Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY43751 | Canola | nucleus | 88.11 | 88.48 |
| Bra017262.1-P | Field mustard | nucleus | 88.52 | 88.16 |
| CDX75073 | Canola | nucleus | 88.93 | 87.5 |
| Bra005301.1-P | Field mustard | nucleus | 88.93 | 87.5 |
| CDX84162 | Canola | nucleus | 86.07 | 86.42 |
| AT5G06250.4 | Thale cress | nucleus | 58.2 | 50.0 |
| GSMUA_Achr9P02600_001 | Banana | nucleus | 36.89 | 46.63 |
| GSMUA_Achr3P19210_001 | Banana | nucleus | 38.11 | 46.27 |
| TraesCS5A01G127100.1 | Wheat | nucleus | 47.13 | 43.23 |
| TraesCS5B01G126200.1 | Wheat | nucleus | 46.72 | 43.02 |
| GSMUA_Achr6P13140_001 | Banana | nucleus | 43.44 | 42.91 |
| TraesCS5D01G134700.1 | Wheat | nucleus | 46.72 | 42.86 |
| Os11t0156000-01 | Rice | nucleus | 48.36 | 42.29 |
| GSMUA_Achr6P35600_001 | Banana | nucleus | 41.8 | 42.15 |
| KRH67965 | Soybean | nucleus | 49.59 | 42.01 |
| KXG27771 | Sorghum | nucleus | 46.31 | 41.24 |
| TraesCS4A01G198300.2 | Wheat | nucleus | 47.13 | 41.22 |
| KRG96220 | Soybean | nucleus | 50.41 | 41.14 |
| TraesCS4B01G117100.1 | Wheat | nucleus | 46.72 | 40.86 |
| TraesCS2B01G482400.1 | Wheat | nucleus | 44.67 | 40.82 |
| TraesCS2D01G460900.1 | Wheat | nucleus | 44.67 | 40.82 |
| VIT_08s0007g02810.t01 | Wine grape | nucleus | 47.54 | 40.7 |
| TraesCS2A01G460700.1 | Wheat | nucleus | 44.26 | 40.6 |
| TraesCS4D01G114900.1 | Wheat | nucleus | 46.72 | 40.43 |
| HORVU4Hr1G021650.22 | Barley | nucleus | 44.26 | 38.71 |
| Zm00001d023446_P001 | Maize | nucleus | 44.67 | 38.52 |
| KRH32791 | Soybean | nucleus | 52.87 | 38.28 |
| GSMUA_Achr11P... | Banana | nucleus | 28.28 | 37.3 |
| GSMUA_Achr9P08980_001 | Banana | nucleus | 24.59 | 37.04 |
| KRH72242 | Soybean | nucleus | 51.64 | 36.63 |
| HORVU5Hr1G040620.4 | Barley | nucleus | 40.98 | 36.5 |
| AT3G11580.3 | Thale cress | cytosol, endoplasmic reticulum, nucleus | 54.51 | 35.85 |
| Zm00001d052591_P001 | Maize | nucleus | 45.08 | 35.83 |
| Solyc09g010230.1.1 | Tomato | nucleus | 49.59 | 35.07 |
| KXG22988 | Sorghum | plastid | 45.9 | 35.0 |
| PGSC0003DMT400023077 | Potato | nucleus | 47.54 | 34.63 |
| AT2G46870.1 | Thale cress | nucleus | 39.34 | 30.97 |
| AT3G61970.1 | Thale cress | nucleus | 36.48 | 29.77 |
| Os12t0157000-01 | Rice | cytosol, nucleus | 22.54 | 26.19 |
| AT1G13260.1 | Thale cress | nucleus | 36.89 | 26.16 |
| AT1G01030.1 | Thale cress | nucleus | 38.11 | 25.98 |
| AT3G25730.1 | Thale cress | nucleus | 34.43 | 25.23 |
| AT4G01500.1 | Thale cress | nucleus | 33.2 | 24.32 |
| AT1G68840.1 | Thale cress | nucleus | 34.84 | 24.15 |
| AT1G25560.1 | Thale cress | nucleus | 34.84 | 23.55 |
| GSMUA_Achr6P18320_001 | Banana | nucleus | 29.92 | 21.47 |
| AT1G50680.1 | Thale cress | nucleus | 23.77 | 17.21 |
| AT1G51120.1 | Thale cress | nucleus | 23.77 | 16.48 |
Protein Annotations
| MapMan:15.5.5.3 | Gene3D:2.40.330.10 | EntrezGene:818181 | UniProt:A0A178VSG2 | ProteinID:AAD26965.1 | ProteinID:AAM15343.1 |
| ProteinID:AEC09203.1 | ProteinID:AEC09204.1 | EMBL:AJ441075 | EMBL:AK117587 | ProteinID:ANM62123.1 | ProteinID:ANM62124.1 |
| ArrayExpress:AT2G36080 | EnsemblPlantsGene:AT2G36080 | RefSeq:AT2G36080 | TAIR:AT2G36080 | RefSeq:AT2G36080-TAIR-G | EnsemblPlants:AT2G36080.1 |
| TAIR:AT2G36080.1 | Unigene:At.23308 | InterPro:B3_DNA-bd | InterPro:DNA-bd_pseudobarrel_sf | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009628 | GO:GO:0009987 | GO:GO:0045892 | GO:GO:0080167 | InterPro:IPR003340 |
| InterPro:IPR015300 | RefSeq:NP_001324302.1 | RefSeq:NP_001324303.1 | RefSeq:NP_181152.2 | RefSeq:NP_850260.1 | ProteinID:OAP08776.1 |
| PFAM:PF02362 | PO:PO:0001185 | PO:PO:0007115 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009009 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009047 |
| PO:PO:0025022 | PO:PO:0025281 | PFscan:PS50863 | PANTHER:PTHR31140 | PANTHER:PTHR31140:SF2 | UniProt:Q8GYJ2 |
| SMART:SM01019 | SUPFAM:SSF101936 | UniParc:UPI00000ADDCA | SEG:seg | : | : |
Description
ARF31B3 domain-containing protein At2g36080 [Source:UniProtKB/Swiss-Prot;Acc:Q8GYJ2]
Coordinates
chr2:-:15148259..15151634
Molecular Weight (calculated)
28436.7 Da
IEP (calculated)
6.798
GRAVY (calculated)
-0.950
Length
244 amino acids
Sequence
(BLAST)
(BLAST)
001: MSINQYSSDF HYHSLMWQQQ QQQQQHQNDV VEEKEALFEK PLTPSDVGKL NRLVIPKQHA ERYFPLAAAA ADAVEKGLLL CFEDEEGKPW RFRYSYWNSS
101: QSYVLTKGWS RYVKEKHLDA GDVVLFHRHR SDGGRFFIGW RRRGDSSSSS DSYRHVQSNA SLQYYPHAGA QAVESQRGNS KTLRLFGVNM ECQLDSDWSE
201: PSTPDGSNTY TTNHDQFHFY PQQQHYPPPY YMDISFTGDM NRTS
101: QSYVLTKGWS RYVKEKHLDA GDVVLFHRHR SDGGRFFIGW RRRGDSSSSS DSYRHVQSNA SLQYYPHAGA QAVESQRGNS KTLRLFGVNM ECQLDSDWSE
201: PSTPDGSNTY TTNHDQFHFY PQQQHYPPPY YMDISFTGDM NRTS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.