Factsheet for Os01t0693400-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G260100.1	Wheat	nucleus	79.64	83.69
TraesCS3B01G293000.1	Wheat	nucleus	80.15	82.25
TraesCS3A01G259900.1	Wheat	nucleus	77.35	81.07
Zm00001d043782_P001	Maize	nucleus	78.63	79.43
HORVU3Hr1G064640.4	Barley	nucleus	76.59	79.21
HORVU3Hr1G064590.1	Barley	nucleus	38.17	77.32
EES03472	Sorghum	nucleus, plastid	78.12	74.33
Zm00001d011639_P001	Maize	nucleus	75.32	73.09
Os05t0549800-01	Rice	nucleus	60.81	69.68
CDX97996	Canola	nucleus	48.85	59.08
CDY72302	Canola	nucleus	48.85	58.9
GSMUA_Achr1P21250_001	Banana	nucleus	44.02	58.84
CDY61361	Canola	nucleus	48.6	58.41
CDY58354	Canola	nucleus	48.35	58.28
CDY40973	Canola	nucleus	45.8	57.14
CDX84999	Canola	nucleus	51.15	56.78
Bra026917.1-P	Field mustard	nucleus	49.11	56.76
CDY24391	Canola	nucleus	48.6	56.51
Os01t0140700-00	Rice	nucleus	45.55	56.47
Bra019821.1-P	Field mustard	nucleus	48.85	56.3
CDY16133	Canola	nucleus	51.15	56.15
KRH34761	Soybean	nucleus	50.13	56.13
AT1G13260.1	Thale cress	nucleus	48.85	55.81
CDY36099	Canola	nucleus	49.62	55.71
AT3G25730.1	Thale cress	nucleus	46.82	55.26
KRG92025	Soybean	nucleus	50.64	54.97
Bra026509.1-P	Field mustard	nucleus	45.55	54.91
AT1G68840.1	Thale cress	nucleus	49.11	54.83
CDX81561	Canola	nucleus	47.84	54.81
Bra024735.1-P	Field mustard	nucleus	51.4	54.3
AT1G25560.1	Thale cress	nucleus	49.87	54.29
Bra011002.1-P	Field mustard	nucleus	49.36	54.04
Bra038346.1-P	Field mustard	nucleus, plastid	48.09	54.0
CDY45849	Canola	nucleus, plastid	48.09	54.0
CDX99755	Canola	nucleus	46.31	53.53
KRH75484	Soybean	nucleus	52.16	53.39
VIT_01s0011g03070.t01	Wine grape	nucleus	50.89	52.91
Solyc05g009790.1.1	Tomato	nucleus	51.65	51.39
KRH70603	Soybean	nucleus	52.42	51.37
PGSC0003DMT400002125	Potato	nucleus	51.65	51.01
GSMUA_Achr6P01420_001	Banana	nucleus	40.97	50.95
Os01t0141000-01	Rice	nucleus, plastid	47.07	50.68
CDX83547	Canola	nucleus	41.73	50.62
Os06t0107800-02	Rice	nucleus	20.87	41.21
Os04t0581400-01	Rice	nucleus	24.43	32.76
Os11t0156000-01	Rice	nucleus	22.39	31.54
Os10t0537100-00	Rice	nucleus	24.43	30.77
Os03t0120900-01	Rice	nucleus	24.17	30.55
Os08t0157700-00	Rice	nucleus	21.63	29.62
Os02t0764100-01	Rice	mitochondrion	17.05	26.48
Os02t0683500-01	Rice	nucleus	27.48	26.21
Os02t0455800-01	Rice	nucleus	16.79	24.72
Os02t0455900-00	Rice	nucleus	14.76	21.32
Os12t0157000-01	Rice	cytosol, nucleus	8.91	16.67

Protein Annotations

MapMan:15.5.5.3	MapMan:15.5.7.5	Gene3D:2.40.330.10	Gene3D:3.30.730.10	EntrezGene:4325650	EMBL:AK241984
InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	InterPro:B3_DNA-bd	ProteinID:BAB84620.1	ProteinID:BAF05860.1	ProteinID:BAS73825.1
InterPro:DNA-bd_dom_sf	InterPro:DNA-bd_pseudobarrel_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR001471	InterPro:IPR003340	InterPro:IPR015300	InterPro:IPR036955	EnsemblPlantsGene:Os01g0693400	EnsemblPlants:Os01t0693400-01
PFAM:PF00847	PFAM:PF02362	PFscan:PS50863	PFscan:PS51032	PANTHER:PTHR31140	PANTHER:PTHR31140:SF21
UniProt:Q8RZX9	SMART:SM00380	SMART:SM01019	SUPFAM:SSF101936	SUPFAM:SSF54171	UniParc:UPI00000A8AE1
RefSeq:XP_015622542.1	SEG:seg	:	:	:	:

Description

APETALA2/ETHYLENE-RESPONSIVE ELEMENT BINDING PROTEIN 127Pathogenesis-related transcriptional factor and ERF, DNA-binding domain containing protein. (Os01t0693400-01)

Coordinates

chr1:-:28619585..28621117

Molecular Weight (calculated)

41183.4 Da

IEP (calculated)

9.341

GRAVY (calculated)

-0.290

Length

393 amino acids

Sequence
(BLAST)

001: MDSSSCLVDD TNSGGSSTDK LRALAAAAAE TAPLERMGSG ASAVVDAAEP GAEADSGSGG RVCGGGGGGA GGAGGKLPSS KFKGVVPQPN GRWGAQIYER
101: HQRVWLGTFA GEDDAARAYD VAAQRFRGRD AVTNFRPLAE ADPDAAAELR FLATRSKAEV VDMLRKHTYF DELAQSKRTF AASTPSAATT TASLSNGHLS
201: SPRSPFAPAA ARDHLFDKTV TPSDVGKLNR LVIPKQHAEK HFPLQLPSAG GESKGVLLNF EDAAGKVWRF RYSYWNSSQS YVLTKGWSRF VKEKGLHAGD
301: VVGFYRSAAS AGDDGKLFID CKLVRSTGAA LASPADQPAP SPVKAVRLFG VDLLTAPAPV EQMAGCKRAR DLAATTPPQA AAFKKQCIEL ALV

Best Arabidopsis Sequence Match ( AT1G13260.1 )
(BLAST)

001: MESSSVDEST TSTGSICETP AITPAKKSSV GNLYRMGSGS SVVLDSENGV EAESRKLPSS KYKGVVPQPN GRWGAQIYEK HQRVWLGTFN EEDEAARAYD
101: VAVHRFRRRD AVTNFKDVKM DEDEVDFLNS HSKSEIVDML RKHTYNEELE QSKRRRNGNG NMTRTLLTSG LSNDGVSTTG FRSAEALFEK AVTPSDVGKL
201: NRLVIPKHHA EKHFPLPSSN VSVKGVLLNF EDVNGKVWRF RYSYWNSSQS YVLTKGWSRF VKEKNLRAGD VVSFSRSNGQ DQQLYIGWKS RSGSDLDAGR
301: VLRLFGVNIS PESSRNDVVG NKRVNDTEML SLVCSKKQRI FHAS

Arabidopsis Description

RAV1AP2/ERF and B3 domain-containing transcription factor RAV1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZWM9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.