Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH34761 | Soybean | nucleus | 86.74 | 89.46 |
| KRH75484 | Soybean | nucleus | 72.1 | 67.97 |
| KRH70603 | Soybean | nucleus | 74.31 | 67.08 |
| VIT_01s0011g03070.t01 | Wine grape | nucleus | 65.47 | 62.7 |
| CDY72302 | Canola | nucleus | 55.52 | 61.66 |
| CDX97996 | Canola | nucleus | 55.25 | 61.54 |
| CDY58354 | Canola | nucleus | 55.25 | 61.35 |
| CDY61361 | Canola | nucleus | 55.25 | 61.16 |
| AT1G68840.1 | Thale cress | nucleus | 59.39 | 61.08 |
| CDY24391 | Canola | nucleus | 56.63 | 60.65 |
| CDX84999 | Canola | nucleus | 59.12 | 60.45 |
| CDY40973 | Canola | nucleus | 52.49 | 60.32 |
| CDY36099 | Canola | nucleus | 58.29 | 60.29 |
| Bra026917.1-P | Field mustard | nucleus | 56.08 | 59.71 |
| CDY16133 | Canola | nucleus | 58.84 | 59.5 |
| CDX81561 | Canola | nucleus | 56.08 | 59.18 |
| GSMUA_Achr5P09950_001 | Banana | nucleus | 52.49 | 59.01 |
| Bra019821.1-P | Field mustard | nucleus | 55.52 | 58.94 |
| Bra011002.1-P | Field mustard | nucleus | 58.29 | 58.77 |
| AT1G13260.1 | Thale cress | nucleus | 55.8 | 58.72 |
| AT3G25730.1 | Thale cress | nucleus | 53.87 | 58.56 |
| Bra024735.1-P | Field mustard | nucleus | 59.94 | 58.33 |
| AT1G25560.1 | Thale cress | nucleus | 58.01 | 58.17 |
| Solyc05g009790.1.1 | Tomato | nucleus | 63.26 | 57.97 |
| CDY45849 | Canola | nucleus, plastid | 55.8 | 57.71 |
| Bra038346.1-P | Field mustard | nucleus, plastid | 55.8 | 57.71 |
| PGSC0003DMT400002125 | Potato | nucleus | 63.26 | 57.54 |
| Bra026509.1-P | Field mustard | nucleus | 51.66 | 57.36 |
| CDX99755 | Canola | nucleus | 53.31 | 56.76 |
| GSMUA_Achr4P03670_001 | Banana | nucleus | 45.58 | 56.12 |
| GSMUA_Achr1P05400_001 | Banana | nucleus | 46.13 | 56.04 |
| HORVU4Hr1G074300.4 | Barley | nucleus | 22.93 | 55.33 |
| GSMUA_Achr10P... | Banana | nucleus | 43.92 | 54.45 |
| GSMUA_Achr3P29380_001 | Banana | nucleus | 39.5 | 54.37 |
| CDX83547 | Canola | nucleus | 48.07 | 53.7 |
| Os05t0549800-01 | Rice | nucleus | 50.0 | 52.77 |
| TraesCS3D01G260100.1 | Wheat | nucleus | 54.14 | 52.41 |
| TraesCS3A01G259900.1 | Wheat | nucleus | 54.14 | 52.27 |
| GSMUA_Achr6P09880_001 | Banana | nucleus | 41.71 | 52.25 |
| GSMUA_Achr2P22560_001 | Banana | nucleus | 44.48 | 51.94 |
| Zm00001d009468_P001 | Maize | nucleus, plastid | 53.59 | 51.73 |
| HORVU3Hr1G064590.1 | Barley | nucleus | 27.62 | 51.55 |
| TraesCS3B01G293000.1 | Wheat | nucleus | 54.42 | 51.44 |
| GSMUA_Achr4P06710_001 | Banana | nucleus | 49.72 | 51.43 |
| TraesCS1D01G378900.1 | Wheat | nucleus | 55.52 | 51.28 |
| TraesCS1A01G372300.1 | Wheat | nucleus | 55.52 | 51.28 |
| Zm00001d043782_P001 | Maize | nucleus | 54.97 | 51.16 |
| TraesCS1B01G392300.1 | Wheat | nucleus | 55.25 | 51.15 |
| HORVU3Hr1G064640.4 | Barley | nucleus | 53.59 | 51.05 |
| Os01t0693400-01 | Rice | nucleus | 54.97 | 50.64 |
| HORVU1Hr1G082670.6 | Barley | nucleus | 54.42 | 50.13 |
| KXG22484 | Sorghum | nucleus, plastid | 55.8 | 49.51 |
| Zm00001d038907_P001 | Maize | nucleus, plastid | 54.7 | 48.77 |
| TraesCS1B01G392000.1 | Wheat | nucleus | 55.25 | 48.66 |
| GSMUA_Achr9P21470_001 | Banana | nucleus | 41.16 | 48.06 |
| EES03472 | Sorghum | nucleus, plastid | 54.42 | 47.7 |
| Zm00001d011639_P001 | Maize | nucleus | 53.31 | 47.65 |
| TraesCS1A01G372200.1 | Wheat | nucleus | 54.14 | 47.46 |
| TraesCS1B01G392200.1 | Wheat | nucleus, plastid | 54.42 | 47.36 |
| TraesCS1D01G378400.1 | Wheat | nucleus | 53.87 | 47.33 |
| GSMUA_AchrUn_... | Banana | nucleus | 48.62 | 47.06 |
| TraesCS1D01G378500.1 | Wheat | nucleus | 54.42 | 47.02 |
| TraesCS1D01G378800.1 | Wheat | nucleus | 53.31 | 46.51 |
| TraesCS1A01G372100.1 | Wheat | nucleus | 54.42 | 44.57 |
| GSMUA_Achr3P21100_001 | Banana | nucleus | 47.51 | 41.75 |
| KRG93082 | Soybean | nucleus | 27.62 | 31.35 |
| KRH67965 | Soybean | nucleus | 24.31 | 30.56 |
| KRG96220 | Soybean | nucleus | 24.03 | 29.1 |
| KRH32791 | Soybean | nucleus | 24.31 | 26.11 |
| KRH72242 | Soybean | nucleus | 23.48 | 24.71 |
| KRG97268 | Soybean | nucleus | 26.24 | 23.0 |
| KRH68988 | Soybean | nucleus | 26.52 | 22.86 |
| KRH47753 | Soybean | nucleus | 26.8 | 19.4 |
| KRH06334 | Soybean | nucleus | 29.01 | 18.04 |
Protein Annotations
| EntrezGene:100789009 | MapMan:15.5.5.3 | MapMan:15.5.7.5 | Gene3D:2.40.330.10 | Gene3D:3.30.730.10 | EMBL:ACUP02012724 |
| InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:B3_DNA-bd | InterPro:DNA-bd_dom_sf | InterPro:DNA-bd_pseudobarrel_sf | EnsemblPlantsGene:GLYMA_20G186200 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | UniProt:I1NHL5 | InterPro:IPR001471 |
| InterPro:IPR003340 | InterPro:IPR015300 | InterPro:IPR036955 | EnsemblPlants:KRG92025 | ProteinID:KRG92025 | ProteinID:KRG92025.1 |
| PFAM:PF00847 | PFAM:PF02362 | PFscan:PS50863 | PFscan:PS51032 | PANTHER:PTHR31140 | PANTHER:PTHR31140:SF21 |
| SMART:SM00380 | SMART:SM01019 | SUPFAM:SSF101936 | SUPFAM:SSF54171 | UniParc:UPI000233DA7E | SEG:seg |
Description
hypothetical protein
Coordinates
chr20:+:42479192..42480384
Molecular Weight (calculated)
39345.7 Da
IEP (calculated)
9.293
GRAVY (calculated)
-0.407
Length
362 amino acids
Sequence
(BLAST)
(BLAST)
001: MDGGSVTDET TTTSNSLSVP ANLSPPPLSL VGSGATAVVY PDGCCVSGEA ESRKLPSSKY KGVVPQPNGR WGAQIYEKHQ RVWLGTFNEE DEAARAYDIA
101: AHRFRGRDAV TNFKPLAGAD DAEAEFLSTH SKSEIVDMLR KHTYDNELQQ STRGGRRRRD AETASSGAFD AKAREQLFEK TVTQSDVGKL NRLVIPKQHA
201: EKHFPLSGSG GGALPCMAAA AGAKGMLLNF EDVGGKVWRF RYSYWNSSQS YVLTKGWSRF VKEKNLRAGD AVQFFKSTGL DRQLYIDCKA RSGKVNNNAA
301: GLFIPVGPVV EPVQMVRLFG VDLLKLPVPG SDGIGVGCDG KRKEMELFAF ECSKKLKVIG AL
101: AHRFRGRDAV TNFKPLAGAD DAEAEFLSTH SKSEIVDMLR KHTYDNELQQ STRGGRRRRD AETASSGAFD AKAREQLFEK TVTQSDVGKL NRLVIPKQHA
201: EKHFPLSGSG GGALPCMAAA AGAKGMLLNF EDVGGKVWRF RYSYWNSSQS YVLTKGWSRF VKEKNLRAGD AVQFFKSTGL DRQLYIDCKA RSGKVNNNAA
301: GLFIPVGPVV EPVQMVRLFG VDLLKLPVPG SDGIGVGCDG KRKEMELFAF ECSKKLKVIG AL
001: MEYSCVDDSS TTSESLSIST TPKPTTTTEK KLSSPPATSM RLYRMGSGGS SVVLDSENGV ETESRKLPSS KYKGVVPQPN GRWGAQIYEK HQRVWLGTFN
101: EEEEAASSYD IAVRRFRGRD AVTNFKSQVD GNDAESAFLD AHSKAEIVDM LRKHTYADEF EQSRRKFVNG DGKRSGLETA TYGNDAVLRA REVLFEKTVT
201: PSDVGKLNRL VIPKQHAEKH FPLPAMTTAM GMNPSPTKGV LINLEDRTGK VWRFRYSYWN SSQSYVLTKG WSRFVKEKNL RAGDVVCFER STGPDRQLYI
301: HWKVRSSPVQ TVVRLFGVNI FNVSNEKPND VAVECVGKKR SREDDLFSLG CSKKQAIINI L
101: EEEEAASSYD IAVRRFRGRD AVTNFKSQVD GNDAESAFLD AHSKAEIVDM LRKHTYADEF EQSRRKFVNG DGKRSGLETA TYGNDAVLRA REVLFEKTVT
201: PSDVGKLNRL VIPKQHAEKH FPLPAMTTAM GMNPSPTKGV LINLEDRTGK VWRFRYSYWN SSQSYVLTKG WSRFVKEKNL RAGDVVCFER STGPDRQLYI
301: HWKVRSSPVQ TVVRLFGVNI FNVSNEKPND VAVECVGKKR SREDDLFSLG CSKKQAIINI L
Arabidopsis Description
TEM1AP2/ERF and B3 domain-containing transcription repressor TEM1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6M5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.