Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d010077_P001 | Maize | nucleus | 77.59 | 69.5 |
| Zm00001d035982_P001 | Maize | nucleus | 25.43 | 67.05 |
| Zm00001d027409_P001 | Maize | nucleus | 73.71 | 52.29 |
| OQU93364 | Sorghum | nucleus | 71.55 | 50.3 |
| CDY67348 | Canola | nucleus | 29.74 | 46.0 |
| Os03t0120900-01 | Rice | nucleus | 61.21 | 45.66 |
| HORVU7Hr1G046950.1 | Barley | nucleus | 51.29 | 43.43 |
| Zm00001d047359_P001 | Maize | nucleus | 50.86 | 42.6 |
| TraesCS5A01G516600.1 | Wheat | nucleus | 58.19 | 42.59 |
| GSMUA_Achr4P26430_001 | Banana | nucleus | 45.69 | 42.4 |
| Zm00001d029749_P001 | Maize | nucleus | 49.57 | 42.12 |
| TraesCS4B01G348500.1 | Wheat | nucleus | 56.47 | 41.07 |
| CDY43060 | Canola | cytosol | 27.59 | 39.26 |
| HORVU4Hr1G084950.3 | Barley | nucleus | 57.33 | 39.0 |
| GSMUA_Achr4P30170_001 | Banana | nucleus | 41.38 | 38.55 |
| GSMUA_Achr5P12850_001 | Banana | nucleus | 31.47 | 34.6 |
| Bra040478.1-P | Field mustard | nucleus | 43.53 | 34.47 |
| Zm00001d035903_P001 | Maize | nucleus | 33.19 | 34.38 |
| Solyc08g013700.1.1 | Tomato | nucleus | 43.1 | 34.01 |
| CDY69432 | Canola | nucleus | 40.52 | 33.81 |
| CDX80053 | Canola | nucleus | 42.67 | 33.33 |
| Bra004501.1-P | Field mustard | nucleus | 42.67 | 33.33 |
| CDY41564 | Canola | nucleus | 42.67 | 33.33 |
| CDY48008 | Canola | nucleus | 43.53 | 33.22 |
| Zm00001d024103_P001 | Maize | nucleus | 31.9 | 33.04 |
| CDY27515 | Canola | nucleus | 43.1 | 32.89 |
| PGSC0003DMT400015010 | Potato | nucleus | 42.24 | 32.67 |
| CDX67872 | Canola | nucleus | 40.09 | 32.63 |
| Bra003482.1-P | Field mustard | nucleus | 40.09 | 32.52 |
| GSMUA_Achr1P03600_001 | Banana | nucleus | 45.69 | 32.12 |
| CDY50908 | Canola | nucleus | 43.53 | 32.06 |
| PGSC0003DMT400015011 | Potato | nucleus | 43.1 | 31.95 |
| Bra000434.1-P | Field mustard | nucleus | 42.67 | 31.94 |
| CDX83351 | Canola | nucleus | 42.24 | 31.82 |
| Solyc08g013690.1.1 | Tomato | nucleus | 44.4 | 31.79 |
| GSMUA_Achr4P24970_001 | Banana | nucleus | 31.9 | 31.49 |
| AT2G46870.1 | Thale cress | nucleus | 41.81 | 31.29 |
| CDX76605 | Canola | nucleus | 39.22 | 31.16 |
| Bra007646.1-P | Field mustard | nucleus | 39.22 | 31.16 |
| CDY11388 | Canola | nucleus | 39.22 | 31.16 |
| Solyc08g083400.2.1 | Tomato | nucleus | 44.83 | 31.14 |
| AT3G61970.1 | Thale cress | nucleus | 40.09 | 31.1 |
| CDY15208 | Canola | nucleus | 43.1 | 31.06 |
| Zm00001d026005_P001 | Maize | nucleus | 53.88 | 30.94 |
| Zm00001d023446_P001 | Maize | nucleus | 37.07 | 30.39 |
| CDY58763 | Canola | nucleus | 41.38 | 30.19 |
| CDY58764 | Canola | nucleus | 41.38 | 30.0 |
| Bra014415.1-P | Field mustard | nucleus | 41.38 | 30.0 |
| Zm00001d002562_P001 | Maize | nucleus | 52.59 | 29.83 |
| Zm00001d024545_P001 | Maize | nucleus | 31.47 | 29.32 |
| CDX90001 | Canola | nucleus | 43.1 | 29.07 |
| Bra033294.1-P | Field mustard | nucleus | 42.24 | 28.49 |
| GSMUA_Achr2P00400_001 | Banana | nucleus | 35.34 | 28.47 |
| Zm00001d017618_P001 | Maize | nucleus | 51.72 | 28.44 |
| AT1G01030.1 | Thale cress | nucleus | 43.53 | 28.21 |
| GSMUA_Achr5P20340_001 | Banana | nucleus | 40.52 | 27.89 |
| GSMUA_Achr2P10230_001 | Banana | nucleus | 36.21 | 27.63 |
| GSMUA_Achr5P10220_001 | Banana | nucleus | 31.9 | 27.21 |
| Bra030497.1-P | Field mustard | nucleus | 41.38 | 27.12 |
| GSMUA_Achr9P18780_001 | Banana | nucleus | 33.19 | 26.92 |
| Zm00001d051471_P001 | Maize | nucleus | 48.71 | 26.9 |
| PGSC0003DMT400031863 | Potato | nucleus | 46.55 | 26.6 |
| Zm00001d052591_P001 | Maize | nucleus | 34.91 | 26.38 |
| Zm00001d024354_P001 | Maize | nucleus, plastid | 31.03 | 25.26 |
| KRH68988 | Soybean | nucleus | 45.26 | 25.0 |
| AT4G01500.1 | Thale cress | nucleus | 35.78 | 24.92 |
| CDX97251 | Canola | nucleus | 35.78 | 24.48 |
| Bra008552.1-P | Field mustard | nucleus | 35.34 | 24.26 |
| KRG97268 | Soybean | nucleus | 43.1 | 24.21 |
| Zm00001d009468_P001 | Maize | nucleus, plastid | 38.79 | 24.0 |
| CDY07140 | Canola | nucleus | 31.03 | 23.53 |
| Zm00001d043782_P001 | Maize | nucleus | 39.22 | 23.39 |
| VIT_02s0025g03000.t01 | Wine grape | nucleus | 45.69 | 23.25 |
| CDY49614 | Canola | nucleus | 31.03 | 23.23 |
| Bra037417.1-P | Field mustard | nucleus | 31.03 | 23.23 |
| Zm00001d038907_P001 | Maize | nucleus, plastid | 40.52 | 23.15 |
| VIT_15s0048g02370.t01 | Wine grape | nucleus | 45.26 | 22.78 |
| Zm00001d011639_P001 | Maize | nucleus | 38.79 | 22.22 |
| KRH47753 | Soybean | nucleus | 47.41 | 22.0 |
| Zm00001d039907_P001 | Maize | nucleus | 35.78 | 21.96 |
| KRH06334 | Soybean | nucleus | 47.41 | 18.9 |
Protein Annotations
| MapMan:15.5.5.3 | Gene3D:2.40.330.10 | UniProt:A0A1D6PQ80 | ProteinID:AQK48948.1 | InterPro:B3_DNA-bd | InterPro:DNA-bd_pseudobarrel_sf |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR003340 | InterPro:IPR015300 | PFAM:PF02362 |
| PFscan:PS50863 | PANTHER:PTHR31140 | PANTHER:PTHR31140:SF4 | SMART:SM01019 | SUPFAM:SSF101936 | UniParc:UPI000842564F |
| EnsemblPlantsGene:Zm00001d048815 | EnsemblPlants:Zm00001d048815_P001 | EnsemblPlants:Zm00001d048815_T001 | SEG:seg | : | : |
Description
B3 domain-containing transcription factor NGA2
Coordinates
chr4:-:5918117..5918815
Molecular Weight (calculated)
26327.7 Da
IEP (calculated)
6.748
GRAVY (calculated)
-0.764
Length
232 amino acids
Sequence
(BLAST)
(BLAST)
001: MEFTTPPPAT RSGGGEERAA AEHNQHHQQQ HATVEKEHMF DKVVTPSDVG KLNRLVIPKQ HAEKYFPLDA AANEKGLLLS FEDRTGKPWR YRYSYWNSSQ
101: SYVMTKGWSR FVKEKRLDAG DTDSFGRGIS EAARGRLFID WRCRPDPPVV HHQYHHRLPL PSAVVPYAPF LEKDVALDPT NRSHGERPTF LEKDVALDAA
201: RVAAEGAGSD LEVDDDLDRR WEGRISELAS LI
101: SYVMTKGWSR FVKEKRLDAG DTDSFGRGIS EAARGRLFID WRCRPDPPVV HHQYHHRLPL PSAVVPYAPF LEKDVALDPT NRSHGERPTF LEKDVALDAA
201: RVAAEGAGSD LEVDDDLDRR WEGRISELAS LI
001: MDLSLAPTTT TSSDQEQDRD QELTSNIGAS SSSGPSGNNN NLPMMMIPPP EKEHMFDKVV TPSDVGKLNR LVIPKQHAER YFPLDSSNNQ NGTLLNFQDR
101: NGKMWRFRYS YWNSSQSYVM TKGWSRFVKE KKLDAGDIVS FQRGIGDESE RSKLYIDWRH RPDMSLVQAH QFEYNSVPIH RGLNIGNHQR SYYNTQRQEF
201: VGYGYGNLAG RCYYTGSPLD HRNIVGSEPL VIDSVPVVPG RLTPVMLPPL PPPPSTAGKR LRLFGVNMEC GNDYNQQEES WLVPRGEIGA SSSSSSALRL
301: NLSTDHDDDN DDGDDGDDDQ FAKKGKSSLS LNFNP
101: NGKMWRFRYS YWNSSQSYVM TKGWSRFVKE KKLDAGDIVS FQRGIGDESE RSKLYIDWRH RPDMSLVQAH QFEYNSVPIH RGLNIGNHQR SYYNTQRQEF
201: VGYGYGNLAG RCYYTGSPLD HRNIVGSEPL VIDSVPVVPG RLTPVMLPPL PPPPSTAGKR LRLFGVNMEC GNDYNQQEES WLVPRGEIGA SSSSSSALRL
301: NLSTDHDDDN DDGDDGDDDQ FAKKGKSSLS LNFNP
Arabidopsis Description
NGA3NGA3 [Source:UniProtKB/TrEMBL;Acc:A0A178W3T3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.