Factsheet for Bra011002.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY36099	Canola	nucleus	97.21	99.71
Bra024735.1-P	Field mustard	nucleus	84.96	81.99
AT1G25560.1	Thale cress	nucleus	79.39	78.95
Bra038346.1-P	Field mustard	nucleus, plastid	67.41	69.14
Bra019821.1-P	Field mustard	nucleus	61.28	64.52
Bra026917.1-P	Field mustard	nucleus	61.0	64.41
KRH34761	Soybean	nucleus	60.17	61.54
GSMUA_Achr5P09950_001	Banana	nucleus	55.15	61.49
VIT_01s0011g03070.t01	Wine grape	nucleus	63.79	60.58
Bra026509.1-P	Field mustard	nucleus	54.87	60.43
GSMUA_Achr1P05400_001	Banana	nucleus	48.75	58.72
KRG92025	Soybean	nucleus	58.77	58.29
KRH75484	Soybean	nucleus	61.56	57.55
KRH70603	Soybean	nucleus	62.12	55.61
Solyc05g009790.1.1	Tomato	nucleus	61.0	55.44
PGSC0003DMT400002125	Potato	nucleus	60.72	54.77
GSMUA_Achr3P29380_001	Banana	nucleus	39.55	53.99
GSMUA_Achr6P09880_001	Banana	nucleus	42.9	53.29
TraesCS3D01G260100.1	Wheat	nucleus	55.43	53.21
TraesCS3A01G259900.1	Wheat	nucleus	55.15	52.8
GSMUA_Achr10P...	Banana	nucleus	42.9	52.74
GSMUA_Achr4P03670_001	Banana	nucleus	43.18	52.72
TraesCS3B01G293000.1	Wheat	nucleus	55.99	52.48
GSMUA_Achr2P22560_001	Banana	nucleus	44.85	51.94
HORVU3Hr1G064640.4	Barley	nucleus	54.04	51.05
Zm00001d043782_P001	Maize	nucleus	54.87	50.64
Zm00001d009468_P001	Maize	nucleus, plastid	52.37	50.13
HORVU3Hr1G064590.1	Barley	nucleus	27.02	50.0
GSMUA_Achr4P06710_001	Banana	nucleus	48.75	50.0
GSMUA_AchrUn_...	Banana	nucleus	51.81	49.73
Os05t0549800-01	Rice	nucleus	47.35	49.56
Os01t0693400-01	Rice	nucleus	54.04	49.36
HORVU4Hr1G074300.4	Barley	nucleus	20.61	49.33
TraesCS1B01G392300.1	Wheat	nucleus	52.92	48.59
TraesCS1D01G378900.1	Wheat	nucleus	52.92	48.47
TraesCS1A01G372300.1	Wheat	nucleus	52.92	48.47
HORVU1Hr1G082670.6	Barley	nucleus	52.92	48.35
KXG22484	Sorghum	nucleus, plastid	54.87	48.28
EES03472	Sorghum	nucleus, plastid	55.15	47.94
Zm00001d038907_P001	Maize	nucleus, plastid	53.2	47.04
Zm00001d011639_P001	Maize	nucleus	52.92	46.91
GSMUA_Achr9P21470_001	Banana	nucleus	40.39	46.77
TraesCS1B01G392000.1	Wheat	nucleus	53.2	46.47
TraesCS1A01G372200.1	Wheat	nucleus	52.65	45.76
TraesCS1D01G378400.1	Wheat	nucleus	52.37	45.63
TraesCS1D01G378500.1	Wheat	nucleus	52.37	44.87
TraesCS1D01G378800.1	Wheat	nucleus	51.81	44.82
TraesCS1B01G392200.1	Wheat	nucleus, plastid	51.81	44.71
TraesCS1A01G372100.1	Wheat	nucleus	51.81	42.08
GSMUA_Achr3P21100_001	Banana	nucleus	45.68	39.81
Bra001411.1-P	Field mustard	nucleus	23.4	35.59
Bra017262.1-P	Field mustard	nucleus	23.68	34.69
Bra005301.1-P	Field mustard	nucleus	23.12	33.47
Bra041023.1-P	Field mustard	nucleus	23.96	32.58
Bra034828.1-P	Field mustard	nucleus	23.4	32.56
Bra030458.1-P	Field mustard	nucleus	28.13	31.96
Bra005886.1-P	Field mustard	nucleus	23.12	31.09
Bra014282.1-P	Field mustard	nucleus	28.97	30.68
Bra030476.1-P	Field mustard	nucleus	27.58	30.46
Bra018868.1-P	Field mustard	nucleus	28.41	30.18
Bra018894.1-P	Field mustard	nucleus	28.41	30.18
Bra003482.1-P	Field mustard	nucleus	23.96	30.07
Bra040478.1-P	Field mustard	nucleus	24.51	30.03
Bra007646.1-P	Field mustard	nucleus	23.96	29.45
Bra018854.1-P	Field mustard	nucleus	27.58	29.12
Bra004501.1-P	Field mustard	nucleus	23.96	28.96
Bra018869.1-P	Field mustard	nucleus	26.46	28.44
Bra000434.1-P	Field mustard	nucleus	24.51	28.39
Bra014415.1-P	Field mustard	nucleus	23.96	26.88
Bra033294.1-P	Field mustard	nucleus	24.79	25.87
Bra030497.1-P	Field mustard	nucleus	25.35	25.71
Bra008552.1-P	Field mustard	nucleus	23.4	24.85
Bra037417.1-P	Field mustard	nucleus	20.06	23.23
Bra009171.1-P	Field mustard	nucleus	15.04	22.59

Protein Annotations

MapMan:15.5.5.3	MapMan:15.5.7.5	Gene3D:2.40.330.10	Gene3D:3.30.730.10	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf
InterPro:B3_DNA-bd	EnsemblPlantsGene:Bra011002	EnsemblPlants:Bra011002.1	EnsemblPlants:Bra011002.1-P	InterPro:DNA-bd_dom_sf	InterPro:DNA-bd_pseudobarrel_sf
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471	InterPro:IPR003340
InterPro:IPR015300	InterPro:IPR036955	UniProt:M4D3E8	PFAM:PF00847	PFAM:PF02362	PFscan:PS50863
PFscan:PS51032	PANTHER:PTHR31140	PANTHER:PTHR31140:SF9	SMART:SM00380	SMART:SM01019	SUPFAM:SSF101936
SUPFAM:SSF54171	UniParc:UPI0002545E4B	SEG:seg	:	:	:

Description

AT1G25560 (E=2e-141) TEM1 | TEM1 (TEMPRANILLO 1); transcription factor

Coordinates

chrA08:-:17532161..17533240

Molecular Weight (calculated)

40281.5 Da

IEP (calculated)

9.783

GRAVY (calculated)

-0.621

Length

359 amino acids

Sequence
(BLAST)

001: MDYSCLDDNT SNTSETLSMS KKTPSPPLPL PPAMRLYRMG SGGSSVVLDL ENGVETESSR KLPSSRSKGV VPQPNGRWGA QIYEKHQRVW LGTFNEEEEA
101: AASYDIAARR FRGRDAVTNF KSPASDAESA FLEAHSKAEV VDMLRKHTYA DELRQSERKF LDGDGNGRKR CEFSKTTVTN ENDGVSREVL FEKTVTPSDV
201: GKLNRLVIPK QHAEKHFPLP VTVTPSPTKG VLINLEDRTG KVWRFRYSYW NSSQSYVLTK GWSRFVKEKN LRAGDVVCFE RSSGPDRQLY IDWKVRSGIE
301: KITPVQNVVR LFGVNIFNAT TTNANTNDVV GESGSKKRFR EVDLFALGCS KKQAIINVL

Best Arabidopsis Sequence Match ( AT1G25560.1 )
(BLAST)

001: MEYSCVDDSS TTSESLSIST TPKPTTTTEK KLSSPPATSM RLYRMGSGGS SVVLDSENGV ETESRKLPSS KYKGVVPQPN GRWGAQIYEK HQRVWLGTFN
101: EEEEAASSYD IAVRRFRGRD AVTNFKSQVD GNDAESAFLD AHSKAEIVDM LRKHTYADEF EQSRRKFVNG DGKRSGLETA TYGNDAVLRA REVLFEKTVT
201: PSDVGKLNRL VIPKQHAEKH FPLPAMTTAM GMNPSPTKGV LINLEDRTGK VWRFRYSYWN SSQSYVLTKG WSRFVKEKNL RAGDVVCFER STGPDRQLYI
301: HWKVRSSPVQ TVVRLFGVNI FNVSNEKPND VAVECVGKKR SREDDLFSLG CSKKQAIINI L

Arabidopsis Description

TEM1AP2/ERF and B3 domain-containing transcription repressor TEM1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6M5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.