Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY48008 | Canola | nucleus | 83.55 | 85.2 |
| Bra040478.1-P | Field mustard | nucleus | 80.32 | 84.98 |
| CDY27515 | Canola | nucleus | 82.58 | 84.21 |
| CDY41564 | Canola | nucleus | 79.68 | 83.17 |
| CDX80053 | Canola | nucleus | 79.35 | 82.83 |
| Bra004501.1-P | Field mustard | nucleus | 79.35 | 82.83 |
| CDX83351 | Canola | nucleus | 81.61 | 82.14 |
| CDY50908 | Canola | nucleus | 83.23 | 81.9 |
| Bra000434.1-P | Field mustard | nucleus | 81.61 | 81.61 |
| AT3G61970.1 | Thale cress | nucleus | 60.65 | 62.88 |
| Zm00001d035982_P001 | Maize | nucleus | 17.42 | 61.36 |
| TraesCS7A01G020800.1 | Wheat | nucleus | 28.06 | 43.94 |
| TraesCS7A01G461000.1 | Wheat | nucleus | 27.42 | 43.59 |
| GSMUA_Achr4P26430_001 | Banana | nucleus | 34.84 | 43.2 |
| TraesCS7D01G448900.1 | Wheat | nucleus | 27.1 | 42.86 |
| TraesCS7B01G362500.1 | Wheat | nucleus | 26.77 | 42.35 |
| HORVU0Hr1G022200.1 | Barley | nucleus | 27.1 | 42.0 |
| Zm00001d048815_P001 | Maize | nucleus | 31.29 | 41.81 |
| Os06t0107800-02 | Rice | nucleus | 26.77 | 41.71 |
| TraesCS4A01G472700.1 | Wheat | nucleus | 29.03 | 41.47 |
| GSMUA_Achr4P30170_001 | Banana | nucleus | 33.23 | 41.37 |
| Os03t0120900-01 | Rice | nucleus | 41.29 | 41.16 |
| TraesCS7A01G020700.1 | Wheat | nucleus | 28.06 | 40.47 |
| TraesCS4B01G348500.1 | Wheat | nucleus | 41.61 | 40.44 |
| TraesCS5A01G516600.1 | Wheat | nucleus | 41.29 | 40.38 |
| Zm00001d029749_P001 | Maize | nucleus | 35.48 | 40.29 |
| TraesCS7D01G017000.1 | Wheat | nucleus | 28.06 | 40.09 |
| HORVU7Hr1G002230.1 | Barley | nucleus | 28.39 | 40.0 |
| EER92015 | Sorghum | nucleus | 35.16 | 39.78 |
| Zm00001d010077_P001 | Maize | nucleus | 33.23 | 39.77 |
| AT1G01030.1 | Thale cress | nucleus | 45.81 | 39.66 |
| TraesCS1B01G215000.1 | Wheat | nucleus | 35.16 | 39.64 |
| KXG19112 | Sorghum | nucleus | 26.13 | 39.51 |
| Zm00001d047359_P001 | Maize | nucleus | 35.16 | 39.35 |
| AT2G36080.1 | Thale cress | nucleus | 30.97 | 39.34 |
| TraesCS1A01G200500.1 | Wheat | nucleus | 35.16 | 39.21 |
| Zm00001d035903_P001 | Maize | nucleus | 28.06 | 38.84 |
| GSMUA_Achr4P12210_001 | Banana | nucleus | 28.06 | 38.84 |
| OQU93364 | Sorghum | nucleus | 41.29 | 38.79 |
| Zm00001d024103_P001 | Maize | nucleus | 27.74 | 38.39 |
| Zm00001d027409_P001 | Maize | nucleus | 40.0 | 37.92 |
| GSMUA_Achr5P12850_001 | Banana | nucleus | 25.81 | 37.91 |
| HORVU1Hr1G051780.2 | Barley | nucleus | 35.81 | 37.88 |
| GSMUA_Achr7P04630_001 | Banana | nucleus | 25.16 | 37.86 |
| Os10t0537100-00 | Rice | nucleus | 38.06 | 37.82 |
| TraesCS1D01G203900.1 | Wheat | nucleus | 35.16 | 37.46 |
| GSMUA_Achr1P03600_001 | Banana | nucleus | 39.68 | 37.27 |
| HORVU4Hr1G084950.3 | Barley | nucleus | 40.97 | 37.24 |
| HORVU7Hr1G046950.1 | Barley | nucleus | 32.9 | 37.23 |
| GSMUA_Achr4P24970_001 | Banana | nucleus | 27.42 | 36.17 |
| GSMUA_AchrUn_... | Banana | cytosol | 28.06 | 36.1 |
| KXG19111 | Sorghum | nucleus | 27.42 | 35.71 |
| KRG97268 | Soybean | nucleus | 46.77 | 35.11 |
| KRH68988 | Soybean | nucleus | 47.1 | 34.76 |
| Os04t0581400-01 | Rice | nucleus | 32.26 | 34.13 |
| VIT_15s0048g02370.t01 | Wine grape | nucleus | 50.65 | 34.06 |
| AT5G06250.4 | Thale cress | nucleus | 30.97 | 33.8 |
| TraesCS2B01G412700.1 | Wheat | nucleus | 44.52 | 33.74 |
| TraesCS2A01G394700.1 | Wheat | nucleus | 43.87 | 33.66 |
| GSMUA_Achr9P18780_001 | Banana | nucleus | 30.97 | 33.57 |
| TraesCS2D01G392400.1 | Wheat | nucleus | 44.19 | 33.5 |
| Os02t0683500-01 | Rice | nucleus | 44.52 | 33.5 |
| GSMUA_Achr5P10220_001 | Banana | nucleus | 29.35 | 33.46 |
| Zm00001d024545_P001 | Maize | nucleus | 26.77 | 33.33 |
| GSMUA_Achr2P00400_001 | Banana | nucleus | 30.97 | 33.33 |
| GSMUA_Achr2P10230_001 | Banana | nucleus | 32.58 | 33.22 |
| EES13386 | Sorghum | nucleus | 26.77 | 32.81 |
| Zm00001d002562_P001 | Maize | nucleus | 43.23 | 32.76 |
| Zm00001d051471_P001 | Maize | nucleus | 44.19 | 32.62 |
| Zm00001d026005_P001 | Maize | nucleus | 42.26 | 32.43 |
| TraesCS6B01G286900.1 | Wheat | nucleus | 42.26 | 32.03 |
| Zm00001d017618_P001 | Maize | nucleus | 43.23 | 31.75 |
| EES12712 | Sorghum | nucleus | 42.9 | 31.67 |
| TraesCS6A01G259600.1 | Wheat | nucleus | 42.26 | 31.64 |
| HORVU6Hr1G066190.2 | Barley | nucleus | 41.61 | 31.54 |
| Os08t0157700-00 | Rice | nucleus | 29.03 | 31.36 |
| EES07445 | Sorghum | nucleus | 43.87 | 31.34 |
| TraesCS6D01G240600.1 | Wheat | nucleus | 41.61 | 31.16 |
| VIT_02s0025g03000.t01 | Wine grape | nucleus | 45.81 | 31.14 |
| GSMUA_Achr5P20340_001 | Banana | nucleus | 33.55 | 30.86 |
| KRH47753 | Soybean | nucleus | 48.39 | 30.0 |
| AT4G01500.1 | Thale cress | nucleus | 31.29 | 29.13 |
| AT1G13260.1 | Thale cress | nucleus | 29.35 | 26.45 |
| AT1G68840.1 | Thale cress | nucleus | 29.68 | 26.14 |
| AT3G11580.3 | Thale cress | cytosol, endoplasmic reticulum, nucleus | 30.97 | 25.88 |
| KRH06334 | Soybean | nucleus | 47.74 | 25.43 |
| AT1G25560.1 | Thale cress | nucleus | 28.71 | 24.65 |
| AT3G25730.1 | Thale cress | nucleus | 26.45 | 24.62 |
| AT1G50680.1 | Thale cress | nucleus | 17.1 | 15.73 |
| AT1G51120.1 | Thale cress | nucleus | 17.74 | 15.62 |
Protein Annotations
| MapMan:15.5.5.3 | Gene3D:2.40.330.10 | EntrezGene:819300 | ProteinID:AAC34233.1 | ProteinID:AAM15018.1 | ProteinID:AEC10765.1 |
| EMBL:AK118045 | ArrayExpress:AT2G46870 | EnsemblPlantsGene:AT2G46870 | RefSeq:AT2G46870 | TAIR:AT2G46870 | RefSeq:AT2G46870-TAIR-G |
| EnsemblPlants:AT2G46870.1 | TAIR:AT2G46870.1 | Unigene:At.36441 | InterPro:B3_DNA-bd | EMBL:BT008534 | InterPro:DNA-bd_pseudobarrel_sf |
| GO:GO:0000003 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009653 |
| GO:GO:0009791 | GO:GO:0009908 | GO:GO:0009987 | GO:GO:0048366 | GO:GO:1901371 | InterPro:IPR003340 |
| InterPro:IPR015300 | Symbol:NGA1 | RefSeq:NP_566089.1 | UniProt:O82799 | PFAM:PF02362 | PO:PO:0000037 |
| PO:PO:0000293 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007115 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0025022 | PFscan:PS50863 | PANTHER:PTHR31140 | PANTHER:PTHR31140:SF38 |
| SMART:SM01019 | SUPFAM:SSF101936 | UniParc:UPI0000052A1B | SEG:seg | : | : |
Description
NGA1B3 domain-containing transcription factor NGA1 [Source:UniProtKB/Swiss-Prot;Acc:O82799]
Coordinates
chr2:+:19260906..19262533
Molecular Weight (calculated)
34891.5 Da
IEP (calculated)
6.747
GRAVY (calculated)
-0.744
Length
310 amino acids
Sequence
(BLAST)
(BLAST)
001: MMTDLSLTRD EDEEEAKPLA EEEGAREVAD REHMFDKVVT PSDVGKLNRL VIPKQHAERF FPLDSSSNEK GLLLNFEDLT GKSWRFRYSY WNSSQSYVMT
101: KGWSRFVKDK KLDAGDIVSF QRCVGDSGRD SRLFIDWRRR PKVPDHPHFA AGAMFPRFYS FPSTNYSLYN HQQQRHHHSG GGYNYHQIPR EFGYGYFVRS
201: VDQRNNPAAA VADPLVIESV PVMMHGRANQ ELVGTAGKRL RLFGVDMECG ESGMTNSTEE ESSSSGGSLP RGGGGGASSS SFFQLRLGSS SEDDHFTKKG
301: KSSLSFDLDQ
101: KGWSRFVKDK KLDAGDIVSF QRCVGDSGRD SRLFIDWRRR PKVPDHPHFA AGAMFPRFYS FPSTNYSLYN HQQQRHHHSG GGYNYHQIPR EFGYGYFVRS
201: VDQRNNPAAA VADPLVIESV PVMMHGRANQ ELVGTAGKRL RLFGVDMECG ESGMTNSTEE ESSSSGGSLP RGGGGGASSS SFFQLRLGSS SEDDHFTKKG
301: KSSLSFDLDQ
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.