Factsheet for Bra017262.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY43751	Canola	nucleus	97.55	98.35
AT2G36080.1	Thale cress	nucleus	88.16	88.52
Bra005301.1-P	Field mustard	nucleus	88.57	87.5
Bra034828.1-P	Field mustard	nucleus	53.88	51.16
Bra001411.1-P	Field mustard	nucleus	48.57	50.42
Bra041023.1-P	Field mustard	nucleus	51.84	48.11
Bra005886.1-P	Field mustard	nucleus	51.02	46.82
GSMUA_Achr3P19210_001	Banana	nucleus	38.37	46.77
GSMUA_Achr9P02600_001	Banana	nucleus	36.33	46.11
TraesCS5A01G127100.1	Wheat	nucleus	47.76	43.98
TraesCS5B01G126200.1	Wheat	nucleus	47.35	43.77
TraesCS5D01G134700.1	Wheat	nucleus	47.35	43.61
GSMUA_Achr6P13140_001	Banana	nucleus	43.27	42.91
Os11t0156000-01	Rice	nucleus	48.16	42.29
GSMUA_Achr6P35600_001	Banana	nucleus	41.22	41.74
TraesCS2D01G460900.1	Wheat	nucleus	45.31	41.57
TraesCS2B01G482400.1	Wheat	nucleus	45.31	41.57
TraesCS2A01G460700.1	Wheat	nucleus	44.9	41.35
KXG27771	Sorghum	nucleus	46.12	41.24
KRH67965	Soybean	nucleus	47.76	40.62
Bra009171.1-P	Field mustard	nucleus	39.59	40.59
TraesCS4A01G198300.2	Wheat	nucleus	46.12	40.5
TraesCS4B01G117100.1	Wheat	nucleus	45.71	40.14
VIT_08s0007g02810.t01	Wine grape	nucleus	46.53	40.0
KRG96220	Soybean	nucleus	48.57	39.8
TraesCS4D01G114900.1	Wheat	nucleus	45.71	39.72
Zm00001d023446_P001	Maize	nucleus	44.49	38.52
GSMUA_Achr11P...	Banana	nucleus	28.98	38.38
GSMUA_Achr9P08980_001	Banana	nucleus	25.31	38.27
HORVU4Hr1G021650.22	Barley	nucleus	43.27	37.99
HORVU5Hr1G040620.4	Barley	nucleus	42.04	37.59
KRH32791	Soybean	nucleus	51.02	37.09
Zm00001d052591_P001	Maize	nucleus	45.71	36.48
KRH72242	Soybean	nucleus	50.2	35.76
Solyc09g010230.1.1	Tomato	nucleus	49.39	35.07
KXG22988	Sorghum	plastid	45.71	35.0
PGSC0003DMT400023077	Potato	nucleus	46.53	34.03
Bra040478.1-P	Field mustard	nucleus	37.96	31.74
Bra003482.1-P	Field mustard	nucleus	36.73	31.47
Bra004501.1-P	Field mustard	nucleus	37.55	30.98
Bra000434.1-P	Field mustard	nucleus	38.37	30.32
Bra007646.1-P	Field mustard	nucleus	35.1	29.45
Bra014415.1-P	Field mustard	nucleus	36.33	27.81
Os12t0157000-01	Rice	cytosol, nucleus	23.27	27.14
Bra019821.1-P	Field mustard	nucleus	37.14	26.69
Bra026917.1-P	Field mustard	nucleus	36.73	26.47
Bra033294.1-P	Field mustard	nucleus	36.33	25.87
Bra030497.1-P	Field mustard	nucleus	37.14	25.71
Bra038346.1-P	Field mustard	nucleus, plastid	35.1	24.57
Bra026509.1-P	Field mustard	nucleus	32.24	24.23
Bra011002.1-P	Field mustard	nucleus	34.69	23.68
Bra008552.1-P	Field mustard	nucleus	32.65	23.67
Bra037417.1-P	Field mustard	nucleus	28.98	22.9
Bra024735.1-P	Field mustard	nucleus	34.69	22.85
GSMUA_Achr6P18320_001	Banana	nucleus	31.02	22.35
Bra030476.1-P	Field mustard	nucleus	25.71	19.38
Bra030458.1-P	Field mustard	nucleus	24.08	18.67
Bra018868.1-P	Field mustard	nucleus	25.31	18.34
Bra018869.1-P	Field mustard	nucleus	23.67	17.37
Bra018854.1-P	Field mustard	nucleus	24.08	17.35
Bra014282.1-P	Field mustard	nucleus	23.67	17.11
Bra018894.1-P	Field mustard	nucleus	23.27	16.86

Protein Annotations

MapMan:15.5.5.3	Gene3D:2.40.330.10	InterPro:B3_DNA-bd	EnsemblPlantsGene:Bra017262	EnsemblPlants:Bra017262.1	EnsemblPlants:Bra017262.1-P
InterPro:DNA-bd_pseudobarrel_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR003340	InterPro:IPR015300
UniProt:M4DL81	PFAM:PF02362	PFscan:PS50863	PANTHER:PTHR31140	PANTHER:PTHR31140:SF2	SMART:SM01019
SUPFAM:SSF101936	UniParc:UPI0002544054	SEG:seg	:	:	:

Description

AT2G36080 (E=1e-104) | DNA-binding protein, putative

Coordinates

chrA04:-:15683804..15686458

Molecular Weight (calculated)

28404.7 Da

IEP (calculated)

6.434

GRAVY (calculated)

-0.847

Length

245 amino acids

Sequence
(BLAST)

001: MSINQYSSEF YYHSLMWQQQ QQHHHQNEVV EEKEALFEKP LTPSDVGKLN RLVIPKQHAE RYFPLAAAAV DAVEKGLLLC FEDEEGKPWR FRYSYWNSSQ
101: SYVLTKGWSR YVKEKQLDAG DVVLFHRHRA DGGRFFIGWR RRGDSSSSSD SYRNLQSNSS LQYYPHAGAQ AVENQRGNSK TLRLFGVNME CQIDSDWSEP
201: STPDGFTTCP TNHDQFPIYP EHFPPPYYMD VSFTGDVHQT SSQQG

Best Arabidopsis Sequence Match ( AT2G36080.1 )
(BLAST)

001: MSINQYSSDF HYHSLMWQQQ QQQQQHQNDV VEEKEALFEK PLTPSDVGKL NRLVIPKQHA ERYFPLAAAA ADAVEKGLLL CFEDEEGKPW RFRYSYWNSS
101: QSYVLTKGWS RYVKEKHLDA GDVVLFHRHR SDGGRFFIGW RRRGDSSSSS DSYRHVQSNA SLQYYPHAGA QAVESQRGNS KTLRLFGVNM ECQLDSDWSE
201: PSTPDGSNTY TTNHDQFHFY PQQQHYPPPY YMDISFTGDM NRTS

Arabidopsis Description

ARF31B3 domain-containing protein At2g36080 [Source:UniProtKB/Swiss-Prot;Acc:Q8GYJ2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.