Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G117100.1 | Wheat | nucleus | 74.19 | 74.19 |
| TraesCS4A01G198300.2 | Wheat | nucleus | 73.84 | 73.84 |
| TraesCS4D01G114900.1 | Wheat | nucleus | 74.19 | 73.4 |
| KXG27771 | Sorghum | nucleus | 72.04 | 73.36 |
| Os12t0157000-01 | Rice | cytosol, nucleus | 49.1 | 65.24 |
| HORVU4Hr1G021650.22 | Barley | nucleus | 63.8 | 63.8 |
| Zm00001d052591_P001 | Maize | nucleus | 68.82 | 62.54 |
| GSMUA_Achr3P19210_001 | Banana | nucleus | 43.37 | 60.2 |
| GSMUA_Achr9P02600_001 | Banana | nucleus | 40.5 | 58.55 |
| GSMUA_Achr6P35600_001 | Banana | nucleus | 48.39 | 55.79 |
| GSMUA_Achr6P13140_001 | Banana | nucleus | 46.59 | 52.63 |
| GSMUA_Achr9P08980_001 | Banana | nucleus | 28.67 | 49.38 |
| CDY43751 | Canola | nucleus | 42.29 | 48.56 |
| AT2G36080.1 | Thale cress | nucleus | 42.29 | 48.36 |
| Bra017262.1-P | Field mustard | nucleus | 42.29 | 48.16 |
| CDX84162 | Canola | nucleus | 41.94 | 48.15 |
| Bra005301.1-P | Field mustard | nucleus | 42.29 | 47.58 |
| CDX75073 | Canola | nucleus | 42.29 | 47.58 |
| GSMUA_Achr11P... | Banana | nucleus | 29.03 | 43.78 |
| Bra001411.1-P | Field mustard | nucleus | 36.92 | 43.64 |
| CDX73868 | Canola | nucleus | 36.92 | 43.64 |
| CDY08512 | Canola | nucleus | 37.63 | 42.34 |
| CDY01036 | Canola | nucleus | 37.99 | 41.25 |
| CDY62470 | Canola | nucleus | 33.69 | 41.23 |
| Os06t0107800-02 | Rice | nucleus | 29.39 | 41.21 |
| Bra034828.1-P | Field mustard | nucleus | 37.63 | 40.7 |
| Bra041023.1-P | Field mustard | nucleus | 36.92 | 39.02 |
| VIT_08s0007g02810.t01 | Wine grape | nucleus | 39.43 | 38.6 |
| Bra005886.1-P | Field mustard | nucleus | 36.56 | 38.2 |
| CDY47260 | Canola | nucleus | 36.56 | 38.2 |
| AT5G06250.4 | Thale cress | nucleus | 38.35 | 37.68 |
| KRG96220 | Soybean | nucleus | 40.14 | 37.46 |
| KRH67965 | Soybean | nucleus | 38.35 | 37.15 |
| KRH32791 | Soybean | nucleus | 44.8 | 37.09 |
| KRH72242 | Soybean | nucleus | 43.73 | 35.47 |
| PGSC0003DMT400072354 | Potato | nucleus | 36.56 | 35.42 |
| Solyc10g083210.1.1 | Tomato | nucleus | 37.63 | 34.09 |
| CDX80996 | Canola | nucleus | 33.33 | 33.82 |
| Os03t0120900-01 | Rice | nucleus | 36.56 | 32.8 |
| Os10t0537100-00 | Rice | nucleus | 36.56 | 32.69 |
| Solyc09g010230.1.1 | Tomato | nucleus | 39.43 | 31.88 |
| PGSC0003DMT400023077 | Potato | nucleus | 37.99 | 31.64 |
| Os04t0581400-01 | Rice | nucleus | 31.54 | 30.03 |
| AT3G11580.3 | Thale cress | cytosol, endoplasmic reticulum, nucleus | 39.07 | 29.38 |
| CDY70080 | Canola | nucleus | 24.01 | 28.03 |
| Bra009171.1-P | Field mustard | nucleus | 24.01 | 28.03 |
| CDX98911 | Canola | nucleus | 24.01 | 28.03 |
| GSMUA_Achr6P18320_001 | Banana | nucleus | 34.05 | 27.94 |
| Os08t0157700-00 | Rice | nucleus | 28.67 | 27.87 |
| Os05t0549800-01 | Rice | nucleus | 32.97 | 26.82 |
| Os02t0683500-01 | Rice | nucleus | 36.56 | 24.76 |
| Os01t0140700-00 | Rice | nucleus | 27.96 | 24.61 |
| Os02t0455800-01 | Rice | nucleus | 23.3 | 24.34 |
| Os02t0764100-01 | Rice | mitochondrion | 21.86 | 24.11 |
| Os01t0141000-01 | Rice | nucleus, plastid | 30.11 | 23.01 |
| Os01t0693400-01 | Rice | nucleus | 31.54 | 22.39 |
| Os02t0455900-00 | Rice | nucleus | 20.43 | 20.96 |
Protein Annotations
| MapMan:15.5.5.3 | Gene3D:2.40.330.10 | EntrezGene:4349821 | ProteinID:AAX92717.1 | ProteinID:AAX92718.1 | ProteinID:AAX92951.1 |
| ProteinID:ABA91538.2 | EMBL:AK070487 | InterPro:B3_DNA-bd | ProteinID:BAF27637.1 | ProteinID:BAT12756.1 | InterPro:DNA-bd_pseudobarrel_sf |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR003340 | InterPro:IPR015300 | EnsemblPlantsGene:Os11g0156000 |
| EnsemblPlants:Os11t0156000-01 | PFAM:PF02362 | PFscan:PS50863 | PANTHER:PTHR31140 | PANTHER:PTHR31140:SF19 | UniProt:Q53QI0 |
| SMART:SM01019 | SUPFAM:SSF101936 | UniParc:UPI0000508928 | RefSeq:XP_015615108.1 | SEG:seg | : |
Description
Similar to AP2 domain containing protein RAP2.8 (Fragment). (Os11t0156000-01);Similar to B3 DNA binding domain containing protein. (Os11t0156000-02)
Coordinates
chr11:-:2631709..2633563
Molecular Weight (calculated)
30970.8 Da
IEP (calculated)
7.195
GRAVY (calculated)
-0.682
Length
279 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMNHPLFSQ EQPQSWPWGV AMYANFHYHH HYEKEHMFEK PLTPSDVGKL NRLVIPKQHA ERYFPLGAGD AADKGLILSF EDEAGAPWRF RYSYWTSSQS
101: YVLTKGWSRY VKEKRLDAGD VVHFERVRGS FGVGDRLFIG CRRRGDAAAA QTPAPPPAVR VAPAAQNAGE QQPWSPMCYS TSGGGSYPTS PANSYAYRRA
201: ADHDHGDMHH ADESPRDTDS PSFSAGSAPS RRLRLFGVNL DCGPEPEADT TAAATMYGYM HQQSSYAAMS AVPSYWGNS
101: YVLTKGWSRY VKEKRLDAGD VVHFERVRGS FGVGDRLFIG CRRRGDAAAA QTPAPPPAVR VAPAAQNAGE QQPWSPMCYS TSGGGSYPTS PANSYAYRRA
201: ADHDHGDMHH ADESPRDTDS PSFSAGSAPS RRLRLFGVNL DCGPEPEADT TAAATMYGYM HQQSSYAAMS AVPSYWGNS
001: MSVNHYSTDH HHTLLWQQQQ HRHTTDTSET TTTATWLHDD LKESLFEKSL TPSDVGKLNR LVIPKQHAEK YFPLNAVLVS SAAADTSSSE KGMLLSFEDE
101: SGKSWRFRYS YWNSSQSYVL TKGWSRFVKD KQLDPGDVVF FQRHRSDSRR LFIGWRRRGQ GSSSSVAATN SAVNTSSMGA LSYHQIHATS NYSNPPSHSE
201: YSHYGAAVAT AAETHSTPSS SVVGSSRTVR LFGVNLECQM DENDGDDSVA VATTVESPDG YYGQNII
101: SGKSWRFRYS YWNSSQSYVL TKGWSRFVKD KQLDPGDVVF FQRHRSDSRR LFIGWRRRGQ GSSSSVAATN SAVNTSSMGA LSYHQIHATS NYSNPPSHSE
201: YSHYGAAVAT AAETHSTPSS SVVGSSRTVR LFGVNLECQM DENDGDDSVA VATTVESPDG YYGQNII
Arabidopsis Description
AP2/B3-like transcriptional factor family protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8BF34]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.