 |
| EES07445 | Sorghum | nucleus | 40.29 | 25.81 |
| KRH47753 | Soybean | nucleus | 46.4 | 25.8 |
| CDX81561 | Canola | nucleus | 31.65 | 25.66 |
| CDY45849 | Canola | nucleus, plastid | 32.01 | 25.43 |
| CDX97996 | Canola | nucleus | 29.14 | 24.92 |
| CDY24391 | Canola | nucleus | 30.22 | 24.85 |
| CDY61361 | Canola | nucleus | 29.14 | 24.77 |
| CDY36099 | Canola | nucleus | 30.94 | 24.57 |
| CDY58354 | Canola | nucleus | 28.78 | 24.54 |
| CDY72302 | Canola | nucleus | 28.78 | 24.54 |
| CDY40973 | Canola | nucleus | 26.98 | 23.81 |
| CDY16133 | Canola | nucleus | 30.22 | 23.46 |
| CDX84999 | Canola | nucleus | 29.86 | 23.45 |
| KRH06334 | Soybean | nucleus | 47.12 | 22.51 |
| CDX99755 | Canola | nucleus | 27.34 | 22.35 |
| CDX98911 | Canola | nucleus | 18.7 | 21.76 |
| CDY70080 | Canola | nucleus | 18.7 | 21.76 |
| CDX83547 | Canola | nucleus | 21.22 | 18.21 |
| CDY37109 | Canola | nucleus | 21.58 | 18.02 |
| CDY29599 | Canola | nucleus | 20.86 | 17.85 |
| CDY22814 | Canola | nucleus | 20.86 | 17.21 |
| CDY65812 | Canola | nucleus | 16.91 | 16.73 |
| CDY37130 | Canola | nucleus | 20.14 | 16.52 |
| CDY29620 | Canola | nucleus | 20.14 | 16.28 |
| CDY22826 | Canola | nucleus | 19.78 | 16.27 |
| CDY35575 | Canola | nucleus | 20.14 | 16.23 |
| CDY46564 | Canola | nucleus | 19.78 | 16.22 |
| CDY51249 | Canola | nucleus | 19.78 | 16.22 |
| CDY22801 | Canola | nucleus | 19.42 | 15.52 |
| CDY25209 | Canola | nucleus | 19.42 | 15.21 |
| CDY37108 | Canola | nucleus, plastid | 17.99 | 14.58 |
Protein Annotations
| MapMan:15.5.5.3 | Gene3D:2.40.330.10 | GO:A0A078JVB1 | UniProt:A0A078JVB1 | InterPro:B3_DNA-bd | EnsemblPlants:CDY69432 |
| ProteinID:CDY69432 | ProteinID:CDY69432.1 | InterPro:DNA-bd_pseudobarrel_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| EnsemblPlantsGene:GSBRNA2T00087759001 | InterPro:IPR003340 | InterPro:IPR015300 | PFAM:PF02362 | PFscan:PS50863 | PANTHER:PTHR31140 |
| PANTHER:PTHR31140:SF4 | SMART:SM01019 | SUPFAM:SSF101936 | UniParc:UPI0004EE3C1C | SEG:seg | : |
Description
BnaCnng63450DBnaCnng63450D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JVB1]
Coordinates
chrLK039422:-:1587..2677
Molecular Weight (calculated)
31569.1 Da
IEP (calculated)
8.422
GRAVY (calculated)
-0.678
Length
278 amino acids
Sequence
(BLAST)
(BLAST)
001: MNLEEEKPVE KASSMEREHM FEKVVTPSDV GKLNRLVIPK QHAERYFPLD NSDNNKGLLL NFEDRTGNSW RFRYSYWNSS QSYVMTKGWS RFVKDKKLDA
101: GDIVSFQRDP GNKEKLFIDW RRRPKIPDHP HQFAGAMFPR FYSFSHPQNL YHRYQQDLGI GYYVRSMERN DSTAVIESVP VIMQRRAAHV AAIPSSRGEK
201: RLRLFGVDME CGGGGSVNST EEESSSSGGG GGVSMASVGS LLQLRLVSSD DESLVAMEAA SVDEDHHLFT KKGNFRFG
101: GDIVSFQRDP GNKEKLFIDW RRRPKIPDHP HQFAGAMFPR FYSFSHPQNL YHRYQQDLGI GYYVRSMERN DSTAVIESVP VIMQRRAAHV AAIPSSRGEK
201: RLRLFGVDME CGGGGSVNST EEESSSSGGG GGVSMASVGS LLQLRLVSSD DESLVAMEAA SVDEDHHLFT KKGNFRFG
001: MDLSLAPTTT TSSDQEQDRD QELTSNIGAS SSSGPSGNNN NLPMMMIPPP EKEHMFDKVV TPSDVGKLNR LVIPKQHAER YFPLDSSNNQ NGTLLNFQDR
101: NGKMWRFRYS YWNSSQSYVM TKGWSRFVKE KKLDAGDIVS FQRGIGDESE RSKLYIDWRH RPDMSLVQAH QFGNFGFNFN FPTTSQYSNR FHPLPEYNSV
201: PIHRGLNIGN HQRSYYNTQR QEFVGYGYGN LAGRCYYTGS PLDHRNIVGS EPLVIDSVPV VPGRLTPVML PPLPPPPSTA GKRLRLFGVN MECGNDYNQQ
301: EESWLVPRGE IGASSSSSSA LRLNLSTDHD DDNDDGDDGD DDQFAKKGKS SLSLNFNP
101: NGKMWRFRYS YWNSSQSYVM TKGWSRFVKE KKLDAGDIVS FQRGIGDESE RSKLYIDWRH RPDMSLVQAH QFGNFGFNFN FPTTSQYSNR FHPLPEYNSV
201: PIHRGLNIGN HQRSYYNTQR QEFVGYGYGN LAGRCYYTGS PLDHRNIVGS EPLVIDSVPV VPGRLTPVML PPLPPPPSTA GKRLRLFGVN MECGNDYNQQ
301: EESWLVPRGE IGASSSSSSA LRLNLSTDHD DDNDDGDDGD DDQFAKKGKS SLSLNFNP
Arabidopsis Description
NGA3NGA3 [Source:UniProtKB/TrEMBL;Acc:A0A178W3T3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.