Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY58764 | Canola | nucleus | 98.74 | 98.12 |
| Bra014415.1-P | Field mustard | nucleus | 98.43 | 97.81 |
| CDY69432 | Canola | nucleus | 73.27 | 83.81 |
| CDX67872 | Canola | nucleus | 74.84 | 83.51 |
| CDX76605 | Canola | nucleus | 75.47 | 82.19 |
| CDY11388 | Canola | nucleus | 75.47 | 82.19 |
| AT3G61970.1 | Thale cress | nucleus | 75.47 | 80.27 |
| CDY48008 | Canola | nucleus | 58.49 | 61.18 |
| CDY27515 | Canola | nucleus | 58.18 | 60.86 |
| Zm00001d035982_P001 | Maize | nucleus | 16.67 | 60.23 |
| CDX83351 | Canola | nucleus | 57.86 | 59.74 |
| CDX80053 | Canola | nucleus | 55.66 | 59.6 |
| CDY50908 | Canola | nucleus | 58.8 | 59.37 |
| CDY41564 | Canola | nucleus | 55.35 | 59.26 |
| CDY67348 | Canola | nucleus | 22.64 | 48.0 |
| GSMUA_Achr4P26430_001 | Banana | nucleus | 33.02 | 42.0 |
| CDY43060 | Canola | cytosol | 21.38 | 41.72 |
| TraesCS7A01G020800.1 | Wheat | nucleus | 25.79 | 41.41 |
| Zm00001d048815_P001 | Maize | nucleus | 30.19 | 41.38 |
| TraesCS7A01G461000.1 | Wheat | nucleus | 25.16 | 41.03 |
| TraesCS7D01G448900.1 | Wheat | nucleus | 24.84 | 40.31 |
| Os06t0107800-02 | Rice | nucleus | 25.16 | 40.2 |
| TraesCS7B01G362500.1 | Wheat | nucleus | 24.53 | 39.8 |
| GSMUA_Achr4P30170_001 | Banana | nucleus | 31.13 | 39.76 |
| Zm00001d029749_P001 | Maize | nucleus | 33.96 | 39.56 |
| Os03t0120900-01 | Rice | nucleus | 38.68 | 39.55 |
| HORVU0Hr1G022200.1 | Barley | nucleus | 24.84 | 39.5 |
| TraesCS4B01G348500.1 | Wheat | nucleus | 39.62 | 39.5 |
| EER92015 | Sorghum | nucleus | 33.65 | 39.05 |
| Zm00001d010077_P001 | Maize | nucleus | 31.76 | 39.0 |
| CDX90001 | Canola | nucleus | 42.14 | 38.95 |
| GSMUA_Achr5P12850_001 | Banana | nucleus | 25.79 | 38.86 |
| TraesCS5A01G516600.1 | Wheat | nucleus | 38.68 | 38.8 |
| TraesCS4A01G472700.1 | Wheat | nucleus | 26.42 | 38.71 |
| TraesCS7D01G017000.1 | Wheat | nucleus | 26.42 | 38.71 |
| Zm00001d047359_P001 | Maize | nucleus | 33.65 | 38.63 |
| TraesCS7A01G020700.1 | Wheat | nucleus | 26.1 | 38.6 |
| CDY15208 | Canola | nucleus | 38.68 | 38.2 |
| HORVU7Hr1G002230.1 | Barley | nucleus | 26.42 | 38.18 |
| Zm00001d027409_P001 | Maize | nucleus | 38.99 | 37.92 |
| TraesCS1B01G215000.1 | Wheat | nucleus | 32.7 | 37.82 |
| TraesCS1A01G200500.1 | Wheat | nucleus | 33.02 | 37.77 |
| OQU93364 | Sorghum | nucleus | 38.68 | 37.27 |
| CDY43751 | Canola | nucleus | 27.99 | 36.63 |
| GSMUA_Achr4P24970_001 | Banana | nucleus | 27.04 | 36.6 |
| Os10t0537100-00 | Rice | nucleus | 35.85 | 36.54 |
| GSMUA_Achr1P03600_001 | Banana | nucleus | 37.74 | 36.36 |
| Zm00001d024103_P001 | Maize | nucleus | 25.47 | 36.16 |
| Zm00001d035903_P001 | Maize | nucleus | 25.47 | 36.16 |
| KXG19112 | Sorghum | nucleus | 23.27 | 36.1 |
| HORVU1Hr1G051780.2 | Barley | nucleus | 33.02 | 35.84 |
| CDX84162 | Canola | nucleus | 27.36 | 35.8 |
| TraesCS1D01G203900.1 | Wheat | nucleus | 32.7 | 35.74 |
| Os04t0581400-01 | Rice | nucleus | 32.7 | 35.49 |
| CDX75073 | Canola | nucleus | 27.67 | 35.48 |
| CDY08512 | Canola | nucleus | 27.67 | 35.48 |
| GSMUA_Achr7P04630_001 | Banana | nucleus | 22.96 | 35.44 |
| CDX73868 | Canola | nucleus | 26.1 | 35.17 |
| HORVU7Hr1G046950.1 | Barley | nucleus | 29.87 | 34.67 |
| CDY62470 | Canola | nucleus | 24.84 | 34.65 |
| HORVU4Hr1G084950.3 | Barley | nucleus | 37.11 | 34.6 |
| GSMUA_Achr4P12210_001 | Banana | nucleus | 23.58 | 33.48 |
| CDY01036 | Canola | nucleus | 27.04 | 33.46 |
| KXG19111 | Sorghum | nucleus | 24.84 | 33.19 |
| EES13386 | Sorghum | nucleus | 26.1 | 32.81 |
| GSMUA_AchrUn_... | Banana | cytosol | 24.84 | 32.78 |
| Zm00001d024545_P001 | Maize | nucleus | 25.47 | 32.53 |
| GSMUA_Achr5P10220_001 | Banana | nucleus | 27.67 | 32.35 |
| KRG97268 | Soybean | nucleus | 41.82 | 32.2 |
| KRH68988 | Soybean | nucleus | 42.45 | 32.14 |
| Os02t0683500-01 | Rice | nucleus | 41.51 | 32.04 |
| VIT_15s0048g02370.t01 | Wine grape | nucleus | 46.23 | 31.89 |
| CDY47260 | Canola | nucleus | 26.73 | 31.84 |
| GSMUA_Achr9P18780_001 | Banana | nucleus | 28.62 | 31.82 |
| HORVU6Hr1G066190.2 | Barley | nucleus | 40.57 | 31.54 |
| TraesCS6B01G286900.1 | Wheat | nucleus | 40.57 | 31.54 |
| Zm00001d002562_P001 | Maize | nucleus | 40.57 | 31.54 |
| TraesCS2A01G394700.1 | Wheat | nucleus | 39.62 | 31.19 |
| Zm00001d026005_P001 | Maize | nucleus | 39.31 | 30.94 |
| TraesCS6A01G259600.1 | Wheat | nucleus | 40.25 | 30.92 |
| TraesCS6D01G240600.1 | Wheat | nucleus | 40.25 | 30.92 |
| TraesCS2B01G412700.1 | Wheat | nucleus | 39.62 | 30.81 |
| TraesCS2D01G392400.1 | Wheat | nucleus | 39.62 | 30.81 |
| GSMUA_Achr5P20340_001 | Banana | nucleus | 32.39 | 30.56 |
| EES12712 | Sorghum | nucleus | 40.25 | 30.48 |
| Os08t0157700-00 | Rice | nucleus | 27.36 | 30.31 |
| GSMUA_Achr2P10230_001 | Banana | nucleus | 28.93 | 30.26 |
| GSMUA_Achr2P00400_001 | Banana | nucleus | 27.04 | 29.86 |
| VIT_02s0025g03000.t01 | Wine grape | nucleus | 41.2 | 28.73 |
| Zm00001d017618_P001 | Maize | nucleus | 38.05 | 28.67 |
| Zm00001d051471_P001 | Maize | nucleus | 37.74 | 28.57 |
| CDX97251 | Canola | nucleus | 30.19 | 28.32 |
| CDY07140 | Canola | nucleus | 27.04 | 28.1 |
| CDY49614 | Canola | nucleus | 27.36 | 28.06 |
| KRH47753 | Soybean | nucleus | 44.03 | 28.0 |
| CDX80996 | Canola | nucleus | 23.9 | 27.64 |
| EES07445 | Sorghum | nucleus | 37.42 | 27.42 |
| CDX81561 | Canola | nucleus | 28.3 | 26.24 |
| CDY45849 | Canola | nucleus, plastid | 28.62 | 26.0 |
| CDX97996 | Canola | nucleus | 25.79 | 25.23 |
| CDY58354 | Canola | nucleus | 25.79 | 25.15 |
| CDY72302 | Canola | nucleus | 25.79 | 25.15 |
| CDY24391 | Canola | nucleus | 26.73 | 25.15 |
| CDY61361 | Canola | nucleus | 25.79 | 25.08 |
| CDY36099 | Canola | nucleus | 27.04 | 24.57 |
| KRH06334 | Soybean | nucleus | 44.97 | 24.57 |
| CDY40973 | Canola | nucleus | 24.21 | 24.44 |
| CDX84999 | Canola | nucleus | 26.42 | 23.73 |
| CDY16133 | Canola | nucleus | 26.42 | 23.46 |
| CDX98911 | Canola | nucleus | 17.61 | 23.43 |
| CDY70080 | Canola | nucleus | 17.61 | 23.43 |
| CDX99755 | Canola | nucleus | 24.53 | 22.94 |
| CDX83547 | Canola | nucleus | 18.87 | 18.52 |
| CDY29599 | Canola | nucleus | 18.24 | 17.85 |
| CDY22814 | Canola | nucleus | 18.55 | 17.51 |
| CDY37109 | Canola | nucleus | 18.24 | 17.42 |
| CDY37130 | Canola | nucleus | 17.92 | 16.81 |
| CDY65812 | Canola | nucleus | 14.78 | 16.73 |
| CDY29620 | Canola | nucleus | 17.61 | 16.28 |
| CDY22826 | Canola | nucleus | 17.3 | 16.27 |
| CDY35575 | Canola | nucleus | 17.61 | 16.23 |
| CDY46564 | Canola | nucleus | 16.67 | 15.63 |
| CDY51249 | Canola | nucleus | 16.67 | 15.63 |
| CDY22801 | Canola | nucleus | 16.98 | 15.52 |
| CDY25209 | Canola | nucleus | 16.98 | 15.21 |
| CDY37108 | Canola | nucleus, plastid | 16.35 | 15.16 |
Protein Annotations
| MapMan:15.5.5.3 | Gene3D:2.40.330.10 | GO:A0A078J6T8 | UniProt:A0A078J6T8 | InterPro:B3_DNA-bd | EnsemblPlants:CDY58763 |
| ProteinID:CDY58763 | ProteinID:CDY58763.1 | ncoils:Coil | InterPro:DNA-bd_pseudobarrel_sf | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00025123001 | InterPro:IPR003340 | InterPro:IPR015300 | PFAM:PF02362 | PFscan:PS50863 |
| PANTHER:PTHR31140 | PANTHER:PTHR31140:SF4 | SMART:SM01019 | SUPFAM:SSF101936 | UniParc:UPI0004EE70F9 | SEG:seg |
Description
BnaA04g27470DBnaA04g27470D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J6T8]
Coordinates
chrLK033697:-:32544..33583
Molecular Weight (calculated)
36201.7 Da
IEP (calculated)
9.308
GRAVY (calculated)
-0.731
Length
318 amino acids
Sequence
(BLAST)
(BLAST)
001: MERKSNDLER SENIDSQNKK MNLEEERPVQ EASSMEREHM FDKVVTPSDV GKLNRLVIPK QHAERYFPLD NNSSDNNKGL LLNFEDRIGI LWSFRYSYWN
101: SSQSYVMTKG WSRFVKDKKL DAGDIVSFHR GSCNKDKLFI DWKRRPKIPD HQVVGAMFPR FYSYPYPQIQ ASYERHNLYH RYQRDIGIGY YVRSMERYDP
201: TAVIESVPVI MQRRAHVATM ASSRGEKRLR LFGVDMECGR GGRGGGASVN STEEESSTSG GSISRGGVSM AGVGSLLQLR LVSSDGDDQS LVAMGAANED
301: HHLFTKKGKS SLSFDLDK
101: SSQSYVMTKG WSRFVKDKKL DAGDIVSFHR GSCNKDKLFI DWKRRPKIPD HQVVGAMFPR FYSYPYPQIQ ASYERHNLYH RYQRDIGIGY YVRSMERYDP
201: TAVIESVPVI MQRRAHVATM ASSRGEKRLR LFGVDMECGR GGRGGGASVN STEEESSTSG GSISRGGVSM AGVGSLLQLR LVSSDGDDQS LVAMGAANED
301: HHLFTKKGKS SLSFDLDK
001: MNQEDKEKPI EEASSSMERE HMFDKVVTPS DVGKLNRLVI PKQHAERYFP LDNSTTNDSN KGLLLNFEDR SGNSWRFRYS YWNSSQSYVM TKGWSRFVKD
101: KKLDAGDIVS FQRDSCNKDK LYIDWRRRPK IPDHHHQQFA GAMFPRFYTF PHPQMPTNYE THNLYHRFHQ RDLGIGYYVR SMERSHPTAV IESVPVMMQR
201: RAQVASMASR GEKRLRLFGV DMECGGGGGS VNSTEEESSS SGGSIPRGRV SMVGAGSLLQ LRLVSSDDES LVAMEAASLE DHHFFTKKGK PSLSFDLDR
101: KKLDAGDIVS FQRDSCNKDK LYIDWRRRPK IPDHHHQQFA GAMFPRFYTF PHPQMPTNYE THNLYHRFHQ RDLGIGYYVR SMERSHPTAV IESVPVMMQR
201: RAQVASMASR GEKRLRLFGV DMECGGGGGS VNSTEEESSS SGGSIPRGRV SMVGAGSLLQ LRLVSSDDES LVAMEAASLE DHHFFTKKGK PSLSFDLDR
Arabidopsis Description
NGA2NGA2 [Source:UniProtKB/TrEMBL;Acc:A0A178V7R1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.