Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr9P08980_001 | Banana | nucleus | 40.0 | 45.68 |
| GSMUA_Achr3P19210_001 | Banana | nucleus | 42.7 | 39.3 |
| GSMUA_Achr6P13140_001 | Banana | nucleus | 48.65 | 36.44 |
| GSMUA_Achr9P02600_001 | Banana | nucleus | 37.84 | 36.27 |
| GSMUA_Achr6P35600_001 | Banana | nucleus | 43.24 | 33.06 |
| TraesCS5B01G126200.1 | Wheat | nucleus | 43.78 | 30.57 |
| TraesCS5D01G134700.1 | Wheat | nucleus | 43.78 | 30.45 |
| GSMUA_Achr5P12850_001 | Banana | nucleus | 34.59 | 30.33 |
| GSMUA_Achr7P04630_001 | Banana | nucleus | 33.51 | 30.1 |
| TraesCS2A01G460700.1 | Wheat | nucleus | 42.7 | 29.7 |
| TraesCS5A01G127100.1 | Wheat | nucleus | 42.7 | 29.7 |
| TraesCS2B01G482400.1 | Wheat | nucleus | 42.7 | 29.59 |
| CDX84162 | Canola | nucleus | 38.38 | 29.22 |
| CDY43751 | Canola | nucleus | 38.38 | 29.22 |
| Os11t0156000-01 | Rice | nucleus | 43.78 | 29.03 |
| CDY08512 | Canola | nucleus | 38.92 | 29.03 |
| Bra017262.1-P | Field mustard | nucleus | 38.38 | 28.98 |
| TraesCS2D01G460900.1 | Wheat | nucleus | 41.62 | 28.84 |
| CDX73868 | Canola | nucleus | 36.76 | 28.81 |
| Bra001411.1-P | Field mustard | nucleus | 36.76 | 28.81 |
| CDX75073 | Canola | nucleus | 38.38 | 28.63 |
| Bra005301.1-P | Field mustard | nucleus | 38.38 | 28.63 |
| AT2G36080.1 | Thale cress | nucleus | 37.3 | 28.28 |
| CDY62470 | Canola | nucleus | 34.59 | 28.07 |
| TraesCS4B01G117100.1 | Wheat | nucleus | 42.16 | 27.96 |
| TraesCS4A01G198300.2 | Wheat | nucleus | 42.16 | 27.96 |
| Zm00001d023446_P001 | Maize | nucleus | 42.7 | 27.92 |
| Bra034828.1-P | Field mustard | nucleus | 38.92 | 27.91 |
| KXG27771 | Sorghum | nucleus | 41.08 | 27.74 |
| GSMUA_Achr4P12210_001 | Banana | nucleus | 33.51 | 27.68 |
| CDY01036 | Canola | nucleus | 38.38 | 27.63 |
| TraesCS4D01G114900.1 | Wheat | nucleus | 41.62 | 27.3 |
| GSMUA_Achr4P24970_001 | Banana | nucleus | 34.59 | 27.23 |
| GSMUA_AchrUn_... | Banana | cytosol | 35.14 | 26.97 |
| Bra041023.1-P | Field mustard | nucleus | 37.84 | 26.52 |
| HORVU5Hr1G040620.4 | Barley | nucleus | 38.92 | 26.28 |
| CDY47260 | Canola | nucleus | 37.84 | 26.22 |
| Bra005886.1-P | Field mustard | nucleus | 37.84 | 26.22 |
| HORVU4Hr1G021650.22 | Barley | nucleus | 39.46 | 26.16 |
| GSMUA_Achr5P10220_001 | Banana | nucleus | 37.3 | 25.37 |
| KXG22988 | Sorghum | plastid | 43.78 | 25.31 |
| GSMUA_Achr4P30170_001 | Banana | nucleus | 34.05 | 25.3 |
| Zm00001d052591_P001 | Maize | nucleus | 41.62 | 25.08 |
| AT5G06250.4 | Thale cress | nucleus | 38.38 | 25.0 |
| PGSC0003DMT400072354 | Potato | nucleus | 38.92 | 25.0 |
| Solyc10g083210.1.1 | Tomato | nucleus | 41.08 | 24.68 |
| GSMUA_Achr4P26430_001 | Banana | nucleus | 32.97 | 24.4 |
| VIT_08s0007g02810.t01 | Wine grape | nucleus | 36.76 | 23.86 |
| CDX80996 | Canola | nucleus | 35.14 | 23.64 |
| KRH67965 | Soybean | nucleus | 36.22 | 23.26 |
| GSMUA_Achr9P18780_001 | Banana | nucleus | 35.68 | 23.08 |
| KRG96220 | Soybean | nucleus | 37.3 | 23.08 |
| GSMUA_Achr6P18320_001 | Banana | nucleus | 42.16 | 22.94 |
| Os12t0157000-01 | Rice | cytosol, nucleus | 25.95 | 22.86 |
| GSMUA_Achr2P00400_001 | Banana | nucleus | 33.51 | 21.53 |
| Solyc09g010230.1.1 | Tomato | nucleus | 40.0 | 21.45 |
| KRH32791 | Soybean | nucleus | 38.92 | 21.36 |
| PGSC0003DMT400023077 | Potato | nucleus | 38.38 | 21.19 |
| GSMUA_Achr2P10230_001 | Banana | nucleus | 34.59 | 21.05 |
| GSMUA_Achr1P03600_001 | Banana | nucleus | 37.3 | 20.91 |
| KRH72242 | Soybean | nucleus | 38.38 | 20.64 |
| GSMUA_Achr6P09880_001 | Banana | nucleus | 31.89 | 20.42 |
| GSMUA_Achr6P01420_001 | Banana | nucleus | 34.59 | 20.25 |
| AT3G11580.3 | Thale cress | cytosol, endoplasmic reticulum, nucleus | 40.0 | 19.95 |
| GSMUA_Achr1P05400_001 | Banana | nucleus | 31.89 | 19.8 |
| GSMUA_Achr3P29380_001 | Banana | nucleus | 27.57 | 19.39 |
| GSMUA_Achr5P09950_001 | Banana | nucleus | 33.51 | 19.25 |
| GSMUA_Achr1P21250_001 | Banana | nucleus | 30.27 | 19.05 |
| GSMUA_Achr2P22560_001 | Banana | nucleus | 31.35 | 18.71 |
| GSMUA_Achr5P20340_001 | Banana | nucleus | 32.97 | 18.1 |
| Bra009171.1-P | Field mustard | nucleus | 22.16 | 17.15 |
| CDX98911 | Canola | nucleus | 22.16 | 17.15 |
| CDY70080 | Canola | nucleus | 22.16 | 17.15 |
| GSMUA_Achr11P... | Banana | nucleus | 28.65 | 15.77 |
| GSMUA_AchrUn_... | Banana | nucleus | 31.35 | 15.51 |
| GSMUA_Achr4P06710_001 | Banana | nucleus | 28.11 | 14.86 |
| GSMUA_Achr8P14650_001 | Banana | nucleus | 30.81 | 13.77 |
| GSMUA_Achr3P21100_001 | Banana | nucleus | 30.27 | 13.59 |
| GSMUA_Achr4P03670_001 | Banana | nucleus | 21.08 | 13.27 |
| GSMUA_Achr9P21470_001 | Banana | nucleus | 22.16 | 13.23 |
| GSMUA_Achr10P... | Banana | nucleus | 18.38 | 11.64 |
Protein Annotations
| Gene3D:2.40.330.10 | MapMan:35.1 | InterPro:B3_DNA-bd | InterPro:DNA-bd_pseudobarrel_sf | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr11G12530_001 | EnsemblPlants:GSMUA_Achr11P12530_001 | EnsemblPlants:GSMUA_Achr11T12530_001 | InterPro:IPR003340 | InterPro:IPR015300 |
| UniProt:M0RRN3 | PFAM:PF02362 | PFscan:PS50863 | PANTHER:PTHR31140 | PANTHER:PTHR31140:SF2 | SMART:SM01019 |
| SUPFAM:SSF101936 | UniParc:UPI000295199A | SEG:seg | : | : | : |
Description
Putative hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr11G12530_001]
Coordinates
chr11:-:11546944..11547606
Molecular Weight (calculated)
21168.9 Da
IEP (calculated)
10.312
GRAVY (calculated)
-1.049
Length
185 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPVSDHHHE AWSWEPPVNL HQHYRHHPYR GEQIEPRRQR EHMFEKSLTP SDVGKLNRLV IPKQQAENQS YVLTKGWSRF VKEKKLDAGD VVLFERLRAG
101: GDRLYIGCRR QGREESPPAP GAPPARPSRN HSCLGTFLRP GNRTKSLQFS TSRSCSGDRE EEAAKNTAEA PANSKRLRLF GVNLN
101: GDRLYIGCRR QGREESPPAP GAPPARPSRN HSCLGTFLRP GNRTKSLQFS TSRSCSGDRE EEAAKNTAEA PANSKRLRLF GVNLN
001: MSVNHYSTDH HHTLLWQQQQ HRHTTDTSET TTTATWLHDD LKESLFEKSL TPSDVGKLNR LVIPKQHAEK YFPLNAVLVS SAAADTSSSE KGMLLSFEDE
101: SGKSWRFRYS YWNSSQSYVL TKGWSRFVKD KQLDPGDVVF FQRHRSDSRR LFIGWRRRGQ GSSSSVAATN SAVNTSSMGA LSYHQIHATS NYSNPPSHSE
201: YSHYGAAVAT AAETHSTPSS SVVGSSRTVR LFGVNLECQM DENDGDDSVA VATTVESPDG YYGQNII
101: SGKSWRFRYS YWNSSQSYVL TKGWSRFVKD KQLDPGDVVF FQRHRSDSRR LFIGWRRRGQ GSSSSVAATN SAVNTSSMGA LSYHQIHATS NYSNPPSHSE
201: YSHYGAAVAT AAETHSTPSS SVVGSSRTVR LFGVNLECQM DENDGDDSVA VATTVESPDG YYGQNII
Arabidopsis Description
AP2/B3-like transcriptional factor family protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8BF34]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.