Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 1
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr6P09880_001 | Banana | nucleus | 60.32 | 64.71 |
| GSMUA_Achr1P21250_001 | Banana | nucleus | 56.77 | 59.86 |
| GSMUA_Achr10P... | Banana | nucleus | 54.84 | 58.22 |
| GSMUA_Achr5P09950_001 | Banana | nucleus | 56.13 | 54.04 |
| GSMUA_Achr1P05400_001 | Banana | nucleus | 50.32 | 52.35 |
| CDX97996 | Canola | nucleus | 52.9 | 50.46 |
| GSMUA_Achr3P29380_001 | Banana | nucleus | 42.58 | 50.19 |
| CDY61361 | Canola | nucleus | 52.9 | 50.15 |
| GSMUA_Achr3P21100_001 | Banana | nucleus | 66.45 | 50.0 |
| CDY72302 | Canola | nucleus | 52.26 | 49.69 |
| CDY58354 | Canola | nucleus | 51.94 | 49.39 |
| CDY40973 | Canola | nucleus | 50.0 | 49.21 |
| GSMUA_Achr6P01420_001 | Banana | nucleus | 49.35 | 48.42 |
| Bra019821.1-P | Field mustard | nucleus | 52.9 | 48.09 |
| AT1G13260.1 | Thale cress | nucleus | 52.9 | 47.67 |
| Bra026917.1-P | Field mustard | nucleus | 52.26 | 47.65 |
| AT1G68840.1 | Thale cress | nucleus | 53.55 | 47.16 |
| AT3G25730.1 | Thale cress | nucleus | 50.65 | 47.15 |
| CDY24391 | Canola | nucleus | 51.29 | 47.04 |
| Bra026509.1-P | Field mustard | nucleus | 49.35 | 46.93 |
| CDX99755 | Canola | nucleus | 51.29 | 46.76 |
| CDX81561 | Canola | nucleus | 51.61 | 46.65 |
| KRH34761 | Soybean | nucleus | 52.58 | 46.44 |
| CDX84999 | Canola | nucleus | 52.58 | 46.05 |
| CDY36099 | Canola | nucleus | 51.94 | 46.0 |
| CDY16133 | Canola | nucleus | 52.58 | 45.53 |
| AT1G25560.1 | Thale cress | nucleus | 52.9 | 45.43 |
| GSMUA_Achr4P03670_001 | Banana | nucleus | 42.9 | 45.24 |
| Bra038346.1-P | Field mustard | nucleus, plastid | 50.97 | 45.14 |
| CDY45849 | Canola | nucleus, plastid | 50.97 | 45.14 |
| Bra011002.1-P | Field mustard | nucleus | 51.94 | 44.85 |
| KRG92025 | Soybean | nucleus | 51.94 | 44.48 |
| GSMUA_Achr4P06710_001 | Banana | nucleus | 50.0 | 44.29 |
| KRH75484 | Soybean | nucleus | 54.84 | 44.27 |
| VIT_01s0011g03070.t01 | Wine grape | nucleus | 53.87 | 44.18 |
| Bra024735.1-P | Field mustard | nucleus | 52.58 | 43.82 |
| CDX83547 | Canola | nucleus | 45.48 | 43.52 |
| Solyc05g009790.1.1 | Tomato | nucleus | 54.19 | 42.53 |
| KRH70603 | Soybean | nucleus | 54.84 | 42.39 |
| PGSC0003DMT400002125 | Potato | nucleus | 54.19 | 42.21 |
| GSMUA_Achr3P19210_001 | Banana | nucleus | 26.77 | 41.29 |
| GSMUA_AchrUn_... | Banana | nucleus | 49.68 | 41.18 |
| GSMUA_Achr9P21470_001 | Banana | nucleus | 40.97 | 40.97 |
| GSMUA_Achr9P02600_001 | Banana | nucleus | 24.84 | 39.9 |
| GSMUA_Achr9P08980_001 | Banana | nucleus | 19.35 | 37.04 |
| GSMUA_Achr6P35600_001 | Banana | nucleus | 26.45 | 33.88 |
| GSMUA_Achr4P26430_001 | Banana | nucleus | 27.1 | 33.6 |
| GSMUA_Achr4P30170_001 | Banana | nucleus | 26.77 | 33.33 |
| GSMUA_Achr11P... | Banana | nucleus | 18.71 | 31.35 |
| GSMUA_Achr6P13140_001 | Banana | nucleus | 24.84 | 31.17 |
| GSMUA_Achr5P12850_001 | Banana | nucleus | 20.32 | 29.86 |
| GSMUA_Achr7P04630_001 | Banana | nucleus | 19.35 | 29.13 |
| GSMUA_Achr4P24970_001 | Banana | nucleus | 21.94 | 28.94 |
| GSMUA_AchrUn_... | Banana | cytosol | 20.97 | 26.97 |
| GSMUA_Achr1P03600_001 | Banana | nucleus | 27.74 | 26.06 |
| GSMUA_Achr4P12210_001 | Banana | nucleus | 18.06 | 25.0 |
| GSMUA_Achr5P20340_001 | Banana | nucleus | 26.45 | 24.33 |
| GSMUA_Achr5P10220_001 | Banana | nucleus | 21.29 | 24.26 |
| GSMUA_Achr9P18780_001 | Banana | nucleus | 21.61 | 23.43 |
| GSMUA_Achr2P00400_001 | Banana | nucleus | 20.65 | 22.22 |
| GSMUA_Achr8P14650_001 | Banana | nucleus | 28.71 | 21.5 |
| GSMUA_Achr2P10230_001 | Banana | nucleus | 20.97 | 21.38 |
| GSMUA_Achr11P... | Banana | nucleus | 22.9 | 21.13 |
| GSMUA_Achr6P18320_001 | Banana | nucleus | 22.58 | 20.59 |
Protein Annotations
| MapMan:15.5.5.3 | MapMan:15.5.7.5 | Gene3D:2.40.330.10 | Gene3D:3.30.730.10 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf |
| InterPro:B3_DNA-bd | InterPro:DNA-bd_dom_sf | InterPro:DNA-bd_pseudobarrel_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr2G22560_001 | EnsemblPlants:GSMUA_Achr2P22560_001 | EnsemblPlants:GSMUA_Achr2T22560_001 | InterPro:IPR001471 | InterPro:IPR003340 |
| InterPro:IPR015300 | InterPro:IPR036955 | UniProt:M0SA97 | PFAM:PF00847 | PFAM:PF02362 | PFscan:PS50863 |
| PFscan:PS51032 | PANTHER:PTHR31140 | PANTHER:PTHR31140:SF21 | SMART:SM00380 | SMART:SM01019 | SUPFAM:SSF101936 |
| SUPFAM:SSF54171 | UniParc:UPI000296D788 | SEG:seg | : | : | : |
Description
AP2/ERF and B3 domain-containing transcription repressor RAV2 [Source:GMGC_GENE;Acc:GSMUA_Achr2G22560_001]
Coordinates
chr2:+:21600879..21604130
Molecular Weight (calculated)
34876.6 Da
IEP (calculated)
10.376
GRAVY (calculated)
-0.543
Length
310 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSSCVEEAS SDSEKRLQAP LHVMEALQRM GSGASVVLDP ILRGGTEAES RKLTSSQYKG VVPQPNGRWG AQIYERHNRV WLGTFGDEAE AARTYDVAAQ
101: RFRGRDAIVD MLRKHTKTPG YSRSAREFLL DKVVTPSDVG KLNRLVIPKH HAEKHFPSKS GSSLACKGVL LNFEDASGRV WRFRYSYWNS SQSYVLTKGW
201: SRYVKEKGLK AGDLVSFWRS TGPEKQLYIN CRTGAVANNP YLPSVIRLFG VNISELPASH GEGKRGKEAT EFFPPPKPLE KPFRYARALL TKSLARKSLF
301: VSIQNWYRTC
101: RFRGRDAIVD MLRKHTKTPG YSRSAREFLL DKVVTPSDVG KLNRLVIPKH HAEKHFPSKS GSSLACKGVL LNFEDASGRV WRFRYSYWNS SQSYVLTKGW
201: SRYVKEKGLK AGDLVSFWRS TGPEKQLYIN CRTGAVANNP YLPSVIRLFG VNISELPASH GEGKRGKEAT EFFPPPKPLE KPFRYARALL TKSLARKSLF
301: VSIQNWYRTC
001: MESSSVDEST TSTGSICETP AITPAKKSSV GNLYRMGSGS SVVLDSENGV EAESRKLPSS KYKGVVPQPN GRWGAQIYEK HQRVWLGTFN EEDEAARAYD
101: VAVHRFRRRD AVTNFKDVKM DEDEVDFLNS HSKSEIVDML RKHTYNEELE QSKRRRNGNG NMTRTLLTSG LSNDGVSTTG FRSAEALFEK AVTPSDVGKL
201: NRLVIPKHHA EKHFPLPSSN VSVKGVLLNF EDVNGKVWRF RYSYWNSSQS YVLTKGWSRF VKEKNLRAGD VVSFSRSNGQ DQQLYIGWKS RSGSDLDAGR
301: VLRLFGVNIS PESSRNDVVG NKRVNDTEML SLVCSKKQRI FHAS
101: VAVHRFRRRD AVTNFKDVKM DEDEVDFLNS HSKSEIVDML RKHTYNEELE QSKRRRNGNG NMTRTLLTSG LSNDGVSTTG FRSAEALFEK AVTPSDVGKL
201: NRLVIPKHHA EKHFPLPSSN VSVKGVLLNF EDVNGKVWRF RYSYWNSSQS YVLTKGWSRF VKEKNLRAGD VVSFSRSNGQ DQQLYIGWKS RSGSDLDAGR
301: VLRLFGVNIS PESSRNDVVG NKRVNDTEML SLVCSKKQRI FHAS
Arabidopsis Description
RAV1AP2/ERF and B3 domain-containing transcription factor RAV1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZWM9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.