Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX76605 | Canola | nucleus | 85.62 | 87.67 |
| CDY11388 | Canola | nucleus | 85.62 | 87.67 |
| Bra007646.1-P | Field mustard | nucleus | 84.95 | 86.99 |
| Bra003482.1-P | Field mustard | nucleus | 81.94 | 85.66 |
| CDX67872 | Canola | nucleus | 80.94 | 84.91 |
| CDY69432 | Canola | nucleus | 78.6 | 84.53 |
| CDY58763 | Canola | nucleus | 80.27 | 75.47 |
| CDY58764 | Canola | nucleus | 80.27 | 75.0 |
| Bra014415.1-P | Field mustard | nucleus | 79.93 | 74.69 |
| AT2G46870.1 | Thale cress | nucleus | 62.88 | 60.65 |
| Zm00001d035982_P001 | Maize | nucleus | 17.39 | 59.09 |
| TraesCS7A01G020800.1 | Wheat | nucleus | 27.42 | 41.41 |
| Os06t0107800-02 | Rice | nucleus | 27.09 | 40.7 |
| TraesCS7A01G461000.1 | Wheat | nucleus | 26.42 | 40.51 |
| GSMUA_Achr4P30170_001 | Banana | nucleus | 33.44 | 40.16 |
| Zm00001d048815_P001 | Maize | nucleus | 31.1 | 40.09 |
| GSMUA_Achr4P26430_001 | Banana | nucleus | 33.44 | 40.0 |
| TraesCS7D01G448900.1 | Wheat | nucleus | 26.09 | 39.8 |
| TraesCS7B01G362500.1 | Wheat | nucleus | 25.75 | 39.29 |
| Zm00001d029749_P001 | Maize | nucleus | 35.79 | 39.19 |
| HORVU0Hr1G022200.1 | Barley | nucleus | 26.09 | 39.0 |
| Os03t0120900-01 | Rice | nucleus | 40.47 | 38.91 |
| TraesCS4B01G348500.1 | Wheat | nucleus | 41.47 | 38.87 |
| TraesCS4A01G472700.1 | Wheat | nucleus | 28.09 | 38.71 |
| EER92015 | Sorghum | nucleus | 35.45 | 38.69 |
| HORVU7Hr1G002230.1 | Barley | nucleus | 28.43 | 38.64 |
| Zm00001d010077_P001 | Maize | nucleus | 33.44 | 38.61 |
| TraesCS7A01G020700.1 | Wheat | nucleus | 27.76 | 38.6 |
| Zm00001d047359_P001 | Maize | nucleus | 35.45 | 38.27 |
| TraesCS7D01G017000.1 | Wheat | nucleus | 27.76 | 38.25 |
| TraesCS5A01G516600.1 | Wheat | nucleus | 40.47 | 38.17 |
| TraesCS1A01G200500.1 | Wheat | nucleus | 35.12 | 37.77 |
| AT1G01030.1 | Thale cress | nucleus | 45.15 | 37.71 |
| KXG19112 | Sorghum | nucleus | 25.75 | 37.56 |
| TraesCS1B01G215000.1 | Wheat | nucleus | 34.45 | 37.45 |
| GSMUA_Achr5P12850_001 | Banana | nucleus | 26.09 | 36.97 |
| Zm00001d027409_P001 | Maize | nucleus | 40.13 | 36.7 |
| OQU93364 | Sorghum | nucleus | 40.47 | 36.67 |
| Zm00001d024103_P001 | Maize | nucleus | 27.42 | 36.61 |
| Zm00001d035903_P001 | Maize | nucleus | 27.42 | 36.61 |
| AT2G36080.1 | Thale cress | nucleus | 29.77 | 36.48 |
| Os10t0537100-00 | Rice | nucleus | 37.46 | 35.9 |
| GSMUA_Achr4P24970_001 | Banana | nucleus | 28.09 | 35.74 |
| HORVU1Hr1G051780.2 | Barley | nucleus | 34.78 | 35.49 |
| GSMUA_Achr1P03600_001 | Banana | nucleus | 38.8 | 35.15 |
| TraesCS1D01G203900.1 | Wheat | nucleus | 34.11 | 35.05 |
| HORVU4Hr1G084950.3 | Barley | nucleus | 39.8 | 34.9 |
| GSMUA_Achr7P04630_001 | Banana | nucleus | 23.75 | 34.47 |
| KXG19111 | Sorghum | nucleus | 27.09 | 34.03 |
| HORVU7Hr1G046950.1 | Barley | nucleus | 31.1 | 33.94 |
| GSMUA_Achr4P12210_001 | Banana | nucleus | 24.75 | 33.04 |
| Os04t0581400-01 | Rice | nucleus | 32.11 | 32.76 |
| KRG97268 | Soybean | nucleus | 44.82 | 32.45 |
| KRH68988 | Soybean | nucleus | 45.15 | 32.14 |
| VIT_15s0048g02370.t01 | Wine grape | nucleus | 49.5 | 32.1 |
| GSMUA_AchrUn_... | Banana | cytosol | 25.75 | 31.95 |
| Zm00001d024545_P001 | Maize | nucleus | 26.42 | 31.73 |
| GSMUA_Achr5P10220_001 | Banana | nucleus | 28.76 | 31.62 |
| GSMUA_Achr5P20340_001 | Banana | nucleus | 35.45 | 31.45 |
| AT5G06250.4 | Thale cress | nucleus | 29.77 | 31.34 |
| Os02t0683500-01 | Rice | nucleus | 42.81 | 31.07 |
| EES13386 | Sorghum | nucleus | 26.09 | 30.83 |
| GSMUA_Achr9P18780_001 | Banana | nucleus | 28.76 | 30.07 |
| Os08t0157700-00 | Rice | nucleus | 28.76 | 29.97 |
| Zm00001d026005_P001 | Maize | nucleus | 40.47 | 29.95 |
| TraesCS6B01G286900.1 | Wheat | nucleus | 40.8 | 29.83 |
| HORVU6Hr1G066190.2 | Barley | nucleus | 40.8 | 29.83 |
| Zm00001d002562_P001 | Maize | nucleus | 40.8 | 29.83 |
| TraesCS2B01G412700.1 | Wheat | nucleus | 40.47 | 29.58 |
| GSMUA_Achr2P00400_001 | Banana | nucleus | 28.43 | 29.51 |
| TraesCS2A01G394700.1 | Wheat | nucleus | 39.8 | 29.46 |
| TraesCS6A01G259600.1 | Wheat | nucleus | 40.47 | 29.23 |
| TraesCS6D01G240600.1 | Wheat | nucleus | 40.47 | 29.23 |
| TraesCS2D01G392400.1 | Wheat | nucleus | 39.8 | 29.1 |
| EES12712 | Sorghum | nucleus | 40.8 | 29.05 |
| VIT_02s0025g03000.t01 | Wine grape | nucleus | 44.15 | 28.95 |
| Zm00001d051471_P001 | Maize | nucleus | 39.8 | 28.33 |
| GSMUA_Achr2P10230_001 | Banana | nucleus | 28.76 | 28.29 |
| Zm00001d017618_P001 | Maize | nucleus | 39.8 | 28.2 |
| AT4G01500.1 | Thale cress | nucleus | 31.1 | 27.93 |
| KRH47753 | Soybean | nucleus | 45.48 | 27.2 |
| EES07445 | Sorghum | nucleus | 39.46 | 27.19 |
| AT3G11580.3 | Thale cress | cytosol, endoplasmic reticulum, nucleus | 31.1 | 25.07 |
| AT1G68840.1 | Thale cress | nucleus | 29.43 | 25.0 |
| AT1G13260.1 | Thale cress | nucleus | 27.76 | 24.13 |
| KRH06334 | Soybean | nucleus | 46.49 | 23.88 |
| AT1G25560.1 | Thale cress | nucleus | 28.76 | 23.82 |
| AT3G25730.1 | Thale cress | nucleus | 25.75 | 23.12 |
| AT1G50680.1 | Thale cress | nucleus | 18.73 | 16.62 |
| AT1G51120.1 | Thale cress | nucleus | 19.06 | 16.19 |
Protein Annotations
| MapMan:15.5.5.3 | Gene3D:2.40.330.10 | EntrezGene:825370 | UniProt:A0A178V7R1 | ProteinID:AEE80288.1 | EMBL:AK117646 |
| ArrayExpress:AT3G61970 | EnsemblPlantsGene:AT3G61970 | RefSeq:AT3G61970 | TAIR:AT3G61970 | RefSeq:AT3G61970-TAIR-G | EnsemblPlants:AT3G61970.1 |
| TAIR:AT3G61970.1 | EMBL:AY085197 | InterPro:B3_DNA-bd | EMBL:BT025866 | UniProt:C3VMM3 | ProteinID:CAB71904.1 |
| InterPro:DNA-bd_pseudobarrel_sf | EMBL:FJ873732 | GO:GO:0000003 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009653 | GO:GO:0009791 | GO:GO:0009908 | GO:GO:0009987 | GO:GO:0048366 |
| GO:GO:1901371 | InterPro:IPR003340 | InterPro:IPR015300 | Symbol:NGA2 | RefSeq:NP_191756.1 | ProteinID:OAP01738.1 |
| PFAM:PF02362 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020003 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0025022 | PO:PO:0025281 | PFscan:PS50863 |
| PANTHER:PTHR31140 | PANTHER:PTHR31140:SF4 | UniProt:Q9M268 | SMART:SM01019 | SUPFAM:SSF101936 | UniParc:UPI00000A9BC4 |
| SEG:seg | : | : | : | : | : |
Description
NGA2NGA2 [Source:UniProtKB/TrEMBL;Acc:A0A178V7R1]
Coordinates
chr3:+:22951323..22953265
Molecular Weight (calculated)
34272.3 Da
IEP (calculated)
8.941
GRAVY (calculated)
-0.782
Length
299 amino acids
Sequence
(BLAST)
(BLAST)
001: MNQEDKEKPI EEASSSMERE HMFDKVVTPS DVGKLNRLVI PKQHAERYFP LDNSTTNDSN KGLLLNFEDR SGNSWRFRYS YWNSSQSYVM TKGWSRFVKD
101: KKLDAGDIVS FQRDSCNKDK LYIDWRRRPK IPDHHHQQFA GAMFPRFYTF PHPQMPTNYE THNLYHRFHQ RDLGIGYYVR SMERSHPTAV IESVPVMMQR
201: RAQVASMASR GEKRLRLFGV DMECGGGGGS VNSTEEESSS SGGSIPRGRV SMVGAGSLLQ LRLVSSDDES LVAMEAASLE DHHFFTKKGK PSLSFDLDR
101: KKLDAGDIVS FQRDSCNKDK LYIDWRRRPK IPDHHHQQFA GAMFPRFYTF PHPQMPTNYE THNLYHRFHQ RDLGIGYYVR SMERSHPTAV IESVPVMMQR
201: RAQVASMASR GEKRLRLFGV DMECGGGGGS VNSTEEESSS SGGSIPRGRV SMVGAGSLLQ LRLVSSDDES LVAMEAASLE DHHFFTKKGK PSLSFDLDR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.