Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
- endoplasmic reticulum 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra001411.1-P | Field mustard | nucleus | 52.29 | 82.2 |
| CDX73868 | Canola | nucleus | 52.29 | 82.2 |
| Bra041023.1-P | Field mustard | nucleus | 57.14 | 80.3 |
| CDY08512 | Canola | nucleus | 53.64 | 80.24 |
| Bra034828.1-P | Field mustard | nucleus | 54.72 | 78.68 |
| CDY01036 | Canola | nucleus | 54.45 | 78.6 |
| CDY62470 | Canola | nucleus | 45.55 | 74.12 |
| AT5G06250.4 | Thale cress | nucleus | 43.94 | 57.39 |
| AT2G36080.1 | Thale cress | nucleus | 35.85 | 54.51 |
| GSMUA_Achr9P02600_001 | Banana | nucleus | 24.8 | 47.67 |
| GSMUA_Achr3P19210_001 | Banana | nucleus | 25.34 | 46.77 |
| TraesCS5B01G126200.1 | Wheat | nucleus | 31.0 | 43.4 |
| TraesCS5D01G134700.1 | Wheat | nucleus | 31.0 | 43.23 |
| TraesCS5A01G127100.1 | Wheat | nucleus | 31.0 | 43.23 |
| GSMUA_Achr6P13140_001 | Banana | nucleus | 28.3 | 42.51 |
| TraesCS2A01G460700.1 | Wheat | nucleus | 30.46 | 42.48 |
| TraesCS2B01G482400.1 | Wheat | nucleus | 30.46 | 42.32 |
| GSMUA_Achr6P35600_001 | Banana | nucleus | 27.49 | 42.15 |
| TraesCS2D01G460900.1 | Wheat | nucleus | 29.65 | 41.2 |
| TraesCS4D01G114900.1 | Wheat | nucleus | 31.0 | 40.78 |
| GSMUA_Achr9P08980_001 | Banana | nucleus | 17.79 | 40.74 |
| VIT_08s0007g02810.t01 | Wine grape | nucleus | 31.27 | 40.7 |
| KXG27771 | Sorghum | nucleus | 29.92 | 40.51 |
| TraesCS4A01G198300.2 | Wheat | nucleus | 30.46 | 40.5 |
| GSMUA_Achr11P... | Banana | nucleus | 19.95 | 40.0 |
| TraesCS4B01G117100.1 | Wheat | nucleus | 29.92 | 39.78 |
| KRH67965 | Soybean | nucleus | 30.73 | 39.58 |
| Os11t0156000-01 | Rice | nucleus | 29.38 | 39.07 |
| Zm00001d023446_P001 | Maize | nucleus | 29.38 | 38.52 |
| HORVU4Hr1G021650.22 | Barley | nucleus | 28.57 | 37.99 |
| KRG96220 | Soybean | nucleus | 30.46 | 37.79 |
| HORVU5Hr1G040620.4 | Barley | nucleus | 27.22 | 36.86 |
| KRH32791 | Soybean | nucleus | 33.42 | 36.8 |
| KRH72242 | Soybean | nucleus | 33.96 | 36.63 |
| Zm00001d052591_P001 | Maize | nucleus | 30.19 | 36.48 |
| Solyc09g010230.1.1 | Tomato | nucleus | 33.69 | 36.23 |
| PGSC0003DMT400023077 | Potato | nucleus | 32.61 | 36.12 |
| KXG22988 | Sorghum | plastid | 31.0 | 35.94 |
| AT3G61970.1 | Thale cress | nucleus | 25.07 | 31.1 |
| AT2G46870.1 | Thale cress | nucleus | 25.88 | 30.97 |
| Os12t0157000-01 | Rice | cytosol, nucleus | 16.71 | 29.52 |
| AT4G01500.1 | Thale cress | nucleus | 22.37 | 24.92 |
| AT1G68840.1 | Thale cress | nucleus | 23.18 | 24.43 |
| AT1G13260.1 | Thale cress | nucleus | 22.64 | 24.42 |
| AT1G01030.1 | Thale cress | nucleus | 23.18 | 24.02 |
| AT3G25730.1 | Thale cress | nucleus | 21.29 | 23.72 |
| AT1G25560.1 | Thale cress | nucleus | 22.64 | 23.27 |
| GSMUA_Achr6P18320_001 | Banana | nucleus | 20.49 | 22.35 |
| AT1G50680.1 | Thale cress | nucleus | 15.36 | 16.91 |
| AT1G51120.1 | Thale cress | nucleus | 15.36 | 16.19 |
Protein Annotations
| MapMan:15.5.5.3 | Gene3D:2.40.330.10 | EntrezGene:820331 | UniProt:A0A1I9LT60 | ProteinID:ANM65768.1 | ArrayExpress:AT3G11580 |
| EnsemblPlantsGene:AT3G11580 | RefSeq:AT3G11580 | TAIR:AT3G11580 | RefSeq:AT3G11580-TAIR-G | EnsemblPlants:AT3G11580.3 | InterPro:B3_DNA-bd |
| InterPro:DNA-bd_pseudobarrel_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:IPR003340 | InterPro:IPR015300 | RefSeq:NP_001327714.1 | PFAM:PF02362 | PFscan:PS50863 | PANTHER:PTHR31140 |
| PANTHER:PTHR31140:SF2 | SMART:SM01019 | SUPFAM:SSF101936 | TMHMM:TMhelix | UniParc:UPI0008490C59 | SEG:seg |
Description
AP2/B3-like transcriptional factor family protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LT60]
Coordinates
chr3:-:3648960..3651489
Molecular Weight (calculated)
42956.2 Da
IEP (calculated)
8.981
GRAVY (calculated)
-0.238
Length
371 amino acids
Sequence
(BLAST)
(BLAST)
001: MSVNHYHNTL SLHHHHQNDV AIAQRESLFE KSLTPSDVGK LNRLVIPKQH AEKYFPLNNN NNNGGSGDDV ATTEKGMLLS FEDESGKCWK FRYSYWNSSQ
101: SYVLTKGWSR YVKDKHLDAG DVVFFQRHRF DLHRLFIGWR RRGEASSSPA VSVVSQEALV NTTAYWSGLT TPYRQVHAST TYPNIHQEYS HYGAVVDHAQ
201: SIPPVVAGSS RTVRLFGVNL ECHGDAVEPP PRPDVYNDQH IYYYSTPHPM VNIFFFYIFV RFKFLLTYDI IIKQMSWLFL ETRQMKISNF KIDLKEIFMF
301: NKLYKGGIRE NNTIHLTVKP HGQFGFYLIT LICFVYSFVS VASFCSLINI SRKYIVSCEN SLYFGFTILI C
101: SYVLTKGWSR YVKDKHLDAG DVVFFQRHRF DLHRLFIGWR RRGEASSSPA VSVVSQEALV NTTAYWSGLT TPYRQVHAST TYPNIHQEYS HYGAVVDHAQ
201: SIPPVVAGSS RTVRLFGVNL ECHGDAVEPP PRPDVYNDQH IYYYSTPHPM VNIFFFYIFV RFKFLLTYDI IIKQMSWLFL ETRQMKISNF KIDLKEIFMF
301: NKLYKGGIRE NNTIHLTVKP HGQFGFYLIT LICFVYSFVS VASFCSLINI SRKYIVSCEN SLYFGFTILI C
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.