Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr4P30170_001 | Banana | nucleus | 63.6 | 63.86 |
| Zm00001d035982_P001 | Maize | nucleus | 21.2 | 60.23 |
| GSMUA_Achr5P12850_001 | Banana | nucleus | 50.8 | 60.19 |
| GSMUA_Achr4P24970_001 | Banana | nucleus | 45.2 | 48.09 |
| Zm00001d048815_P001 | Maize | nucleus | 42.4 | 45.69 |
| GSMUA_Achr2P10230_001 | Banana | nucleus | 52.8 | 43.42 |
| Zm00001d010077_P001 | Maize | nucleus | 44.8 | 43.24 |
| CDY67348 | Canola | nucleus | 25.6 | 42.67 |
| GSMUA_Achr5P10220_001 | Banana | nucleus | 46.4 | 42.65 |
| GSMUA_Achr1P03600_001 | Banana | nucleus | 55.6 | 42.12 |
| GSMUA_Achr3P19210_001 | Banana | nucleus | 33.6 | 41.79 |
| GSMUA_Achr9P02600_001 | Banana | nucleus | 32.0 | 41.45 |
| GSMUA_Achr9P18780_001 | Banana | nucleus | 47.2 | 41.26 |
| EER92015 | Sorghum | nucleus | 45.2 | 41.24 |
| Zm00001d029749_P001 | Maize | nucleus | 44.8 | 41.03 |
| Zm00001d047359_P001 | Maize | nucleus | 45.2 | 40.79 |
| GSMUA_Achr2P00400_001 | Banana | nucleus | 45.6 | 39.58 |
| Os03t0120900-01 | Rice | nucleus | 48.4 | 38.91 |
| TraesCS1B01G215000.1 | Wheat | nucleus | 42.4 | 38.55 |
| TraesCS1A01G200500.1 | Wheat | nucleus | 42.8 | 38.49 |
| Os04t0581400-01 | Rice | nucleus | 44.4 | 37.88 |
| TraesCS5A01G516600.1 | Wheat | nucleus | 48.0 | 37.85 |
| CDY43060 | Canola | cytosol | 24.4 | 37.42 |
| Solyc08g013700.1.1 | Tomato | nucleus | 44.0 | 37.41 |
| OQU93364 | Sorghum | nucleus | 49.2 | 37.27 |
| Zm00001d027409_P001 | Maize | nucleus | 48.4 | 37.0 |
| TraesCS4B01G348500.1 | Wheat | nucleus | 47.2 | 36.99 |
| Os10t0537100-00 | Rice | nucleus | 46.0 | 36.86 |
| PGSC0003DMT400015010 | Potato | nucleus | 44.0 | 36.67 |
| HORVU1Hr1G051780.2 | Barley | nucleus | 42.8 | 36.52 |
| TraesCS1D01G203900.1 | Wheat | nucleus | 42.4 | 36.43 |
| GSMUA_Achr6P35600_001 | Banana | nucleus | 35.2 | 36.36 |
| GSMUA_Achr7P04630_001 | Banana | nucleus | 29.6 | 35.92 |
| Bra040478.1-P | Field mustard | nucleus | 42.0 | 35.84 |
| HORVU4Hr1G084950.3 | Barley | nucleus | 48.4 | 35.48 |
| PGSC0003DMT400015011 | Potato | nucleus | 44.4 | 35.46 |
| CDY48008 | Canola | nucleus | 42.8 | 35.2 |
| Bra004501.1-P | Field mustard | nucleus | 41.6 | 35.02 |
| CDX80053 | Canola | nucleus | 41.6 | 35.02 |
| CDY41564 | Canola | nucleus | 41.6 | 35.02 |
| Bra007646.1-P | Field mustard | nucleus | 40.8 | 34.93 |
| CDX76605 | Canola | nucleus | 40.8 | 34.93 |
| CDY11388 | Canola | nucleus | 40.8 | 34.93 |
| CDY69432 | Canola | nucleus | 38.8 | 34.89 |
| Solyc08g013690.1.1 | Tomato | nucleus | 45.2 | 34.88 |
| CDY27515 | Canola | nucleus | 42.4 | 34.87 |
| AT2G46870.1 | Thale cress | nucleus | 43.2 | 34.84 |
| GSMUA_Achr6P13140_001 | Banana | nucleus | 34.4 | 34.82 |
| CDX67872 | Canola | nucleus | 39.6 | 34.74 |
| HORVU7Hr1G046950.1 | Barley | nucleus | 38.0 | 34.67 |
| Bra003482.1-P | Field mustard | nucleus | 39.6 | 34.62 |
| GSMUA_Achr9P08980_001 | Banana | nucleus | 22.4 | 34.57 |
| Bra000434.1-P | Field mustard | nucleus | 42.8 | 34.52 |
| CDX83351 | Canola | nucleus | 42.4 | 34.42 |
| CDY50908 | Canola | nucleus | 43.2 | 34.29 |
| GSMUA_AchrUn_... | Banana | cytosol | 32.8 | 34.02 |
| CDY15208 | Canola | nucleus | 43.2 | 33.54 |
| AT3G61970.1 | Thale cress | nucleus | 40.0 | 33.44 |
| CDX90001 | Canola | nucleus | 46.0 | 33.43 |
| CDY58763 | Canola | nucleus | 42.0 | 33.02 |
| GSMUA_Achr11P... | Banana | nucleus | 24.4 | 32.97 |
| Bra033294.1-P | Field mustard | nucleus | 45.2 | 32.85 |
| Bra014415.1-P | Field mustard | nucleus | 42.0 | 32.81 |
| CDY58764 | Canola | nucleus | 42.0 | 32.81 |
| Solyc08g083400.2.1 | Tomato | nucleus | 43.6 | 32.63 |
| EES12712 | Sorghum | nucleus | 54.4 | 32.38 |
| GSMUA_Achr5P20340_001 | Banana | nucleus | 43.6 | 32.34 |
| Os02t0683500-01 | Rice | nucleus | 53.2 | 32.28 |
| TraesCS2B01G412700.1 | Wheat | nucleus | 52.8 | 32.27 |
| TraesCS2D01G392400.1 | Wheat | nucleus | 52.8 | 32.27 |
| Zm00001d002562_P001 | Maize | nucleus | 52.8 | 32.27 |
| Bra030497.1-P | Field mustard | nucleus | 45.6 | 32.2 |
| TraesCS2A01G394700.1 | Wheat | nucleus | 52.0 | 32.18 |
| TraesCS6B01G286900.1 | Wheat | nucleus | 52.4 | 32.03 |
| AT1G01030.1 | Thale cress | nucleus | 45.6 | 31.84 |
| HORVU6Hr1G066190.2 | Barley | nucleus | 52.0 | 31.78 |
| Zm00001d026005_P001 | Maize | nucleus | 51.2 | 31.68 |
| TraesCS6A01G259600.1 | Wheat | nucleus | 52.4 | 31.64 |
| TraesCS6D01G240600.1 | Wheat | nucleus | 52.4 | 31.64 |
| GSMUA_Achr4P12210_001 | Banana | nucleus | 27.6 | 30.8 |
| GSMUA_Achr1P21250_001 | Banana | nucleus | 36.0 | 30.61 |
| Zm00001d051471_P001 | Maize | nucleus | 51.2 | 30.48 |
| PGSC0003DMT400031863 | Potato | nucleus | 49.2 | 30.3 |
| GSMUA_Achr1P05400_001 | Banana | nucleus | 35.6 | 29.87 |
| Zm00001d017618_P001 | Maize | nucleus | 50.0 | 29.62 |
| GSMUA_Achr5P09950_001 | Banana | nucleus | 37.6 | 29.19 |
| EES07445 | Sorghum | nucleus | 49.6 | 28.57 |
| KRH68988 | Soybean | nucleus | 48.0 | 28.57 |
| KRG97268 | Soybean | nucleus | 46.4 | 28.09 |
| VIT_02s0025g03000.t01 | Wine grape | nucleus | 50.8 | 27.85 |
| GSMUA_Achr6P01420_001 | Banana | nucleus | 35.2 | 27.85 |
| GSMUA_Achr2P22560_001 | Banana | nucleus | 33.6 | 27.1 |
| VIT_15s0048g02370.t01 | Wine grape | nucleus | 48.4 | 26.25 |
| AT4G01500.1 | Thale cress | nucleus | 34.4 | 25.83 |
| KRH47753 | Soybean | nucleus | 50.4 | 25.2 |
| CDY07140 | Canola | nucleus | 30.4 | 24.84 |
| Bra037417.1-P | Field mustard | nucleus | 30.4 | 24.52 |
| CDY49614 | Canola | nucleus | 30.4 | 24.52 |
| CDX97251 | Canola | nucleus | 33.2 | 24.48 |
| GSMUA_AchrUn_... | Banana | nucleus | 36.4 | 24.33 |
| Bra008552.1-P | Field mustard | nucleus | 32.8 | 24.26 |
| GSMUA_Achr6P09880_001 | Banana | nucleus | 27.2 | 23.53 |
| GSMUA_Achr4P06710_001 | Banana | nucleus | 31.6 | 22.57 |
| KRH06334 | Soybean | nucleus | 52.4 | 22.51 |
| GSMUA_Achr10P... | Banana | nucleus | 25.6 | 21.92 |
| GSMUA_Achr9P21470_001 | Banana | nucleus | 26.0 | 20.97 |
| GSMUA_Achr3P21100_001 | Banana | nucleus | 34.0 | 20.63 |
| GSMUA_Achr6P18320_001 | Banana | nucleus | 28.0 | 20.59 |
| GSMUA_Achr3P29380_001 | Banana | nucleus | 21.6 | 20.53 |
| GSMUA_Achr4P03670_001 | Banana | nucleus | 24.0 | 20.41 |
| GSMUA_Achr8P14650_001 | Banana | nucleus | 26.4 | 15.94 |
| GSMUA_Achr11P... | Banana | nucleus | 19.6 | 14.58 |
Protein Annotations
| MapMan:15.5.5.3 | Gene3D:2.40.330.10 | InterPro:B3_DNA-bd | InterPro:DNA-bd_pseudobarrel_sf | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr4G26430_001 | EnsemblPlants:GSMUA_Achr4P26430_001 | EnsemblPlants:GSMUA_Achr4T26430_001 | InterPro:IPR003340 | InterPro:IPR015300 |
| UniProt:M0SSA5 | PFAM:PF02362 | PFscan:PS50863 | PANTHER:PTHR31140 | PANTHER:PTHR31140:SF4 | SMART:SM01019 |
| SUPFAM:SSF101936 | UniParc:UPI0002968C4A | SEG:seg | : | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr4G26430_001]
Coordinates
chr4:-:25734486..25735400
Molecular Weight (calculated)
27834.0 Da
IEP (calculated)
9.283
GRAVY (calculated)
-0.577
Length
250 amino acids
Sequence
(BLAST)
(BLAST)
001: MELTHGKRES FYDTDQEDEQ VEFCRHPPFV PCSPSPSSLS TGVRSIDGMG NDSFILKEHM FDKVVTPSDV GKLNRLVVPK QHAERHLPMD ALANEKGLLL
101: CFEDRTGKPW RFRYSYWNSS QSYVMTKGWS RFVKEKGLDA GDTVSFSRGV GEAGRHRLYI DWKRRPQSRA LPRAGSSGVP SAPLVRGQAA VKRVRLFGVN
201: LDCPDTEGDA NCRIRSTPPV GAPRFQPRTA PPLLEPSRAV GETLACSSSL
101: CFEDRTGKPW RFRYSYWNSS QSYVMTKGWS RFVKEKGLDA GDTVSFSRGV GEAGRHRLYI DWKRRPQSRA LPRAGSSGVP SAPLVRGQAA VKRVRLFGVN
201: LDCPDTEGDA NCRIRSTPPV GAPRFQPRTA PPLLEPSRAV GETLACSSSL
001: MDLSLAPTTT TSSDQEQDRD QELTSNIGAS SSSGPSGNNN NLPMMMIPPP EKEHMFDKVV TPSDVGKLNR LVIPKQHAER YFPLDSSNNQ NGTLLNFQDR
101: NGKMWRFRYS YWNSSQSYVM TKGWSRFVKE KKLDAGDIVS FQRGIGDESE RSKLYIDWRH RPDMSLVQAH QFEYNSVPIH RGLNIGNHQR SYYNTQRQEF
201: VGYGYGNLAG RCYYTGSPLD HRNIVGSEPL VIDSVPVVPG RLTPVMLPPL PPPPSTAGKR LRLFGVNMEC GNDYNQQEES WLVPRGEIGA SSSSSSALRL
301: NLSTDHDDDN DDGDDGDDDQ FAKKGKSSLS LNFNP
101: NGKMWRFRYS YWNSSQSYVM TKGWSRFVKE KKLDAGDIVS FQRGIGDESE RSKLYIDWRH RPDMSLVQAH QFEYNSVPIH RGLNIGNHQR SYYNTQRQEF
201: VGYGYGNLAG RCYYTGSPLD HRNIVGSEPL VIDSVPVVPG RLTPVMLPPL PPPPSTAGKR LRLFGVNMEC GNDYNQQEES WLVPRGEIGA SSSSSSALRL
301: NLSTDHDDDN DDGDDGDDDQ FAKKGKSSLS LNFNP
Arabidopsis Description
NGA3NGA3 [Source:UniProtKB/TrEMBL;Acc:A0A178W3T3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.