Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G461000.1 | Wheat | nucleus | 90.5 | 92.82 |
| TraesCS7D01G448900.1 | Wheat | nucleus | 90.0 | 91.84 |
| TraesCS7B01G362500.1 | Wheat | nucleus | 89.5 | 91.33 |
| HORVU7Hr1G002230.1 | Barley | nucleus | 75.5 | 68.64 |
| Os06t0107800-02 | Rice | nucleus | 58.5 | 58.79 |
| Zm00001d035903_P001 | Maize | nucleus | 53.5 | 47.77 |
| Zm00001d024103_P001 | Maize | nucleus | 53.0 | 47.32 |
| KXG19112 | Sorghum | nucleus | 47.5 | 46.34 |
| KXG19111 | Sorghum | nucleus | 52.5 | 44.12 |
| CDY67348 | Canola | nucleus | 29.0 | 38.67 |
| HORVU4Hr1G074300.4 | Barley | nucleus | 29.0 | 38.67 |
| HORVU3Hr1G064590.1 | Barley | nucleus | 37.5 | 38.66 |
| CDY43060 | Canola | cytosol | 28.5 | 34.97 |
| HORVU3Hr1G010200.1 | Barley | mitochondrion | 36.0 | 32.88 |
| GSMUA_Achr7P04630_001 | Banana | nucleus | 33.0 | 32.04 |
| HORVU1Hr1G051780.2 | Barley | nucleus | 44.5 | 30.38 |
| Bra040478.1-P | Field mustard | nucleus | 41.5 | 28.33 |
| Bra004501.1-P | Field mustard | nucleus | 42.0 | 28.28 |
| CDY41564 | Canola | nucleus | 42.0 | 28.28 |
| CDX80053 | Canola | nucleus | 42.0 | 28.28 |
| CDY69432 | Canola | nucleus | 39.0 | 28.06 |
| CDX67872 | Canola | nucleus | 39.5 | 27.72 |
| Bra003482.1-P | Field mustard | nucleus | 39.5 | 27.62 |
| CDX83351 | Canola | nucleus | 42.5 | 27.6 |
| Solyc08g013700.1.1 | Tomato | nucleus | 40.5 | 27.55 |
| Bra000434.1-P | Field mustard | nucleus | 42.5 | 27.42 |
| CDY27515 | Canola | nucleus | 41.5 | 27.3 |
| CDY48008 | Canola | nucleus | 41.5 | 27.3 |
| AT2G46870.1 | Thale cress | nucleus | 42.0 | 27.1 |
| GSMUA_AchrUn_... | Banana | cytosol | 32.5 | 26.97 |
| GSMUA_Achr4P12210_001 | Banana | nucleus | 30.0 | 26.79 |
| CDY50908 | Canola | nucleus | 42.0 | 26.67 |
| PGSC0003DMT400015010 | Potato | nucleus | 40.0 | 26.67 |
| Bra007646.1-P | Field mustard | nucleus | 38.5 | 26.37 |
| CDY11388 | Canola | nucleus | 38.5 | 26.37 |
| CDX76605 | Canola | nucleus | 38.5 | 26.37 |
| AT3G61970.1 | Thale cress | nucleus | 39.0 | 26.09 |
| HORVU5Hr1G040620.4 | Barley | nucleus | 35.5 | 25.91 |
| HORVU4Hr1G021650.22 | Barley | nucleus | 36.0 | 25.81 |
| PGSC0003DMT400015011 | Potato | nucleus | 40.0 | 25.56 |
| HORVU7Hr1G046950.1 | Barley | nucleus | 35.0 | 25.55 |
| CDY58763 | Canola | nucleus | 39.5 | 24.84 |
| CDY58764 | Canola | nucleus | 39.5 | 24.69 |
| Bra014415.1-P | Field mustard | nucleus | 39.5 | 24.69 |
| Solyc08g013690.1.1 | Tomato | nucleus | 39.5 | 24.38 |
| HORVU3Hr1G010100.2 | Barley | nucleus | 39.0 | 24.38 |
| AT4G01500.1 | Thale cress | nucleus | 40.0 | 24.02 |
| CDY15208 | Canola | nucleus | 38.5 | 23.91 |
| CDY07140 | Canola | nucleus | 36.5 | 23.86 |
| HORVU4Hr1G084950.3 | Barley | nucleus | 40.5 | 23.75 |
| CDY49614 | Canola | nucleus | 36.5 | 23.55 |
| Bra037417.1-P | Field mustard | nucleus | 36.5 | 23.55 |
| Bra008552.1-P | Field mustard | nucleus | 39.0 | 23.08 |
| CDX97251 | Canola | nucleus | 39.0 | 23.01 |
| Solyc08g083400.2.1 | Tomato | nucleus | 38.0 | 22.75 |
| CDX90001 | Canola | nucleus | 39.0 | 22.67 |
| HORVU6Hr1G066190.2 | Barley | nucleus | 46.0 | 22.49 |
| HORVU3Hr1G010240.1 | Barley | nucleus | 39.0 | 22.41 |
| Bra030497.1-P | Field mustard | nucleus | 39.5 | 22.32 |
| HORVU3Hr1G010060.1 | Barley | nucleus | 39.0 | 22.16 |
| Bra033294.1-P | Field mustard | nucleus | 38.0 | 22.09 |
| HORVU4Hr1G082090.2 | Barley | mitochondrion | 38.0 | 22.09 |
| AT1G01030.1 | Thale cress | nucleus | 39.0 | 21.79 |
| HORVU1Hr1G082670.6 | Barley | nucleus | 41.5 | 21.12 |
| HORVU3Hr1G064640.4 | Barley | nucleus | 40.0 | 21.05 |
| KRG97268 | Soybean | nucleus | 42.5 | 20.58 |
| PGSC0003DMT400031863 | Potato | nucleus | 41.0 | 20.2 |
| HORVU3Hr1G010190.5 | Barley | nucleus | 38.5 | 20.05 |
| HORVU3Hr1G010140.3 | Barley | nucleus | 38.5 | 19.85 |
| KRH68988 | Soybean | nucleus | 41.0 | 19.52 |
| VIT_02s0025g03000.t01 | Wine grape | nucleus | 41.5 | 18.2 |
| VIT_15s0048g02370.t01 | Wine grape | nucleus | 41.5 | 18.0 |
| HORVU4Hr1G082030.2 | Barley | nucleus | 22.0 | 17.32 |
| KRH47753 | Soybean | nucleus | 42.0 | 16.8 |
| HORVU3Hr1G010260.2 | Barley | mitochondrion | 15.5 | 15.66 |
| KRH06334 | Soybean | nucleus | 42.5 | 14.6 |
Protein Annotations
| MapMan:15.5.5.3 | Gene3D:2.40.330.10 | UniProt:A0A287E791 | InterPro:B3_DNA-bd | InterPro:DNA-bd_pseudobarrel_sf | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:HORVU0Hr1G022200 | EnsemblPlants:HORVU0Hr1G022200.1 | InterPro:IPR003340 | InterPro:IPR015300 |
| PFAM:PF02362 | PFscan:PS50863 | PANTHER:PTHR31140 | PANTHER:PTHR31140:SF4 | SMART:SM01019 | SUPFAM:SSF101936 |
| UniParc:UPI000B47BA5D | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chrchrUn:-:114340106..114340855
Molecular Weight (calculated)
21121.1 Da
IEP (calculated)
10.364
GRAVY (calculated)
-0.302
Length
200 amino acids
Sequence
(BLAST)
(BLAST)
001: MALTAALGSR GAEQDQDGGD GNGGNGNGRG GGEEMMIMRE HMFDKVVTPS DVGKLNRLVV PKHFAERHLL PRLPGGGAAG AACPGAVLRF EDGRGGGKAW
101: AFRFSYWSSS QSYVITKGWS SFVRDRRLAA GDTVSFCRAG ARLFIDCRKR GAGAGVASAP TTSLLVPVAL PQQATSDEDR APRGRRLRLF GVDLELAANS
101: AFRFSYWSSS QSYVITKGWS SFVRDRRLAA GDTVSFCRAG ARLFIDCRKR GAGAGVASAP TTSLLVPVAL PQQATSDEDR APRGRRLRLF GVDLELAANS
001: MMTDLSLTRD EDEEEAKPLA EEEGAREVAD REHMFDKVVT PSDVGKLNRL VIPKQHAERF FPLDSSSNEK GLLLNFEDLT GKSWRFRYSY WNSSQSYVMT
101: KGWSRFVKDK KLDAGDIVSF QRCVGDSGRD SRLFIDWRRR PKVPDHPHFA AGAMFPRFYS FPSTNYSLYN HQQQRHHHSG GGYNYHQIPR EFGYGYFVRS
201: VDQRNNPAAA VADPLVIESV PVMMHGRANQ ELVGTAGKRL RLFGVDMECG ESGMTNSTEE ESSSSGGSLP RGGGGGASSS SFFQLRLGSS SEDDHFTKKG
301: KSSLSFDLDQ
101: KGWSRFVKDK KLDAGDIVSF QRCVGDSGRD SRLFIDWRRR PKVPDHPHFA AGAMFPRFYS FPSTNYSLYN HQQQRHHHSG GGYNYHQIPR EFGYGYFVRS
201: VDQRNNPAAA VADPLVIESV PVMMHGRANQ ELVGTAGKRL RLFGVDMECG ESGMTNSTEE ESSSSGGSLP RGGGGGASSS SFFQLRLGSS SEDDHFTKKG
301: KSSLSFDLDQ
Arabidopsis Description
NGA1B3 domain-containing transcription factor NGA1 [Source:UniProtKB/Swiss-Prot;Acc:O82799]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.