Factsheet for Os01t0140700-00

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0141000-01	Rice	nucleus, plastid	67.19	58.36
Os05t0549800-01	Rice	nucleus	51.73	47.81
Os01t0693400-01	Rice	nucleus	56.47	45.55
Os06t0107800-02	Rice	nucleus	24.92	39.7
Os04t0581400-01	Rice	nucleus	27.76	30.03
Os08t0157700-00	Rice	nucleus	26.5	29.27
Os11t0156000-01	Rice	nucleus	24.61	27.96
Os02t0764100-01	Rice	mitochondrion	21.77	27.27
Os10t0537100-00	Rice	nucleus	26.18	26.6
Os03t0120900-01	Rice	nucleus	25.55	26.05
Os02t0683500-01	Rice	nucleus	29.97	23.06
Os02t0455800-01	Rice	nucleus	17.67	20.97
Os02t0455900-00	Rice	nucleus	17.35	20.22
Os12t0157000-01	Rice	cytosol, nucleus	7.89	11.9

Protein Annotations

MapMan:15.5.5.3	MapMan:15.5.7.5	Gene3D:2.40.330.10	Gene3D:3.30.730.10	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf
InterPro:B3_DNA-bd	ProteinID:BAB21211.1	ProteinID:BAS70315.1	InterPro:DNA-bd_dom_sf	InterPro:DNA-bd_pseudobarrel_sf	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471	InterPro:IPR003340	InterPro:IPR015300
InterPro:IPR036955	EnsemblPlantsGene:Os01g0140700	EnsemblPlants:Os01t0140700-00	PFAM:PF00847	PFAM:PF02362	PFscan:PS50863
PFscan:PS51032	PANTHER:PTHR31140	PANTHER:PTHR31140:SF9	UniProt:Q9AWS7	SMART:SM00380	SMART:SM01019
SUPFAM:SSF101936	SUPFAM:SSF54171	UniParc:UPI00000A5185	SEG:seg	:	:

Description

APETALA2/ETHYLENE-RESPONSIVE ELEMENT BINDING PROTEIN 77Similar to RAV2 (REGULATOR OF THE ATPASE OF THE VACUOLAR MEMBRANE); DNA binding / transcription factor. (Os01t0140700-00)

Coordinates

chr1:+:2154326..2155279

Molecular Weight (calculated)

35298.3 Da

IEP (calculated)

7.699

GRAVY (calculated)

-0.622

Length

317 amino acids

Sequence
(BLAST)

001: MEQEAAMVVF SCNSGSGGSS STTDSKQEEE EEEELAAMEE DELIHVVQAA ELRLPSSTTA TRPSSRYKGV VPQPNGRWGA QIYERHARVW LGTFPDEEAA
101: ARAYDVAALR FRGRDAVTNR APAAEGASAG ELAFLAAHSK AEVVDMLRKH TYDDELQQGL RRGSRAQPTP RWAREPLFEK AVTPSDVGKL NRLVVPKQQA
201: ERHFPFPLRR HSSDAAGKGV LLNFEDGDGK VWRFRYSYWN SSQSYVLTKG WSRFVREKGL RPGDTVAFSR SAAAWGTEKH LLIDCKKMER NNLATVDDDA
301: RVVVKLFGVD IAGDKTR

Best Arabidopsis Sequence Match ( AT1G68840.2 )
(BLAST)

001: MDSSCIDEIS SSTSESFSAT TAKKLSPPPA AALRLYRMGS GGSSVVLDPE NGLETESRKL PSSKYKGVVP QPNGRWGAQI YEKHQRVWLG TFNEQEEAAR
101: SYDIAACRFR GRDAVVNFKN VLEDGDLAFL EAHSKAEIVD MLRKHTYADE LEQNNKRQLF LSVDANGKRN GSSTTQNDKV LKTREVLFEK AVTPSDVGKL
201: NRLVIPKQHA EKHFPLPSPS PAVTKGVLIN FEDVNGKVWR FRYSYWNSSQ SYVLTKGWSR FVKEKNLRAG DVVTFERSTG LERQLYIDWK VRSGPRENPV
301: QVVVRLFGVD IFNVTTVKPN DVVAVCGGKR SRDVDDMFAL RCSKKQAIIN AL

Arabidopsis Description

RAV2TEM2 [Source:UniProtKB/TrEMBL;Acc:A0A178WNP0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.