Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d043782_P001 | Maize | nucleus | 82.47 | 85.86 |
| EES03472 | Sorghum | nucleus, plastid | 84.94 | 83.29 |
| TraesCS3D01G260100.1 | Wheat | nucleus | 72.84 | 78.88 |
| TraesCS3A01G259900.1 | Wheat | nucleus | 72.35 | 78.13 |
| TraesCS3B01G293000.1 | Wheat | nucleus | 73.58 | 77.81 |
| HORVU3Hr1G064640.4 | Barley | nucleus | 71.85 | 76.58 |
| Os01t0693400-01 | Rice | nucleus | 73.09 | 75.32 |
| HORVU3Hr1G064590.1 | Barley | nucleus | 34.81 | 72.68 |
| Zm00001d009468_P001 | Maize | nucleus, plastid | 63.95 | 69.07 |
| Zm00001d038907_P001 | Maize | nucleus, plastid | 66.67 | 66.5 |
| Zm00001d035982_P001 | Maize | nucleus | 13.83 | 63.64 |
| GSMUA_Achr1P21250_001 | Banana | nucleus | 44.2 | 60.88 |
| CDX97996 | Canola | nucleus | 45.68 | 56.92 |
| CDY61361 | Canola | nucleus | 45.68 | 56.57 |
| CDY72302 | Canola | nucleus | 45.19 | 56.13 |
| CDY58354 | Canola | nucleus | 45.19 | 56.13 |
| CDX84999 | Canola | nucleus | 48.4 | 55.37 |
| CDY40973 | Canola | nucleus | 42.72 | 54.92 |
| CDY16133 | Canola | nucleus | 48.4 | 54.75 |
| CDY24391 | Canola | nucleus | 45.68 | 54.73 |
| KRH34761 | Soybean | nucleus | 47.41 | 54.7 |
| CDY36099 | Canola | nucleus | 46.91 | 54.29 |
| Bra019821.1-P | Field mustard | nucleus | 45.68 | 54.25 |
| Bra026917.1-P | Field mustard | nucleus | 45.43 | 54.12 |
| AT1G13260.1 | Thale cress | nucleus | 45.68 | 53.78 |
| AT1G68840.1 | Thale cress | nucleus | 46.42 | 53.41 |
| KRG92025 | Soybean | nucleus | 47.65 | 53.31 |
| AT3G25730.1 | Thale cress | nucleus | 43.7 | 53.15 |
| Bra011002.1-P | Field mustard | nucleus | 46.91 | 52.92 |
| CDX81561 | Canola | nucleus | 44.44 | 52.48 |
| Bra026509.1-P | Field mustard | nucleus | 42.22 | 52.45 |
| Bra024735.1-P | Field mustard | nucleus | 48.15 | 52.42 |
| AT1G25560.1 | Thale cress | nucleus | 46.67 | 52.35 |
| CDY45849 | Canola | nucleus, plastid | 44.69 | 51.71 |
| Bra038346.1-P | Field mustard | nucleus, plastid | 44.69 | 51.71 |
| KRH75484 | Soybean | nucleus | 48.89 | 51.56 |
| CDX99755 | Canola | nucleus | 42.96 | 51.18 |
| VIT_01s0011g03070.t01 | Wine grape | nucleus | 47.41 | 50.79 |
| GSMUA_Achr6P01420_001 | Banana | nucleus | 39.51 | 50.63 |
| CDX83547 | Canola | nucleus | 40.25 | 50.31 |
| KRH70603 | Soybean | nucleus | 49.38 | 49.88 |
| PGSC0003DMT400002125 | Potato | nucleus | 48.4 | 49.25 |
| Solyc05g009790.1.1 | Tomato | nucleus | 47.65 | 48.86 |
| Zm00001d039907_P001 | Maize | nucleus | 45.43 | 48.68 |
| Zm00001d048815_P001 | Maize | nucleus | 22.22 | 38.79 |
| Zm00001d035903_P001 | Maize | nucleus | 21.23 | 38.39 |
| Zm00001d024103_P001 | Maize | nucleus | 20.74 | 37.5 |
| Zm00001d010077_P001 | Maize | nucleus | 23.21 | 36.29 |
| Zm00001d029749_P001 | Maize | nucleus | 22.96 | 34.07 |
| Zm00001d047359_P001 | Maize | nucleus | 23.21 | 33.94 |
| Zm00001d023446_P001 | Maize | nucleus | 23.7 | 33.92 |
| Zm00001d024545_P001 | Maize | nucleus | 20.25 | 32.93 |
| Zm00001d027409_P001 | Maize | nucleus | 25.68 | 31.8 |
| Zm00001d052591_P001 | Maize | nucleus | 21.98 | 28.99 |
| Zm00001d024354_P001 | Maize | nucleus, plastid | 20.25 | 28.77 |
| Zm00001d002562_P001 | Maize | nucleus | 28.15 | 27.87 |
| Zm00001d017618_P001 | Maize | nucleus | 28.4 | 27.25 |
| Zm00001d026005_P001 | Maize | nucleus | 27.16 | 27.23 |
| Zm00001d051471_P001 | Maize | nucleus | 26.67 | 25.71 |
Protein Annotations
| MapMan:15.5.5.3 | MapMan:15.5.7.5 | Gene3D:2.40.330.10 | Gene3D:3.30.730.10 | UniProt:A0A1D6G2Q7 | InterPro:AP2/ERF_dom |
| InterPro:AP2/ERF_dom_sf | ProteinID:AQK97649.1 | InterPro:B3_DNA-bd | InterPro:DNA-bd_dom_sf | InterPro:DNA-bd_pseudobarrel_sf | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001471 | InterPro:IPR003340 | InterPro:IPR015300 |
| InterPro:IPR036955 | PFAM:PF00847 | PFAM:PF02362 | PFscan:PS50863 | PFscan:PS51032 | PANTHER:PTHR31140 |
| PANTHER:PTHR31140:SF21 | SMART:SM00380 | SMART:SM01019 | SUPFAM:SSF101936 | SUPFAM:SSF54171 | UniParc:UPI0001E235BD |
| EnsemblPlantsGene:Zm00001d011639 | EnsemblPlants:Zm00001d011639_P001 | EnsemblPlants:Zm00001d011639_T001 | SEG:seg | : | : |
Description
ABI3-VP1-transcription factor 33AP2/ERF and B3 domain-containing transcription repressor TEM1
Coordinates
chr8:-:157135997..157137214
Molecular Weight (calculated)
41970.2 Da
IEP (calculated)
9.619
GRAVY (calculated)
-0.203
Length
405 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSASSLVDD TSGSGGGACT DKLRALAAAA ASASGPPPER MGSGASAVVD AAEPGAEADS GSAPASVAAV AAGVGGKLPS SRYKGVVPQP NGRWGAQIYE
101: RHLRVWLGTF AGEADAARAY DVAAQRFRGR DAATNFRPLA DAGPDAAAEL RFLASRSKAE VVDMLRKHTY FDELAQNKRA FAAAAAAASS AAATTSTSLG
201: NDNRSSSPAC AREHLFDKAV TPSDVGKLNR LVIPKQHAER HFPLHLAAAA GGGESTGVLL NLEDAAGKVW RFRYSYWNSS QSYVLTKGWS RFVKEKGLQA
301: GDVVGFYRSA AGADSKLFID CKLRPNSVDT ASTTSPVGSS PPPAPVAKAV RLFGVDLLTA PADAMARCKR ARDLASPPQA AIKKQLVELA LASVDQCYGA
401: GRSFS
101: RHLRVWLGTF AGEADAARAY DVAAQRFRGR DAATNFRPLA DAGPDAAAEL RFLASRSKAE VVDMLRKHTY FDELAQNKRA FAAAAAAASS AAATTSTSLG
201: NDNRSSSPAC AREHLFDKAV TPSDVGKLNR LVIPKQHAER HFPLHLAAAA GGGESTGVLL NLEDAAGKVW RFRYSYWNSS QSYVLTKGWS RFVKEKGLQA
301: GDVVGFYRSA AGADSKLFID CKLRPNSVDT ASTTSPVGSS PPPAPVAKAV RLFGVDLLTA PADAMARCKR ARDLASPPQA AIKKQLVELA LASVDQCYGA
401: GRSFS
001: MDSSCIDEIS SSTSESFSAT TAKKLSPPPA AALRLYRMGS GGSSVVLDPE NGLETESRKL PSSKYKGVVP QPNGRWGAQI YEKHQRVWLG TFNEQEEAAR
101: SYDIAACRFR GRDAVVNFKN VLEDGDLAFL EAHSKAEIVD MLRKHTYADE LEQNNKRQLF LSVDANGKRN GSSTTQNDKV LKTREVLFEK AVTPSDVGKL
201: NRLVIPKQHA EKHFPLPSPS PAVTKGVLIN FEDVNGKVWR FRYSYWNSSQ SYVLTKGWSR FVKEKNLRAG DVVTFERSTG LERQLYIDWK VRSGPRENPV
301: QVVVRLFGVD IFNVTTVKPN DVVAVCGGKR SRDVDDMFAL RCSKKQAIIN AL
101: SYDIAACRFR GRDAVVNFKN VLEDGDLAFL EAHSKAEIVD MLRKHTYADE LEQNNKRQLF LSVDANGKRN GSSTTQNDKV LKTREVLFEK AVTPSDVGKL
201: NRLVIPKQHA EKHFPLPSPS PAVTKGVLIN FEDVNGKVWR FRYSYWNSSQ SYVLTKGWSR FVKEKNLRAG DVVTFERSTG LERQLYIDWK VRSGPRENPV
301: QVVVRLFGVD IFNVTTVKPN DVVAVCGGKR SRDVDDMFAL RCSKKQAIIN AL
Arabidopsis Description
RAV2TEM2 [Source:UniProtKB/TrEMBL;Acc:A0A178WNP0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.