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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 6
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:mitochondrion, nucleus
BaCelLo:nucleus
EpiLoc:nucleus
MultiLoc:nucleus
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr4P26430_001 Banana nucleus 63.86 63.6
GSMUA_Achr5P12850_001 Banana nucleus 50.6 59.72
Zm00001d035982_P001 Maize nucleus 20.48 57.95
GSMUA_Achr4P24970_001 Banana nucleus 42.97 45.53
GSMUA_Achr2P10230_001 Banana nucleus 53.82 44.08
GSMUA_Achr9P18780_001 Banana nucleus 48.59 42.31
CDY67348 Canola nucleus 25.3 42.0
GSMUA_Achr1P03600_001 Banana nucleus 55.42 41.82
GSMUA_Achr3P19210_001 Banana nucleus 33.73 41.79
Zm00001d048815_P001 Maize nucleus 38.55 41.38
GSMUA_Achr5P10220_001 Banana nucleus 44.98 41.18
GSMUA_Achr9P02600_001 Banana nucleus 31.73 40.93
EER92015 Sorghum nucleus 44.98 40.88
Zm00001d047359_P001 Maize nucleus 45.38 40.79
Zm00001d029749_P001 Maize nucleus 44.58 40.66
Zm00001d010077_P001 Maize nucleus 41.77 40.15
GSMUA_Achr2P00400_001 Banana nucleus 45.78 39.58
TraesCS1A01G200500.1 Wheat nucleus 44.18 39.57
TraesCS1B01G215000.1 Wheat nucleus 43.37 39.27
Os03t0120900-01 Rice nucleus 48.59 38.91
TraesCS5A01G516600.1 Wheat nucleus 49.4 38.8
TraesCS4B01G348500.1 Wheat nucleus 49.0 38.24
CDY43060 Canola cytosol 24.9 38.04
TraesCS1D01G203900.1 Wheat nucleus 44.18 37.8
OQU93364 Sorghum nucleus 49.4 37.27
HORVU1Hr1G051780.2 Barley nucleus 43.78 37.2
Os10t0537100-00 Rice nucleus 46.18 36.86
Zm00001d027409_P001 Maize nucleus 48.19 36.7
Solyc08g013700.1.1 Tomato nucleus 42.57 36.05
GSMUA_Achr6P35600_001 Banana nucleus 34.94 35.95
Bra040478.1-P Field mustard nucleus 42.17 35.84
Os04t0581400-01 Rice nucleus 42.17 35.84
CDY41564 Canola nucleus 42.57 35.69
Bra004501.1-P Field mustard nucleus 42.17 35.35
CDX80053 Canola nucleus 42.17 35.35
GSMUA_Achr6P13140_001 Banana nucleus 34.94 35.22
GSMUA_Achr9P08980_001 Banana nucleus 22.89 35.19
GSMUA_Achr7P04630_001 Banana nucleus 28.92 34.95
CDY48008 Canola nucleus 42.57 34.87
CDX67872 Canola nucleus 39.76 34.74
PGSC0003DMT400015010 Potato nucleus 41.77 34.67
Bra003482.1-P Field mustard nucleus 39.76 34.62
HORVU4Hr1G084950.3 Barley nucleus 47.39 34.6
CDY50908 Canola nucleus 43.78 34.6
Solyc08g013690.1.1 Tomato nucleus 44.98 34.57
CDY27515 Canola nucleus 42.17 34.54
CDY69432 Canola nucleus 38.55 34.53
Bra000434.1-P Field mustard nucleus 42.97 34.52
PGSC0003DMT400015011 Potato nucleus 43.37 34.5
CDX83351 Canola nucleus 42.57 34.42
GSMUA_Achr11P... Banana nucleus 25.3 34.05
HORVU7Hr1G046950.1 Barley nucleus 37.35 33.94
Bra007646.1-P Field mustard nucleus 39.76 33.9
CDX76605 Canola nucleus 39.76 33.9
CDY11388 Canola nucleus 39.76 33.9
AT3G61970.1 Thale cress nucleus 40.16 33.44
AT2G46870.1 Thale cress nucleus 41.37 33.23
GSMUA_AchrUn_... Banana cytosol 32.13 33.2
Zm00001d002562_P001 Maize nucleus 53.82 32.76
CDX90001 Canola nucleus 44.98 32.56
Os02t0683500-01 Rice nucleus 53.82 32.52
TraesCS2D01G392400.1 Wheat nucleus 53.41 32.52
Bra030497.1-P Field mustard nucleus 46.18 32.49
Zm00001d026005_P001 Maize nucleus 52.61 32.43
EES12712 Sorghum nucleus 54.62 32.38
TraesCS6D01G240600.1 Wheat nucleus 53.82 32.37
CDY15208 Canola nucleus 41.77 32.3
TraesCS2B01G412700.1 Wheat nucleus 53.01 32.27
TraesCS6B01G286900.1 Wheat nucleus 53.01 32.27
TraesCS2A01G394700.1 Wheat nucleus 52.21 32.18
TraesCS6A01G259600.1 Wheat nucleus 53.41 32.13
Bra033294.1-P Field mustard nucleus 44.18 31.98
AT1G01030.1 Thale cress nucleus 45.78 31.84
HORVU6Hr1G066190.2 Barley nucleus 52.21 31.78
Solyc08g083400.2.1 Tomato nucleus 42.57 31.74
GSMUA_Achr4P12210_001 Banana nucleus 28.11 31.25
CDY58763 Canola nucleus 39.76 31.13
Bra014415.1-P Field mustard nucleus 39.76 30.94
CDY58764 Canola nucleus 39.76 30.94
PGSC0003DMT400031863 Potato nucleus 49.8 30.54
Zm00001d051471_P001 Maize nucleus 51.0 30.24
Zm00001d017618_P001 Maize nucleus 50.6 29.86
GSMUA_Achr5P20340_001 Banana nucleus 40.16 29.67
GSMUA_Achr1P21250_001 Banana nucleus 34.94 29.59
GSMUA_Achr5P09950_001 Banana nucleus 37.35 28.88
EES07445 Sorghum nucleus 49.8 28.57
KRG97268 Soybean nucleus 46.99 28.33
KRH68988 Soybean nucleus 46.99 27.86
GSMUA_Achr1P05400_001 Banana nucleus 33.33 27.85
GSMUA_Achr6P01420_001 Banana nucleus 34.94 27.53
VIT_02s0025g03000.t01 Wine grape nucleus 49.8 27.19
GSMUA_Achr2P22560_001 Banana nucleus 33.33 26.77
VIT_15s0048g02370.t01 Wine grape nucleus 48.59 26.25
CDY07140 Canola nucleus 31.33 25.49
Bra037417.1-P Field mustard nucleus 31.33 25.16
CDY49614 Canola nucleus 31.33 25.16
AT4G01500.1 Thale cress nucleus 33.33 24.92
CDX97251 Canola nucleus 33.33 24.48
Bra008552.1-P Field mustard nucleus 32.93 24.26
KRH47753 Soybean nucleus 48.59 24.2
GSMUA_AchrUn_... Banana nucleus 34.94 23.26
GSMUA_Achr6P09880_001 Banana nucleus 26.91 23.18
GSMUA_Achr4P06710_001 Banana nucleus 31.73 22.57
KRH06334 Soybean nucleus 50.6 21.65
GSMUA_Achr3P29380_001 Banana nucleus 22.49 21.29
GSMUA_Achr10P... Banana nucleus 24.1 20.55
GSMUA_Achr3P21100_001 Banana nucleus 33.33 20.15
GSMUA_Achr4P03670_001 Banana nucleus 23.69 20.07
GSMUA_Achr6P18320_001 Banana nucleus 27.31 20.0
GSMUA_Achr9P21470_001 Banana nucleus 24.1 19.35
GSMUA_Achr8P14650_001 Banana nucleus 26.1 15.7
GSMUA_Achr11P... Banana nucleus 19.68 14.58
Protein Annotations
MapMan:15.5.5.3Gene3D:2.40.330.10InterPro:B3_DNA-bdInterPro:DNA-bd_pseudobarrel_sfGO:GO:0003674GO:GO:0003676
GO:GO:0003677GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634
GO:GO:0006139GO:GO:0006351GO:GO:0006355GO:GO:0008150GO:GO:0008152GO:GO:0009058
GO:GO:0009987EnsemblPlantsGene:GSMUA_Achr4G30170_001EnsemblPlants:GSMUA_Achr4P30170_001EnsemblPlants:GSMUA_Achr4T30170_001InterPro:IPR003340InterPro:IPR015300
UniProt:M0STC9PFAM:PF02362PFscan:PS50863PANTHER:PTHR31140PANTHER:PTHR31140:SF4SMART:SM01019
SUPFAM:SSF101936UniParc:UPI000296DF8BSEG:seg:::
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr4G30170_001]
Coordinates
chr4:-:27869492..27870409
Molecular Weight (calculated)
27706.5 Da
IEP (calculated)
7.962
GRAVY (calculated)
-0.561
Length
249 amino acids
Sequence
(BLAST)
001: MSEQEQEQLE VPEHPPFVTS CPSPSSSSTG FWWHDGSSGG GSGAVGSFVE KEHMFDKVVT PSDVGKLNRL VIPKQHAERY FPLDTLADER GRLLCFEDRT
101: GKPWHFRYSY WNSSQSYVIT RGWSRFVKEK GLDAGDTVSF CRGVGEAGRH RLYIDSSGRV PMLLRSVPLV RDQAAVKRVR LFGVNLNCPE SRDEASHHHS
201: DTLSVSLPQL HPRTAFPLLK PPHASGDTPP DSSSSSICKG KNTPLNLYL
Best Arabidopsis Sequence Match ( AT1G01030.1 )
(BLAST)
001: MDLSLAPTTT TSSDQEQDRD QELTSNIGAS SSSGPSGNNN NLPMMMIPPP EKEHMFDKVV TPSDVGKLNR LVIPKQHAER YFPLDSSNNQ NGTLLNFQDR
101: NGKMWRFRYS YWNSSQSYVM TKGWSRFVKE KKLDAGDIVS FQRGIGDESE RSKLYIDWRH RPDMSLVQAH QFGNFGFNFN FPTTSQYSNR FHPLPEYNSV
201: PIHRGLNIGN HQRSYYNTQR QEFVGYGYGN LAGRCYYTGS PLDHRNIVGS EPLVIDSVPV VPGRLTPVML PPLPPPPSTA GKRLRLFGVN MECGNDYNQQ
301: EESWLVPRGE IGASSSSSSA LRLNLSTDHD DDNDDGDDGD DDQFAKKGKS SLSLNFNP
Arabidopsis Description
NGA3NGA3 [Source:UniProtKB/TrEMBL;Acc:A0A178W3T3]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.