Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G482400.1 | Wheat | nucleus | 96.25 | 96.25 |
| TraesCS5A01G127100.1 | Wheat | nucleus | 93.63 | 93.98 |
| TraesCS5D01G134700.1 | Wheat | nucleus | 93.63 | 93.98 |
| TraesCS4D01G114900.1 | Wheat | nucleus | 76.4 | 72.34 |
| HORVU5Hr1G040620.4 | Barley | nucleus | 73.41 | 71.53 |
| GSMUA_Achr3P19210_001 | Banana | nucleus | 45.32 | 60.2 |
| GSMUA_Achr9P02600_001 | Banana | nucleus | 42.32 | 58.55 |
| GSMUA_Achr6P13140_001 | Banana | nucleus | 52.06 | 56.28 |
| GSMUA_Achr6P35600_001 | Banana | nucleus | 48.69 | 53.72 |
| GSMUA_Achr9P08980_001 | Banana | nucleus | 28.46 | 46.91 |
| Bra017262.1-P | Field mustard | nucleus | 41.57 | 45.31 |
| CDY43751 | Canola | nucleus | 41.2 | 45.27 |
| CDX84162 | Canola | nucleus | 40.82 | 44.86 |
| AT2G36080.1 | Thale cress | nucleus | 40.82 | 44.67 |
| Bra005301.1-P | Field mustard | nucleus | 41.2 | 44.35 |
| CDX75073 | Canola | nucleus | 41.2 | 44.35 |
| Bra001411.1-P | Field mustard | nucleus | 37.83 | 42.8 |
| CDX73868 | Canola | nucleus | 37.83 | 42.8 |
| CDY62470 | Canola | nucleus | 35.96 | 42.11 |
| CDY08512 | Canola | nucleus | 38.95 | 41.94 |
| CDY01036 | Canola | nucleus | 40.07 | 41.63 |
| GSMUA_Achr11P... | Banana | nucleus | 28.84 | 41.62 |
| Bra034828.1-P | Field mustard | nucleus | 39.33 | 40.7 |
| Bra041023.1-P | Field mustard | nucleus | 39.33 | 39.77 |
| TraesCS7D01G448900.1 | Wheat | nucleus | 28.84 | 39.29 |
| AT5G06250.4 | Thale cress | nucleus | 41.57 | 39.08 |
| CDY47260 | Canola | nucleus | 38.95 | 38.95 |
| Bra005886.1-P | Field mustard | nucleus | 38.95 | 38.95 |
| VIT_08s0007g02810.t01 | Wine grape | nucleus | 40.82 | 38.25 |
| KRG96220 | Soybean | nucleus | 40.82 | 36.45 |
| KRH67965 | Soybean | nucleus | 38.95 | 36.11 |
| KRH32791 | Soybean | nucleus | 44.94 | 35.61 |
| PGSC0003DMT400072354 | Potato | nucleus | 37.83 | 35.07 |
| CDX80996 | Canola | nucleus | 35.96 | 34.91 |
| KRH72242 | Soybean | nucleus | 44.19 | 34.3 |
| TraesCS7D01G017000.1 | Wheat | nucleus | 27.34 | 33.64 |
| Solyc10g083210.1.1 | Tomato | nucleus | 38.58 | 33.44 |
| TraesCS1D01G203900.1 | Wheat | nucleus | 35.21 | 32.3 |
| Solyc09g010230.1.1 | Tomato | nucleus | 41.2 | 31.88 |
| Bra009171.1-P | Field mustard | nucleus | 28.46 | 31.8 |
| CDX98911 | Canola | nucleus | 28.46 | 31.8 |
| CDY70080 | Canola | nucleus | 28.46 | 31.8 |
| PGSC0003DMT400023077 | Potato | nucleus | 39.7 | 31.64 |
| AT3G11580.3 | Thale cress | cytosol, endoplasmic reticulum, nucleus | 41.2 | 29.65 |
| GSMUA_Achr6P18320_001 | Banana | nucleus | 34.46 | 27.06 |
| TraesCS4D01G322500.1 | Wheat | nucleus | 30.34 | 26.56 |
| TraesCS2D01G392400.1 | Wheat | nucleus | 38.2 | 24.94 |
| TraesCS3D01G260100.1 | Wheat | nucleus | 34.83 | 24.87 |
| TraesCS6D01G240600.1 | Wheat | nucleus | 36.7 | 23.67 |
| TraesCS1D01G378900.1 | Wheat | nucleus | 34.46 | 23.47 |
| TraesCS3D01G052300.1 | Wheat | nucleus | 31.09 | 23.31 |
| TraesCS3D01G052400.1 | Wheat | nucleus | 30.71 | 23.23 |
| TraesCS1D01G378400.1 | Wheat | nucleus | 34.83 | 22.57 |
| TraesCS4D01G322600.1 | Wheat | nucleus | 30.34 | 22.38 |
| TraesCS1D01G378500.1 | Wheat | nucleus | 34.83 | 22.2 |
| TraesCS1D01G378800.1 | Wheat | nucleus | 34.46 | 22.17 |
Protein Annotations
| EnsemblPlants:TraesCS2D01G460900.1 | EnsemblPlantsGene:TraesCS2D01G460900 | Gene3D:2.40.330.10 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | InterPro:B3_DNA-bd | InterPro:DNA-bd_pseudobarrel_sf | InterPro:IPR003340 | InterPro:IPR015300 | PANTHER:PTHR31140 |
| PANTHER:PTHR31140:SF19 | PFAM:PF02362 | PFscan:PS50863 | SEG:seg | SMART:SM01019 | SUPFAM:SSF101936 |
| TIGR:cd10017 | MapMan:15.5.5.3 | : | : | : | : |
Description
No Description!
Coordinates
chr2D:+:567477279..567478310
Molecular Weight (calculated)
30023.0 Da
IEP (calculated)
8.451
GRAVY (calculated)
-0.772
Length
267 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMHSLSQGH PQAWPWGVAM YTNLHYHHQH EREHLFEKTL TPSDVGKLNR LVIPKQHAER YFPLNGGDSP GDKDLLLSFE DEAGKPWRFR YSYWTSSQSY
101: VLTKGWSRYV KEKQLDAGHI VHFERVRGLG TGDRLFIHCR RRGESAPPPP VRVPPPALNA GEQQPWSPMC YSTSGSYPTS PANSHVYRRS VEQDHSDMLH
201: AGDSRREADA KSSTASGPPS RRLRLFGVNL DCGPEPEAEA ATPMYGYTHH SPYAAAVATV PTYWGSS
101: VLTKGWSRYV KEKQLDAGHI VHFERVRGLG TGDRLFIHCR RRGESAPPPP VRVPPPALNA GEQQPWSPMC YSTSGSYPTS PANSHVYRRS VEQDHSDMLH
201: AGDSRREADA KSSTASGPPS RRLRLFGVNL DCGPEPEAEA ATPMYGYTHH SPYAAAVATV PTYWGSS
001: MSVNHYHNTL SLHHHHQNDV AIAQRESLFE KSLTPSDVGK LNRLVIPKQH AEKYFPLNNN NNNGGSGDDV ATTEKGMLLS FEDESGKCWK FRYSYWNSSQ
101: SYVLTKGWSR YVKDKHLDAG DVVFFQRHRF DLHRLFIGWR RRGEASSSPA VSVVSQEALV NTTAYWSGLT TPYRQVHAST TYPNIHQEYS HYGAVVDHAQ
201: SIPPVVAGSS RTVRLFGVNL ECHGDAVEPP PRPDVYNDQH IYYYSTPHPM NISFAGEALE QVGDGRG
101: SYVLTKGWSR YVKDKHLDAG DVVFFQRHRF DLHRLFIGWR RRGEASSSPA VSVVSQEALV NTTAYWSGLT TPYRQVHAST TYPNIHQEYS HYGAVVDHAQ
201: SIPPVVAGSS RTVRLFGVNL ECHGDAVEPP PRPDVYNDQH IYYYSTPHPM NISFAGEALE QVGDGRG
Arabidopsis Description
AP2/B3-like transcriptional factor family protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LT60]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.