Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
21132161
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH47753 | Soybean | nucleus | 76.46 | 89.0 |
| Zm00001d035982_P001 | Maize | nucleus | 10.82 | 71.59 |
| KRH68988 | Soybean | nucleus | 40.72 | 56.43 |
| KRG97268 | Soybean | nucleus | 39.0 | 54.96 |
| GSMUA_Achr4P26430_001 | Banana | nucleus | 22.51 | 52.4 |
| GSMUA_Achr4P30170_001 | Banana | nucleus | 21.65 | 50.6 |
| Bra004501.1-P | Field mustard | nucleus | 25.43 | 49.83 |
| CDX80053 | Canola | nucleus | 25.43 | 49.83 |
| CDY41564 | Canola | nucleus | 25.26 | 49.49 |
| GSMUA_Achr5P12850_001 | Banana | nucleus | 17.87 | 49.29 |
| Bra040478.1-P | Field mustard | nucleus | 24.23 | 48.12 |
| Os04t0581400-01 | Rice | nucleus | 24.05 | 47.78 |
| AT2G46870.1 | Thale cress | nucleus | 25.43 | 47.74 |
| CDY48008 | Canola | nucleus | 24.91 | 47.7 |
| CDY50908 | Canola | nucleus | 25.77 | 47.62 |
| Bra000434.1-P | Field mustard | nucleus | 25.26 | 47.42 |
| Zm00001d048815_P001 | Maize | nucleus | 18.9 | 47.41 |
| CDY27515 | Canola | nucleus | 24.74 | 47.37 |
| PGSC0003DMT400015010 | Potato | nucleus | 24.4 | 47.33 |
| Solyc08g013700.1.1 | Tomato | nucleus | 23.88 | 47.28 |
| CDX76605 | Canola | nucleus | 23.71 | 47.26 |
| CDY11388 | Canola | nucleus | 23.71 | 47.26 |
| Bra003482.1-P | Field mustard | nucleus | 23.2 | 47.2 |
| CDY69432 | Canola | nucleus | 22.51 | 47.12 |
| CDX83351 | Canola | nucleus | 24.91 | 47.08 |
| CDX67872 | Canola | nucleus | 23.02 | 47.02 |
| Bra007646.1-P | Field mustard | nucleus | 23.54 | 46.92 |
| AT3G61970.1 | Thale cress | nucleus | 23.88 | 46.49 |
| PGSC0003DMT400015011 | Potato | nucleus | 24.74 | 46.01 |
| Zm00001d010077_P001 | Maize | nucleus | 20.27 | 45.56 |
| GSMUA_Achr4P24970_001 | Banana | nucleus | 18.38 | 45.53 |
| EER92015 | Sorghum | nucleus | 21.31 | 45.26 |
| GSMUA_Achr1P03600_001 | Banana | nucleus | 25.6 | 45.15 |
| Zm00001d029749_P001 | Maize | nucleus | 21.13 | 45.05 |
| CDY58763 | Canola | nucleus | 24.57 | 44.97 |
| TraesCS5A01G516600.1 | Wheat | nucleus | 24.4 | 44.8 |
| Bra014415.1-P | Field mustard | nucleus | 24.57 | 44.69 |
| CDY58764 | Canola | nucleus | 24.57 | 44.69 |
| TraesCS4B01G348500.1 | Wheat | nucleus | 24.4 | 44.51 |
| TraesCS6B01G286900.1 | Wheat | nucleus | 31.27 | 44.5 |
| Solyc08g013690.1.1 | Tomato | nucleus | 24.74 | 44.44 |
| Zm00001d047359_P001 | Maize | nucleus | 21.13 | 44.4 |
| TraesCS6A01G259600.1 | Wheat | nucleus | 31.44 | 44.2 |
| TraesCS6D01G240600.1 | Wheat | nucleus | 31.27 | 43.96 |
| Os02t0683500-01 | Rice | nucleus | 31.1 | 43.93 |
| TraesCS7A01G461000.1 | Wheat | nucleus | 14.6 | 43.59 |
| TraesCS7A01G020800.1 | Wheat | nucleus | 14.78 | 43.43 |
| Os03t0120900-01 | Rice | nucleus | 23.2 | 43.41 |
| HORVU6Hr1G066190.2 | Barley | nucleus | 30.41 | 43.28 |
| TraesCS7D01G448900.1 | Wheat | nucleus | 14.43 | 42.86 |
| GSMUA_Achr5P10220_001 | Banana | nucleus | 19.93 | 42.65 |
| HORVU0Hr1G022200.1 | Barley | nucleus | 14.6 | 42.5 |
| TraesCS7B01G362500.1 | Wheat | nucleus | 14.26 | 42.35 |
| TraesCS2A01G394700.1 | Wheat | nucleus | 29.38 | 42.33 |
| TraesCS1A01G200500.1 | Wheat | nucleus | 20.1 | 42.09 |
| TraesCS2B01G412700.1 | Wheat | nucleus | 29.55 | 42.05 |
| TraesCS2D01G392400.1 | Wheat | nucleus | 29.55 | 42.05 |
| GSMUA_Achr2P00400_001 | Banana | nucleus | 20.79 | 42.01 |
| TraesCS4A01G472700.1 | Wheat | nucleus | 15.64 | 41.94 |
| Zm00001d027409_P001 | Maize | nucleus | 23.54 | 41.9 |
| OQU93364 | Sorghum | nucleus | 23.71 | 41.82 |
| Os06t0107800-02 | Rice | nucleus | 14.26 | 41.71 |
| Zm00001d002562_P001 | Maize | nucleus | 29.21 | 41.56 |
| TraesCS1B01G215000.1 | Wheat | nucleus | 19.59 | 41.45 |
| HORVU4Hr1G084950.3 | Barley | nucleus | 24.05 | 41.06 |
| TraesCS7A01G020700.1 | Wheat | nucleus | 15.12 | 40.93 |
| GSMUA_Achr9P18780_001 | Banana | nucleus | 20.1 | 40.91 |
| EES12712 | Sorghum | nucleus | 29.38 | 40.71 |
| Os10t0537100-00 | Rice | nucleus | 21.82 | 40.71 |
| TraesCS7D01G017000.1 | Wheat | nucleus | 15.12 | 40.55 |
| HORVU1Hr1G051780.2 | Barley | nucleus | 20.27 | 40.27 |
| TraesCS1D01G203900.1 | Wheat | nucleus | 20.1 | 40.21 |
| Zm00001d024103_P001 | Maize | nucleus | 15.46 | 40.18 |
| Zm00001d035903_P001 | Maize | nucleus | 15.46 | 40.18 |
| HORVU7Hr1G046950.1 | Barley | nucleus | 18.9 | 40.15 |
| Zm00001d026005_P001 | Maize | nucleus | 27.66 | 39.85 |
| Solyc08g083400.2.1 | Tomato | nucleus | 22.85 | 39.82 |
| GSMUA_Achr2P10230_001 | Banana | nucleus | 20.79 | 39.8 |
| Zm00001d017618_P001 | Maize | nucleus | 28.69 | 39.57 |
| HORVU7Hr1G002230.1 | Barley | nucleus | 14.95 | 39.55 |
| Zm00001d051471_P001 | Maize | nucleus | 28.35 | 39.29 |
| VIT_02s0025g03000.t01 | Wine grape | nucleus | 30.58 | 39.04 |
| GSMUA_Achr7P04630_001 | Banana | nucleus | 13.75 | 38.84 |
| EES07445 | Sorghum | nucleus | 28.69 | 38.48 |
| KXG19112 | Sorghum | nucleus | 13.4 | 38.05 |
| PGSC0003DMT400031863 | Potato | nucleus | 25.95 | 37.19 |
| KXG19111 | Sorghum | nucleus | 15.12 | 36.97 |
| GSMUA_AchrUn_... | Banana | cytosol | 15.29 | 36.93 |
| GSMUA_Achr4P12210_001 | Banana | nucleus | 13.75 | 35.71 |
| KRH67965 | Soybean | nucleus | 17.53 | 35.42 |
| KRG96220 | Soybean | nucleus | 17.87 | 34.78 |
| GSMUA_Achr5P20340_001 | Banana | nucleus | 20.1 | 34.72 |
| Zm00001d024545_P001 | Maize | nucleus | 14.78 | 34.54 |
| EES13386 | Sorghum | nucleus | 14.95 | 34.39 |
| KRH32791 | Soybean | nucleus | 19.59 | 33.83 |
| Os08t0157700-00 | Rice | nucleus | 16.32 | 33.1 |
| KRH72242 | Soybean | nucleus | 19.07 | 32.27 |
| KRH34761 | Soybean | nucleus | 18.21 | 30.2 |
| KRH75484 | Soybean | nucleus | 19.24 | 29.17 |
| KRG92025 | Soybean | nucleus | 18.04 | 29.01 |
| KRH70603 | Soybean | nucleus | 19.24 | 27.93 |
| KRG93082 | Soybean | nucleus | 12.2 | 22.26 |
Protein Annotations
| EntrezGene:100781424 | MapMan:15.5.5.3 | Gene3D:2.40.330.10 | EMBL:ACUP02009827 | InterPro:B3_DNA-bd | ncoils:Coil |
| InterPro:DNA-bd_pseudobarrel_sf | EnsemblPlantsGene:GLYMA_16G017100 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR003340 |
| InterPro:IPR015300 | UniProt:K7MEN3 | EnsemblPlants:KRH06334 | ProteinID:KRH06334 | ProteinID:KRH06334.1 | PFAM:PF02362 |
| PFscan:PS50863 | PANTHER:PTHR31140 | PANTHER:PTHR31140:SF4 | SMART:SM01019 | SUPFAM:SSF101936 | UniParc:UPI000294D056 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr16:-:1484125..1485873
Molecular Weight (calculated)
65554.3 Da
IEP (calculated)
7.490
GRAVY (calculated)
-0.945
Length
582 amino acids
Sequence
(BLAST)
(BLAST)
001: MELMQEVKGY SDSREEEEEE EGAAEEESSR KHHYYPFSSS PSNLYLSSSS APSISSNYTS TTTSAVARPL HHHHVINIPY QQNPWLGMNI VHHDHLIQSP
101: ESHNSSSGLG LLHQHQDAAG SNFIINNNQH HQHHHTTKQL DFMDLSLGSS KDEGNLPGSS SSVYAHHHAA SGSSSVNGNN NLQQQQQPAE KEHMFDKVVT
201: PSDVGKLNRL VIPKQHAEKY FPLDSSANEK GLLLNFEDRN GKLWRFRYSY WNSSQSYVMT KGWSRFVKEK KLDAGDIVSF QRGVGESYRH RLYIDWKRRR
301: DHHHHHHHGP VDPSTTLFTP FFLPNQPHHL MSIRWGATDR LYSLPSPTPP RHHDHLQHQQ PLNYNNNTMY HPFHHHGGGS GINGTTHHYN NYYHEMSSTT
401: NTTTSGSGSV FYLRSTPPSM PLADHQTLNT RQQQQQQQQQ QQQEGGGNVS LPPMIIDSVP VAHHLHHHHH QHQHQHQHHG GKSSGSSSPS TAGKRLRLFG
501: VNMECASSTT SEDHPKCFSL LSSSSSMANS NSSLPPLQLL REDTLSSSAA AAARFGDQRG GVGEPSTSIF FDLDPSLQYR KR
101: ESHNSSSGLG LLHQHQDAAG SNFIINNNQH HQHHHTTKQL DFMDLSLGSS KDEGNLPGSS SSVYAHHHAA SGSSSVNGNN NLQQQQQPAE KEHMFDKVVT
201: PSDVGKLNRL VIPKQHAEKY FPLDSSANEK GLLLNFEDRN GKLWRFRYSY WNSSQSYVMT KGWSRFVKEK KLDAGDIVSF QRGVGESYRH RLYIDWKRRR
301: DHHHHHHHGP VDPSTTLFTP FFLPNQPHHL MSIRWGATDR LYSLPSPTPP RHHDHLQHQQ PLNYNNNTMY HPFHHHGGGS GINGTTHHYN NYYHEMSSTT
401: NTTTSGSGSV FYLRSTPPSM PLADHQTLNT RQQQQQQQQQ QQQEGGGNVS LPPMIIDSVP VAHHLHHHHH QHQHQHQHHG GKSSGSSSPS TAGKRLRLFG
501: VNMECASSTT SEDHPKCFSL LSSSSSMANS NSSLPPLQLL REDTLSSSAA AAARFGDQRG GVGEPSTSIF FDLDPSLQYR KR
001: MDLSLAPTTT TSSDQEQDRD QELTSNIGAS SSSGPSGNNN NLPMMMIPPP EKEHMFDKVV TPSDVGKLNR LVIPKQHAER YFPLDSSNNQ NGTLLNFQDR
101: NGKMWRFRYS YWNSSQSYVM TKGWSRFVKE KKLDAGDIVS FQRGIGDESE RSKLYIDWRH RPDMSLVQAH QFGNFGFNFN FPTTSQYSNR FHPLPEYNSV
201: PIHRGLNIGN HQRSYYNTQR QEFVGYGYGN LAGRCYYTGS PLDHRNIVGS EPLVIDSVPV VPGRLTPVML PPLPPPPSTA GKRLRLFGVN MECGNDYNQQ
301: EESWLVPRGE IGASSSSSSA LRLNLSTDHD DDNDDGDDGD DDQFAKKGKS SLSLNFNP
101: NGKMWRFRYS YWNSSQSYVM TKGWSRFVKE KKLDAGDIVS FQRGIGDESE RSKLYIDWRH RPDMSLVQAH QFGNFGFNFN FPTTSQYSNR FHPLPEYNSV
201: PIHRGLNIGN HQRSYYNTQR QEFVGYGYGN LAGRCYYTGS PLDHRNIVGS EPLVIDSVPV VPGRLTPVML PPLPPPPSTA GKRLRLFGVN MECGNDYNQQ
301: EESWLVPRGE IGASSSSSSA LRLNLSTDHD DDNDDGDDGD DDQFAKKGKS SLSLNFNP
Arabidopsis Description
NGA3NGA3 [Source:UniProtKB/TrEMBL;Acc:A0A178W3T3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.