Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX97996 | Canola | nucleus | 86.05 | 91.08 |
| Bra019821.1-P | Field mustard | nucleus | 89.53 | 90.32 |
| CDY61361 | Canola | nucleus | 85.76 | 90.21 |
| CDY72302 | Canola | nucleus | 85.17 | 89.88 |
| CDY58354 | Canola | nucleus | 84.59 | 89.26 |
| Bra026917.1-P | Field mustard | nucleus | 88.08 | 89.12 |
| AT3G25730.1 | Thale cress | nucleus | 72.67 | 75.08 |
| AT1G68840.1 | Thale cress | nucleus | 65.99 | 64.49 |
| AT1G25560.1 | Thale cress | nucleus | 66.86 | 63.71 |
| GSMUA_Achr5P09950_001 | Banana | nucleus | 56.1 | 59.94 |
| GSMUA_Achr1P05400_001 | Banana | nucleus | 51.74 | 59.73 |
| VIT_01s0011g03070.t01 | Wine grape | nucleus | 64.53 | 58.73 |
| KRH34761 | Soybean | nucleus | 58.72 | 57.55 |
| GSMUA_Achr4P03670_001 | Banana | nucleus | 48.55 | 56.8 |
| KRH75484 | Soybean | nucleus | 63.37 | 56.77 |
| Solyc05g009790.1.1 | Tomato | nucleus | 64.24 | 55.95 |
| KRG92025 | Soybean | nucleus | 58.72 | 55.8 |
| PGSC0003DMT400002125 | Potato | nucleus | 64.53 | 55.78 |
| GSMUA_Achr3P29380_001 | Banana | nucleus | 42.15 | 55.13 |
| KRH70603 | Soybean | nucleus | 63.37 | 54.36 |
| GSMUA_Achr10P... | Banana | nucleus | 45.06 | 53.08 |
| GSMUA_Achr2P22560_001 | Banana | nucleus | 47.67 | 52.9 |
| GSMUA_Achr6P09880_001 | Banana | nucleus | 43.31 | 51.56 |
| TraesCS3D01G260100.1 | Wheat | nucleus | 54.94 | 50.53 |
| TraesCS3A01G259900.1 | Wheat | nucleus | 54.36 | 49.87 |
| TraesCS3B01G293000.1 | Wheat | nucleus | 55.23 | 49.61 |
| Os05t0549800-01 | Rice | nucleus | 49.42 | 49.56 |
| GSMUA_Achr4P06710_001 | Banana | nucleus | 50.0 | 49.14 |
| Zm00001d009468_P001 | Maize | nucleus, plastid | 53.49 | 49.07 |
| Os01t0693400-01 | Rice | nucleus | 55.81 | 48.85 |
| Zm00001d043782_P001 | Maize | nucleus | 55.23 | 48.84 |
| HORVU4Hr1G074300.4 | Barley | nucleus | 21.22 | 48.67 |
| GSMUA_Achr9P21470_001 | Banana | nucleus | 43.6 | 48.39 |
| HORVU3Hr1G064640.4 | Barley | nucleus | 53.2 | 48.16 |
| TraesCS1D01G378900.1 | Wheat | nucleus | 54.65 | 47.96 |
| HORVU3Hr1G064590.1 | Barley | nucleus | 27.03 | 47.94 |
| TraesCS1A01G372300.1 | Wheat | nucleus | 54.07 | 47.45 |
| HORVU1Hr1G082670.6 | Barley | nucleus | 54.07 | 47.33 |
| TraesCS1B01G392300.1 | Wheat | nucleus | 53.78 | 47.31 |
| GSMUA_AchrUn_... | Banana | nucleus | 51.16 | 47.06 |
| Zm00001d038907_P001 | Maize | nucleus, plastid | 55.52 | 47.04 |
| KXG22484 | Sorghum | nucleus, plastid | 55.52 | 46.81 |
| EES03472 | Sorghum | nucleus, plastid | 55.81 | 46.49 |
| Zm00001d011639_P001 | Maize | nucleus | 53.78 | 45.68 |
| TraesCS1B01G392000.1 | Wheat | nucleus | 53.78 | 45.01 |
| TraesCS1D01G378400.1 | Wheat | nucleus | 53.78 | 44.9 |
| TraesCS1A01G372200.1 | Wheat | nucleus | 53.49 | 44.55 |
| TraesCS1D01G378500.1 | Wheat | nucleus | 53.78 | 44.15 |
| TraesCS1D01G378800.1 | Wheat | nucleus | 53.2 | 44.1 |
| TraesCS1B01G392200.1 | Wheat | nucleus, plastid | 53.2 | 43.99 |
| TraesCS1A01G372100.1 | Wheat | nucleus | 53.2 | 41.4 |
| GSMUA_Achr3P21100_001 | Banana | nucleus | 47.09 | 39.32 |
| AT2G36080.1 | Thale cress | nucleus | 26.16 | 36.89 |
| AT1G50680.1 | Thale cress | nucleus | 30.52 | 31.16 |
| AT5G06250.4 | Thale cress | nucleus | 25.58 | 30.99 |
| AT2G46870.1 | Thale cress | nucleus | 26.45 | 29.35 |
| AT4G01500.1 | Thale cress | nucleus | 27.03 | 27.93 |
| AT1G51120.1 | Thale cress | nucleus | 28.49 | 27.84 |
| AT3G61970.1 | Thale cress | nucleus | 24.13 | 27.76 |
| AT1G01030.1 | Thale cress | nucleus | 27.03 | 25.98 |
| AT3G11580.3 | Thale cress | cytosol, endoplasmic reticulum, nucleus | 24.42 | 22.64 |
Protein Annotations
| MapMan:15.5.5.3 | MapMan:15.5.7.5 | PDB:1WID | Gene3D:2.40.330.10 | Gene3D:3.30.730.10 | EntrezGene:837886 |
| ProteinID:AAG09554.1 | EMBL:AB013886 | ProteinID:AEE28991.1 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | ArrayExpress:AT1G13260 |
| EnsemblPlantsGene:AT1G13260 | RefSeq:AT1G13260 | TAIR:AT1G13260 | RefSeq:AT1G13260-TAIR-G | EnsemblPlants:AT1G13260.1 | TAIR:AT1G13260.1 |
| EMBL:AY063855 | EMBL:AY091291 | InterPro:B3_DNA-bd | InterPro:DNA-bd_dom_sf | InterPro:DNA-bd_pseudobarrel_sf | GO:GO:0000003 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009719 | GO:GO:0009741 | GO:GO:0009791 | GO:GO:0009873 | GO:GO:0009908 | GO:GO:0009910 |
| GO:GO:0009987 | GO:GO:0045892 | GO:GO:0048366 | GO:GO:0048527 | InterPro:IPR001471 | InterPro:IPR003340 |
| InterPro:IPR015300 | InterPro:IPR036955 | RefSeq:NP_172784.1 | PFAM:PF00847 | PFAM:PF02362 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PFscan:PS50863 | PFscan:PS51032 |
| PANTHER:PTHR31140 | PANTHER:PTHR31140:SF9 | UniProt:Q9ZWM9 | Symbol:RAV1 | SMART:SM00380 | SMART:SM01019 |
| SUPFAM:SSF101936 | SUPFAM:SSF54171 | UniParc:UPI000013314B | SEG:seg | : | : |
Description
RAV1AP2/ERF and B3 domain-containing transcription factor RAV1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZWM9]
Coordinates
chr1:+:4542168..4543970
Molecular Weight (calculated)
38599.2 Da
IEP (calculated)
9.890
GRAVY (calculated)
-0.693
Length
344 amino acids
Sequence
(BLAST)
(BLAST)
001: MESSSVDEST TSTGSICETP AITPAKKSSV GNLYRMGSGS SVVLDSENGV EAESRKLPSS KYKGVVPQPN GRWGAQIYEK HQRVWLGTFN EEDEAARAYD
101: VAVHRFRRRD AVTNFKDVKM DEDEVDFLNS HSKSEIVDML RKHTYNEELE QSKRRRNGNG NMTRTLLTSG LSNDGVSTTG FRSAEALFEK AVTPSDVGKL
201: NRLVIPKHHA EKHFPLPSSN VSVKGVLLNF EDVNGKVWRF RYSYWNSSQS YVLTKGWSRF VKEKNLRAGD VVSFSRSNGQ DQQLYIGWKS RSGSDLDAGR
301: VLRLFGVNIS PESSRNDVVG NKRVNDTEML SLVCSKKQRI FHAS
101: VAVHRFRRRD AVTNFKDVKM DEDEVDFLNS HSKSEIVDML RKHTYNEELE QSKRRRNGNG NMTRTLLTSG LSNDGVSTTG FRSAEALFEK AVTPSDVGKL
201: NRLVIPKHHA EKHFPLPSSN VSVKGVLLNF EDVNGKVWRF RYSYWNSSQS YVLTKGWSRF VKEKNLRAGD VVSFSRSNGQ DQQLYIGWKS RSGSDLDAGR
301: VLRLFGVNIS PESSRNDVVG NKRVNDTEML SLVCSKKQRI FHAS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.