Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
21132161
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH68988 | Soybean | nucleus | 89.1 | 87.62 |
| Zm00001d035982_P001 | Maize | nucleus | 14.53 | 68.18 |
| Bra004501.1-P | Field mustard | nucleus | 35.35 | 49.16 |
| CDX80053 | Canola | nucleus | 35.35 | 49.16 |
| CDY41564 | Canola | nucleus | 35.11 | 48.82 |
| Bra040478.1-P | Field mustard | nucleus | 34.14 | 48.12 |
| CDY48008 | Canola | nucleus | 34.87 | 47.37 |
| CDY27515 | Canola | nucleus | 34.62 | 47.04 |
| GSMUA_Achr4P30170_001 | Banana | nucleus | 28.33 | 46.99 |
| AT2G46870.1 | Thale cress | nucleus | 35.11 | 46.77 |
| CDY50908 | Canola | nucleus | 35.59 | 46.67 |
| CDX83351 | Canola | nucleus | 34.62 | 46.43 |
| GSMUA_Achr4P26430_001 | Banana | nucleus | 28.09 | 46.4 |
| CDX76605 | Canola | nucleus | 32.45 | 45.89 |
| CDY11388 | Canola | nucleus | 32.45 | 45.89 |
| Bra000434.1-P | Field mustard | nucleus | 34.38 | 45.81 |
| Bra003482.1-P | Field mustard | nucleus | 31.72 | 45.8 |
| CDX67872 | Canola | nucleus | 31.48 | 45.61 |
| Bra007646.1-P | Field mustard | nucleus | 32.2 | 45.55 |
| AT3G61970.1 | Thale cress | nucleus | 32.45 | 44.82 |
| Os06t0107800-02 | Rice | nucleus | 21.55 | 44.72 |
| Zm00001d029749_P001 | Maize | nucleus | 29.54 | 44.69 |
| CDY69432 | Canola | nucleus | 30.02 | 44.6 |
| KRH47753 | Soybean | nucleus | 54.0 | 44.6 |
| EER92015 | Sorghum | nucleus | 29.54 | 44.53 |
| Solyc08g013700.1.1 | Tomato | nucleus | 31.48 | 44.22 |
| Zm00001d047359_P001 | Maize | nucleus | 29.3 | 43.68 |
| GSMUA_Achr5P12850_001 | Banana | nucleus | 22.03 | 43.13 |
| Zm00001d048815_P001 | Maize | nucleus | 24.21 | 43.1 |
| PGSC0003DMT400015010 | Potato | nucleus | 31.23 | 43.0 |
| TraesCS7A01G020800.1 | Wheat | nucleus | 20.58 | 42.93 |
| Zm00001d010077_P001 | Maize | nucleus | 26.88 | 42.86 |
| TraesCS7A01G461000.1 | Wheat | nucleus | 20.1 | 42.56 |
| HORVU0Hr1G022200.1 | Barley | nucleus | 20.58 | 42.5 |
| Os03t0120900-01 | Rice | nucleus | 31.96 | 42.44 |
| TraesCS1A01G200500.1 | Wheat | nucleus | 28.33 | 42.09 |
| PGSC0003DMT400015011 | Potato | nucleus | 31.72 | 41.85 |
| TraesCS7B01G362500.1 | Wheat | nucleus | 19.85 | 41.84 |
| TraesCS7D01G448900.1 | Wheat | nucleus | 19.85 | 41.84 |
| CDY58763 | Canola | nucleus | 32.2 | 41.82 |
| TraesCS1B01G215000.1 | Wheat | nucleus | 27.84 | 41.82 |
| Bra014415.1-P | Field mustard | nucleus | 32.2 | 41.56 |
| CDY58764 | Canola | nucleus | 32.2 | 41.56 |
| Solyc08g013690.1.1 | Tomato | nucleus | 32.45 | 41.36 |
| Os10t0537100-00 | Rice | nucleus | 31.23 | 41.35 |
| TraesCS4B01G348500.1 | Wheat | nucleus | 31.72 | 41.07 |
| TraesCS5A01G516600.1 | Wheat | nucleus | 31.48 | 41.01 |
| Os04t0581400-01 | Rice | nucleus | 28.81 | 40.61 |
| OQU93364 | Sorghum | nucleus | 32.45 | 40.61 |
| TraesCS1D01G203900.1 | Wheat | nucleus | 28.33 | 40.21 |
| GSMUA_Achr1P03600_001 | Banana | nucleus | 31.96 | 40.0 |
| Zm00001d035903_P001 | Maize | nucleus | 21.55 | 39.73 |
| TraesCS4A01G472700.1 | Wheat | nucleus | 20.82 | 39.63 |
| HORVU1Hr1G051780.2 | Barley | nucleus | 28.09 | 39.59 |
| TraesCS7A01G020700.1 | Wheat | nucleus | 20.58 | 39.53 |
| Os02t0683500-01 | Rice | nucleus | 39.23 | 39.32 |
| Zm00001d024103_P001 | Maize | nucleus | 21.31 | 39.29 |
| KXG19112 | Sorghum | nucleus | 19.37 | 39.02 |
| KRH06334 | Soybean | nucleus | 54.96 | 39.0 |
| Zm00001d027409_P001 | Maize | nucleus | 30.75 | 38.84 |
| GSMUA_Achr4P24970_001 | Banana | nucleus | 22.03 | 38.72 |
| TraesCS7D01G017000.1 | Wheat | nucleus | 20.34 | 38.71 |
| TraesCS6A01G259600.1 | Wheat | nucleus | 38.26 | 38.16 |
| TraesCS6B01G286900.1 | Wheat | nucleus | 37.77 | 38.14 |
| Zm00001d002562_P001 | Maize | nucleus | 37.77 | 38.14 |
| HORVU4Hr1G084950.3 | Barley | nucleus | 31.48 | 38.12 |
| TraesCS6D01G240600.1 | Wheat | nucleus | 38.01 | 37.92 |
| HORVU7Hr1G002230.1 | Barley | nucleus | 20.1 | 37.73 |
| Solyc08g083400.2.1 | Tomato | nucleus | 30.51 | 37.72 |
| HORVU6Hr1G066190.2 | Barley | nucleus | 37.29 | 37.65 |
| HORVU7Hr1G046950.1 | Barley | nucleus | 24.94 | 37.59 |
| TraesCS2A01G394700.1 | Wheat | nucleus | 36.08 | 36.88 |
| Zm00001d026005_P001 | Maize | nucleus | 35.84 | 36.63 |
| KRH67965 | Soybean | nucleus | 25.42 | 36.46 |
| TraesCS2B01G412700.1 | Wheat | nucleus | 36.08 | 36.43 |
| EES12712 | Sorghum | nucleus | 36.8 | 36.19 |
| TraesCS2D01G392400.1 | Wheat | nucleus | 35.84 | 36.19 |
| KXG19111 | Sorghum | nucleus | 20.82 | 36.13 |
| GSMUA_Achr7P04630_001 | Banana | nucleus | 17.92 | 35.92 |
| GSMUA_Achr2P10230_001 | Banana | nucleus | 26.15 | 35.53 |
| PGSC0003DMT400031863 | Potato | nucleus | 34.87 | 35.47 |
| KRG96220 | Soybean | nucleus | 25.67 | 35.45 |
| GSMUA_Achr2P00400_001 | Banana | nucleus | 24.7 | 35.42 |
| GSMUA_Achr5P10220_001 | Banana | nucleus | 23.24 | 35.29 |
| GSMUA_Achr9P18780_001 | Banana | nucleus | 24.21 | 34.97 |
| Zm00001d017618_P001 | Maize | nucleus | 35.59 | 34.83 |
| Zm00001d051471_P001 | Maize | nucleus | 35.35 | 34.76 |
| GSMUA_AchrUn_... | Banana | cytosol | 20.1 | 34.44 |
| EES13386 | Sorghum | nucleus | 21.07 | 34.39 |
| EES07445 | Sorghum | nucleus | 36.08 | 34.33 |
| Zm00001d024545_P001 | Maize | nucleus | 20.34 | 33.73 |
| KRH32791 | Soybean | nucleus | 27.36 | 33.53 |
| GSMUA_Achr4P12210_001 | Banana | nucleus | 18.16 | 33.48 |
| Os08t0157700-00 | Rice | nucleus | 23.24 | 33.45 |
| VIT_02s0025g03000.t01 | Wine grape | nucleus | 36.56 | 33.11 |
| KRH72242 | Soybean | nucleus | 27.12 | 32.56 |
| GSMUA_Achr5P20340_001 | Banana | nucleus | 25.67 | 31.45 |
| KRH34761 | Soybean | nucleus | 23.24 | 27.35 |
| KRG92025 | Soybean | nucleus | 23.0 | 26.24 |
| KRH75484 | Soybean | nucleus | 23.49 | 25.26 |
| KRH70603 | Soybean | nucleus | 23.73 | 24.44 |
| KRG93082 | Soybean | nucleus | 15.74 | 20.38 |
Protein Annotations
| EntrezGene:100812161 | MapMan:15.5.5.3 | Gene3D:2.40.330.10 | EMBL:ACUP02012181 | InterPro:B3_DNA-bd | InterPro:DNA-bd_pseudobarrel_sf |
| EnsemblPlantsGene:GLYMA_19G261300 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | UniProt:I1NCS4 | InterPro:IPR003340 |
| InterPro:IPR015300 | EnsemblPlants:KRG97268 | ProteinID:KRG97268 | ProteinID:KRG97268.1 | ProteinID:KRG97269.1 | ProteinID:KRG97270.1 |
| ProteinID:KRG97271.1 | ProteinID:KRG97272.1 | PFAM:PF02362 | PFscan:PS50863 | PANTHER:PTHR31140 | PANTHER:PTHR31140:SF4 |
| SMART:SM01019 | SUPFAM:SSF101936 | UniParc:UPI000233EE91 | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr19:+:50456680..50462402
Molecular Weight (calculated)
45905.5 Da
IEP (calculated)
8.103
GRAVY (calculated)
-0.726
Length
413 amino acids
Sequence
(BLAST)
(BLAST)
001: MELMQQVKGN YSDSREEEEA AAEIITITRE PESSRLHQQD AASNFGKKLD LMDLSLGSSK EEEEGKLQQG GGGGGVVHHA HEIVEKENMF EKVVTPSDVG
101: KLNRLVIPKQ HAEKYFPLDS SSNEKGLLLN FEDRNGKVWR FRYSYWNSSQ SYVMTKGWSR FVKEKKLDAG DIVSFQRGLG DLYRHRLYID WRKRSAHPHA
201: HHHAPDPLFL PSIRWYSLPP TMPPRYHHDH HFHHHLNYNN LFTFQQHQYQ LGAATAAATA AHHGDQNSGS GSLYYLRSSM SMGGGDQNLQ GRGNNIVPMI
301: IDSVPVSVGH HNNRHGNGGI TSGGATSSGK RLRLFGVNME CASSAEDSKG LSSGSAAHVT TAASSSLHQR LRLPLPHEDP LSSSSARFGD HKGGSTGTSL
401: LFDLDPSLQY HRQ
101: KLNRLVIPKQ HAEKYFPLDS SSNEKGLLLN FEDRNGKVWR FRYSYWNSSQ SYVMTKGWSR FVKEKKLDAG DIVSFQRGLG DLYRHRLYID WRKRSAHPHA
201: HHHAPDPLFL PSIRWYSLPP TMPPRYHHDH HFHHHLNYNN LFTFQQHQYQ LGAATAAATA AHHGDQNSGS GSLYYLRSSM SMGGGDQNLQ GRGNNIVPMI
301: IDSVPVSVGH HNNRHGNGGI TSGGATSSGK RLRLFGVNME CASSAEDSKG LSSGSAAHVT TAASSSLHQR LRLPLPHEDP LSSSSARFGD HKGGSTGTSL
401: LFDLDPSLQY HRQ
001: MMTDLSLTRD EDEEEAKPLA EEEGAREVAD REHMFDKVVT PSDVGKLNRL VIPKQHAERF FPLDSSSNEK GLLLNFEDLT GKSWRFRYSY WNSSQSYVMT
101: KGWSRFVKDK KLDAGDIVSF QRCVGDSGRD SRLFIDWRRR PKVPDHPHFA AGAMFPRFYS FPSTNYSLYN HQQQRHHHSG GGYNYHQIPR EFGYGYFVRS
201: VDQRNNPAAA VADPLVIESV PVMMHGRANQ ELVGTAGKRL RLFGVDMECG ESGMTNSTEE ESSSSGGSLP RGGGGGASSS SFFQLRLGSS SEDDHFTKKG
301: KSSLSFDLDQ
101: KGWSRFVKDK KLDAGDIVSF QRCVGDSGRD SRLFIDWRRR PKVPDHPHFA AGAMFPRFYS FPSTNYSLYN HQQQRHHHSG GGYNYHQIPR EFGYGYFVRS
201: VDQRNNPAAA VADPLVIESV PVMMHGRANQ ELVGTAGKRL RLFGVDMECG ESGMTNSTEE ESSSSGGSLP RGGGGGASSS SFFQLRLGSS SEDDHFTKKG
301: KSSLSFDLDQ
Arabidopsis Description
NGA1B3 domain-containing transcription factor NGA1 [Source:UniProtKB/Swiss-Prot;Acc:O82799]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.