Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG22988 | Sorghum | plastid | 79.86 | 70.62 |
| Os12t0157000-01 | Rice | cytosol, nucleus | 45.58 | 61.43 |
| GSMUA_Achr3P19210_001 | Banana | nucleus | 42.76 | 60.2 |
| Zm00001d052591_P001 | Maize | nucleus | 63.96 | 58.96 |
| GSMUA_Achr9P02600_001 | Banana | nucleus | 38.87 | 56.99 |
| Zm00001d035982_P001 | Maize | nucleus | 17.31 | 55.68 |
| GSMUA_Achr6P13140_001 | Banana | nucleus | 46.64 | 53.44 |
| GSMUA_Achr6P35600_001 | Banana | nucleus | 44.88 | 52.48 |
| GSMUA_Achr9P08980_001 | Banana | nucleus | 27.21 | 47.53 |
| CDY43751 | Canola | nucleus | 38.52 | 44.86 |
| AT2G36080.1 | Thale cress | nucleus | 38.52 | 44.67 |
| Bra017262.1-P | Field mustard | nucleus | 38.52 | 44.49 |
| CDX84162 | Canola | nucleus | 38.16 | 44.44 |
| CDX75073 | Canola | nucleus | 38.52 | 43.95 |
| Bra005301.1-P | Field mustard | nucleus | 38.52 | 43.95 |
| GSMUA_Achr11P... | Banana | nucleus | 27.92 | 42.7 |
| CDY08512 | Canola | nucleus | 37.1 | 42.34 |
| CDY01036 | Canola | nucleus | 38.16 | 42.02 |
| CDX73868 | Canola | nucleus | 34.98 | 41.95 |
| Bra001411.1-P | Field mustard | nucleus | 34.98 | 41.95 |
| CDY62470 | Canola | nucleus | 33.57 | 41.67 |
| Bra034828.1-P | Field mustard | nucleus | 37.46 | 41.09 |
| Bra041023.1-P | Field mustard | nucleus | 37.81 | 40.53 |
| VIT_08s0007g02810.t01 | Wine grape | nucleus | 39.93 | 39.65 |
| CDY47260 | Canola | nucleus | 37.1 | 39.33 |
| Bra005886.1-P | Field mustard | nucleus | 37.1 | 39.33 |
| Zm00001d035903_P001 | Maize | nucleus | 30.39 | 38.39 |
| AT5G06250.4 | Thale cress | nucleus | 38.16 | 38.03 |
| Zm00001d024103_P001 | Maize | nucleus | 29.68 | 37.5 |
| KRH67965 | Soybean | nucleus | 38.16 | 37.5 |
| Zm00001d010077_P001 | Maize | nucleus | 34.28 | 37.45 |
| Zm00001d048815_P001 | Maize | nucleus | 30.39 | 37.07 |
| KRG96220 | Soybean | nucleus | 38.16 | 36.12 |
| Zm00001d029749_P001 | Maize | nucleus | 34.28 | 35.53 |
| PGSC0003DMT400072354 | Potato | nucleus | 35.69 | 35.07 |
| KRH32791 | Soybean | nucleus | 41.7 | 35.01 |
| CDX80996 | Canola | nucleus | 33.92 | 34.91 |
| Zm00001d047359_P001 | Maize | nucleus | 33.92 | 34.66 |
| KRH72242 | Soybean | nucleus | 41.7 | 34.3 |
| Solyc10g083210.1.1 | Tomato | nucleus | 36.4 | 33.44 |
| PGSC0003DMT400023077 | Potato | nucleus | 39.22 | 33.13 |
| Solyc09g010230.1.1 | Tomato | nucleus | 40.28 | 33.04 |
| Zm00001d027409_P001 | Maize | nucleus | 37.46 | 32.42 |
| Zm00001d024545_P001 | Maize | nucleus | 27.56 | 31.33 |
| Bra009171.1-P | Field mustard | nucleus | 25.44 | 30.13 |
| CDX98911 | Canola | nucleus | 25.44 | 30.13 |
| CDY70080 | Canola | nucleus | 25.44 | 30.13 |
| AT3G11580.3 | Thale cress | cytosol, endoplasmic reticulum, nucleus | 38.52 | 29.38 |
| GSMUA_Achr6P18320_001 | Banana | nucleus | 32.16 | 26.76 |
| Zm00001d024354_P001 | Maize | nucleus, plastid | 25.44 | 25.26 |
| Zm00001d043782_P001 | Maize | nucleus | 34.63 | 25.19 |
| Zm00001d026005_P001 | Maize | nucleus | 35.69 | 25.0 |
| Zm00001d002562_P001 | Maize | nucleus | 35.69 | 24.69 |
| Zm00001d009468_P001 | Maize | nucleus, plastid | 31.8 | 24.0 |
| Zm00001d011639_P001 | Maize | nucleus | 33.92 | 23.7 |
| Zm00001d038907_P001 | Maize | nucleus, plastid | 33.92 | 23.65 |
| Zm00001d051471_P001 | Maize | nucleus | 34.28 | 23.1 |
| Zm00001d017618_P001 | Maize | nucleus | 33.92 | 22.75 |
| Zm00001d039907_P001 | Maize | nucleus | 29.33 | 21.96 |
Protein Annotations
| EntrezGene:100501773 | MapMan:15.5.5.3 | Gene3D:2.40.330.10 | ProteinID:AQK39327.1 | InterPro:B3_DNA-bd | EMBL:BT086190 |
| UniProt:C4J5U3 | InterPro:DNA-bd_pseudobarrel_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR003340 |
| InterPro:IPR015300 | PFAM:PF02362 | PFscan:PS50863 | PANTHER:PTHR31140 | PANTHER:PTHR31140:SF19 | SMART:SM01019 |
| SUPFAM:SSF101936 | UniParc:UPI0001A4C25B | EnsemblPlantsGene:Zm00001d023446 | EnsemblPlants:Zm00001d023446_P001 | EnsemblPlants:Zm00001d023446_T001 | SEG:seg |
Description
ABI3-VP1-transcription factor 41B3 domain-containing protein
Coordinates
chr10:+:5747841..5749899
Molecular Weight (calculated)
31026.0 Da
IEP (calculated)
8.027
GRAVY (calculated)
-0.670
Length
283 amino acids
Sequence
(BLAST)
(BLAST)
001: MATHHLAQGH PQAWPWGMAM YTNLHYHHHQ QQQYYEREHL FEKPLTPSDV GKLNRLVIPK QHAERHFPLG GGDGNGNEKG LLLEFDDEAG RPWRFRYSYW
101: VSSQSYVLTK GWSRYVKEKR LDAGDVVRFD RVRGAGVGAA DRLFICCRRR GESAAAASAA ATPTPPPVAP ALNAGEQQQQ QPWSPTVCYS TSGSSYPPSP
201: ASPYAYHIDT PHAGAGEADA KSSGGTPTTG TAPTRKLRLF GVNLDCGPEP ETETPTAPMY GYGYVHQSPY AAVPAVPSYW GSS
101: VSSQSYVLTK GWSRYVKEKR LDAGDVVRFD RVRGAGVGAA DRLFICCRRR GESAAAASAA ATPTPPPVAP ALNAGEQQQQ QPWSPTVCYS TSGSSYPPSP
201: ASPYAYHIDT PHAGAGEADA KSSGGTPTTG TAPTRKLRLF GVNLDCGPEP ETETPTAPMY GYGYVHQSPY AAVPAVPSYW GSS
001: MSINQYSSDF HYHSLMWQQQ QQQQQHQNDV VEEKEALFEK PLTPSDVGKL NRLVIPKQHA ERYFPLAAAA ADAVEKGLLL CFEDEEGKPW RFRYSYWNSS
101: QSYVLTKGWS RYVKEKHLDA GDVVLFHRHR SDGGRFFIGW RRRGDSSSSS DSYRHVQSNA SLQYYPHAGA QAVESQRGNS KTLRLFGVNM ECQLDSDWSE
201: PSTPDGSNTY TTNHDQFHFY PQQQHYPPPY YMDISFTGDM NRTS
101: QSYVLTKGWS RYVKEKHLDA GDVVLFHRHR SDGGRFFIGW RRRGDSSSSS DSYRHVQSNA SLQYYPHAGA QAVESQRGNS KTLRLFGVNM ECQLDSDWSE
201: PSTPDGSNTY TTNHDQFHFY PQQQHYPPPY YMDISFTGDM NRTS
Arabidopsis Description
ARF31B3 domain-containing protein At2g36080 [Source:UniProtKB/Swiss-Prot;Acc:Q8GYJ2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.