Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr7P04630_001 | Banana | nucleus | 51.04 | 59.71 |
| GSMUA_Achr4P12210_001 | Banana | nucleus | 41.08 | 44.2 |
| GSMUA_Achr5P12850_001 | Banana | nucleus | 32.37 | 36.97 |
| CDY67348 | Canola | nucleus | 22.82 | 36.67 |
| GSMUA_Achr9P08980_001 | Banana | nucleus | 24.07 | 35.8 |
| TraesCS7A01G020800.1 | Wheat | nucleus | 29.05 | 35.35 |
| GSMUA_Achr11P... | Banana | nucleus | 26.97 | 35.14 |
| GSMUA_Achr4P24970_001 | Banana | nucleus | 33.61 | 34.47 |
| TraesCS7A01G461000.1 | Wheat | nucleus | 27.8 | 34.36 |
| TraesCS7D01G448900.1 | Wheat | nucleus | 27.8 | 34.18 |
| TraesCS7B01G362500.1 | Wheat | nucleus | 27.39 | 33.67 |
| GSMUA_Achr4P26430_001 | Banana | nucleus | 34.02 | 32.8 |
| TraesCS4A01G472700.1 | Wheat | nucleus | 29.46 | 32.72 |
| Zm00001d035903_P001 | Maize | nucleus | 30.29 | 32.59 |
| TraesCS7A01G020700.1 | Wheat | nucleus | 29.05 | 32.56 |
| CDY43060 | Canola | cytosol | 21.99 | 32.52 |
| HORVU0Hr1G022200.1 | Barley | nucleus | 26.97 | 32.5 |
| TraesCS7D01G017000.1 | Wheat | nucleus | 29.05 | 32.26 |
| GSMUA_Achr4P30170_001 | Banana | nucleus | 33.2 | 32.13 |
| Os06t0107800-02 | Rice | nucleus | 26.14 | 31.66 |
| Zm00001d024103_P001 | Maize | nucleus | 29.05 | 31.25 |
| KXG19112 | Sorghum | nucleus | 26.56 | 31.22 |
| GSMUA_Achr3P19210_001 | Banana | nucleus | 25.73 | 30.85 |
| GSMUA_Achr9P02600_001 | Banana | nucleus | 24.48 | 30.57 |
| GSMUA_Achr2P00400_001 | Banana | nucleus | 36.51 | 30.56 |
| GSMUA_Achr5P10220_001 | Banana | nucleus | 34.44 | 30.51 |
| HORVU7Hr1G002230.1 | Barley | nucleus | 27.8 | 30.45 |
| GSMUA_Achr9P18780_001 | Banana | nucleus | 36.1 | 30.42 |
| Solyc08g013700.1.1 | Tomato | nucleus | 36.1 | 29.59 |
| PGSC0003DMT400015010 | Potato | nucleus | 36.1 | 29.0 |
| GSMUA_Achr6P13140_001 | Banana | nucleus | 29.05 | 28.34 |
| Bra040478.1-P | Field mustard | nucleus | 34.44 | 28.33 |
| KXG19111 | Sorghum | nucleus | 27.8 | 28.15 |
| AT2G46870.1 | Thale cress | nucleus | 36.1 | 28.06 |
| CDY48008 | Canola | nucleus | 35.27 | 27.96 |
| PGSC0003DMT400015011 | Potato | nucleus | 36.1 | 27.8 |
| CDY27515 | Canola | nucleus | 34.85 | 27.63 |
| CDY41564 | Canola | nucleus | 34.02 | 27.61 |
| CDX80053 | Canola | nucleus | 34.02 | 27.61 |
| Bra004501.1-P | Field mustard | nucleus | 34.02 | 27.61 |
| CDX83351 | Canola | nucleus | 34.85 | 27.27 |
| Solyc08g013690.1.1 | Tomato | nucleus | 36.51 | 27.16 |
| Bra000434.1-P | Field mustard | nucleus | 34.85 | 27.1 |
| GSMUA_Achr1P03600_001 | Banana | nucleus | 36.93 | 26.97 |
| GSMUA_Achr6P35600_001 | Banana | nucleus | 26.97 | 26.86 |
| CDY50908 | Canola | nucleus | 34.85 | 26.67 |
| CDY69432 | Canola | nucleus | 30.71 | 26.62 |
| GSMUA_Achr2P10230_001 | Banana | nucleus | 33.2 | 26.32 |
| CDX67872 | Canola | nucleus | 31.12 | 26.32 |
| Bra003482.1-P | Field mustard | nucleus | 31.12 | 26.22 |
| Zm00001d024545_P001 | Maize | nucleus | 26.97 | 26.1 |
| Bra007646.1-P | Field mustard | nucleus | 31.54 | 26.03 |
| CDX76605 | Canola | nucleus | 31.54 | 26.03 |
| CDY11388 | Canola | nucleus | 31.54 | 26.03 |
| CDX90001 | Canola | nucleus | 36.93 | 25.87 |
| AT3G61970.1 | Thale cress | nucleus | 31.95 | 25.75 |
| GSMUA_Achr1P21250_001 | Banana | nucleus | 31.12 | 25.51 |
| CDY15208 | Canola | nucleus | 34.02 | 25.47 |
| EES13386 | Sorghum | nucleus | 26.56 | 25.3 |
| Bra033294.1-P | Field mustard | nucleus | 36.1 | 25.29 |
| Bra030497.1-P | Field mustard | nucleus | 36.93 | 25.14 |
| Os08t0157700-00 | Rice | nucleus | 29.88 | 25.09 |
| CDY58763 | Canola | nucleus | 32.78 | 24.84 |
| Bra014415.1-P | Field mustard | nucleus | 32.78 | 24.69 |
| CDY58764 | Canola | nucleus | 32.78 | 24.69 |
| Solyc08g083400.2.1 | Tomato | nucleus | 34.02 | 24.55 |
| AT1G01030.1 | Thale cress | nucleus | 35.68 | 24.02 |
| GSMUA_Achr5P09950_001 | Banana | nucleus | 31.54 | 23.6 |
| GSMUA_Achr6P09880_001 | Banana | nucleus | 28.22 | 23.53 |
| GSMUA_Achr1P05400_001 | Banana | nucleus | 29.05 | 23.49 |
| GSMUA_Achr6P01420_001 | Banana | nucleus | 30.71 | 23.42 |
| GSMUA_Achr6P18320_001 | Banana | nucleus | 32.37 | 22.94 |
| GSMUA_Achr5P20340_001 | Banana | nucleus | 31.95 | 22.85 |
| AT4G01500.1 | Thale cress | nucleus | 31.12 | 22.52 |
| PGSC0003DMT400031863 | Potato | nucleus | 36.93 | 21.92 |
| GSMUA_Achr3P29380_001 | Banana | nucleus | 23.65 | 21.67 |
| GSMUA_Achr2P22560_001 | Banana | nucleus | 26.97 | 20.97 |
| VIT_02s0025g03000.t01 | Wine grape | nucleus | 39.0 | 20.61 |
| KRH68988 | Soybean | nucleus | 35.27 | 20.24 |
| Bra008552.1-P | Field mustard | nucleus | 28.22 | 20.12 |
| KRG97268 | Soybean | nucleus | 34.44 | 20.1 |
| CDX97251 | Canola | nucleus | 28.22 | 20.06 |
| GSMUA_AchrUn_... | Banana | nucleus | 31.12 | 20.05 |
| CDY07140 | Canola | nucleus | 24.48 | 19.28 |
| VIT_15s0048g02370.t01 | Wine grape | nucleus | 36.51 | 19.09 |
| CDY49614 | Canola | nucleus | 24.48 | 19.03 |
| Bra037417.1-P | Field mustard | nucleus | 24.48 | 19.03 |
| KRH47753 | Soybean | nucleus | 37.34 | 18.0 |
| GSMUA_Achr4P06710_001 | Banana | nucleus | 25.31 | 17.43 |
| GSMUA_Achr11P... | Banana | nucleus | 23.65 | 16.96 |
| GSMUA_Achr9P21470_001 | Banana | nucleus | 21.58 | 16.77 |
| GSMUA_Achr3P21100_001 | Banana | nucleus | 27.8 | 16.26 |
| GSMUA_Achr4P03670_001 | Banana | nucleus | 19.5 | 15.99 |
| KRH06334 | Soybean | nucleus | 36.93 | 15.29 |
| GSMUA_Achr10P... | Banana | nucleus | 18.26 | 15.07 |
| GSMUA_Achr8P14650_001 | Banana | nucleus | 25.73 | 14.98 |
Protein Annotations
| Gene3D:2.40.330.10 | MapMan:35.1 | InterPro:B3_DNA-bd | InterPro:DNA-bd_pseudobarrel_sf | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | EnsemblPlantsGene:GSMUA_AchrUn_randomG04070_001 | EnsemblPlants:GSMUA_AchrUn_randomP04070_001 | EnsemblPlants:GSMUA_AchrUn_randomT04070_001 | InterPro:IPR003340 | InterPro:IPR015300 |
| UniProt:M0U669 | PANTHER:PTHR31140 | PANTHER:PTHR31140:SF4 | SUPFAM:SSF101936 | UniParc:UPI0002960BA5 | SEG:seg |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG04070_001]
Coordinates
chrchrUn_random:-:17843369..17844199
Molecular Weight (calculated)
27013.2 Da
IEP (calculated)
9.920
GRAVY (calculated)
-0.499
Length
241 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGFGVETPS SSSFLWIPSV AELVRRAPAR LLDRELMFDK VVTPSDVGKL NRLVIPKQHA ESQSYVITKG WCRFVKEKQL DAGDTVSFFR ARSGEAGQRR
101: RLFIDLQRRR HRPRPVGHQG VLIASTAPPL RGSWLPHFYY GSVVPPQHVG AQAAAGRADM GSMPAVLDSV PVVLAAAEPK RIRLFGVNLE CPETEDRKNS
201: PLLPPCQWRT ESDESTDIST ERRQTSMHSH FGCSDREEGR R
101: RLFIDLQRRR HRPRPVGHQG VLIASTAPPL RGSWLPHFYY GSVVPPQHVG AQAAAGRADM GSMPAVLDSV PVVLAAAEPK RIRLFGVNLE CPETEDRKNS
201: PLLPPCQWRT ESDESTDIST ERRQTSMHSH FGCSDREEGR R
001: MDLSLAPTTT TSSDQEQDRD QELTSNIGAS SSSGPSGNNN NLPMMMIPPP EKEHMFDKVV TPSDVGKLNR LVIPKQHAER YFPLDSSNNQ NGTLLNFQDR
101: NGKMWRFRYS YWNSSQSYVM TKGWSRFVKE KKLDAGDIVS FQRGIGDESE RSKLYIDWRH RPDMSLVQAH QFEYNSVPIH RGLNIGNHQR SYYNTQRQEF
201: VGYGYGNLAG RCYYTGSPLD HRNIVGSEPL VIDSVPVVPG RLTPVMLPPL PPPPSTAGKR LRLFGVNMEC GNDYNQQEES WLVPRGEIGA SSSSSSALRL
301: NLSTDHDDDN DDGDDGDDDQ FAKKGKSSLS LNFNP
101: NGKMWRFRYS YWNSSQSYVM TKGWSRFVKE KKLDAGDIVS FQRGIGDESE RSKLYIDWRH RPDMSLVQAH QFEYNSVPIH RGLNIGNHQR SYYNTQRQEF
201: VGYGYGNLAG RCYYTGSPLD HRNIVGSEPL VIDSVPVVPG RLTPVMLPPL PPPPSTAGKR LRLFGVNMEC GNDYNQQEES WLVPRGEIGA SSSSSSALRL
301: NLSTDHDDDN DDGDDGDDDQ FAKKGKSSLS LNFNP
Arabidopsis Description
NGA3NGA3 [Source:UniProtKB/TrEMBL;Acc:A0A178W3T3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.