Factsheet for Bra038346.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

nucleus 5
plastid 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY45849	Canola	nucleus, plastid	100.0	100.0
AT1G68840.1	Thale cress	nucleus	79.14	78.69
Bra011002.1-P	Field mustard	nucleus	69.14	67.41
Bra024735.1-P	Field mustard	nucleus	71.43	67.2
Bra019821.1-P	Field mustard	nucleus	62.57	64.22
Bra026917.1-P	Field mustard	nucleus	61.43	63.24
Bra026509.1-P	Field mustard	nucleus	55.14	59.2
KRH34761	Soybean	nucleus	58.0	57.83
GSMUA_Achr5P09950_001	Banana	nucleus	51.71	56.21
KRG92025	Soybean	nucleus	57.71	55.8
VIT_01s0011g03070.t01	Wine grape	nucleus	60.0	55.56
GSMUA_Achr1P05400_001	Banana	nucleus	47.14	55.37
KRH75484	Soybean	nucleus	59.14	53.91
GSMUA_Achr10P...	Banana	nucleus	44.86	53.77
KRH70603	Soybean	nucleus	60.29	52.62
Solyc05g009790.1.1	Tomato	nucleus	59.14	52.41
PGSC0003DMT400002125	Potato	nucleus	58.86	51.76
GSMUA_Achr4P03670_001	Banana	nucleus	43.43	51.7
TraesCS3D01G260100.1	Wheat	nucleus	54.86	51.34
GSMUA_Achr6P09880_001	Banana	nucleus	42.29	51.21
GSMUA_Achr2P22560_001	Banana	nucleus	45.14	50.97
TraesCS3A01G259900.1	Wheat	nucleus	54.29	50.67
HORVU3Hr1G064590.1	Barley	nucleus	28.0	50.52
GSMUA_Achr3P29380_001	Banana	nucleus	37.71	50.19
TraesCS3B01G293000.1	Wheat	nucleus	54.86	50.13
HORVU3Hr1G064640.4	Barley	nucleus	53.71	49.47
Os05t0549800-01	Rice	nucleus	48.0	48.98
Zm00001d009468_P001	Maize	nucleus, plastid	52.29	48.8
TraesCS1A01G372300.1	Wheat	nucleus	54.57	48.72
HORVU4Hr1G074300.4	Barley	nucleus	20.86	48.67
TraesCS1B01G392300.1	Wheat	nucleus	54.29	48.59
Zm00001d043782_P001	Maize	nucleus	54.0	48.59
TraesCS1D01G378900.1	Wheat	nucleus	54.0	48.21
Os01t0693400-01	Rice	nucleus	54.0	48.09
KXG22484	Sorghum	nucleus, plastid	55.71	47.79
GSMUA_Achr4P06710_001	Banana	nucleus	47.71	47.71
HORVU1Hr1G082670.6	Barley	nucleus	52.86	47.07
Zm00001d038907_P001	Maize	nucleus, plastid	54.0	46.55
GSMUA_AchrUn_...	Banana	nucleus	49.71	46.52
EES03472	Sorghum	nucleus, plastid	54.57	46.25
TraesCS1B01G392000.1	Wheat	nucleus	53.14	45.26
TraesCS1D01G378400.1	Wheat	nucleus	53.14	45.15
TraesCS1A01G372200.1	Wheat	nucleus	53.14	45.04
TraesCS1D01G378500.1	Wheat	nucleus	53.71	44.87
Zm00001d011639_P001	Maize	nucleus	51.71	44.69
GSMUA_Achr9P21470_001	Banana	nucleus	39.43	44.52
TraesCS1B01G392200.1	Wheat	nucleus, plastid	52.86	44.47
TraesCS1D01G378800.1	Wheat	nucleus	52.57	44.34
TraesCS1A01G372100.1	Wheat	nucleus	52.0	41.18
GSMUA_Achr3P21100_001	Banana	nucleus	46.86	39.81
Bra001411.1-P	Field mustard	nucleus	24.29	36.02
Bra017262.1-P	Field mustard	nucleus	24.57	35.1
Bra005301.1-P	Field mustard	nucleus	24.57	34.68
Bra034828.1-P	Field mustard	nucleus	24.57	33.33
Bra040478.1-P	Field mustard	nucleus	27.43	32.76
Bra041023.1-P	Field mustard	nucleus	24.57	32.58
Bra004501.1-P	Field mustard	nucleus	27.14	31.99
Bra030458.1-P	Field mustard	nucleus	28.86	31.96
Bra007646.1-P	Field mustard	nucleus	26.57	31.85
Bra003482.1-P	Field mustard	nucleus	26.0	31.82
Bra005886.1-P	Field mustard	nucleus	24.0	31.46
Bra030476.1-P	Field mustard	nucleus	29.14	31.38
Bra018868.1-P	Field mustard	nucleus	29.71	30.77
Bra014282.1-P	Field mustard	nucleus	29.71	30.68
Bra000434.1-P	Field mustard	nucleus	26.86	30.32
Bra018894.1-P	Field mustard	nucleus	28.86	29.88
Bra018854.1-P	Field mustard	nucleus	28.86	29.71
Bra018869.1-P	Field mustard	nucleus	28.0	29.34
Bra014415.1-P	Field mustard	nucleus	26.0	28.44
Bra033294.1-P	Field mustard	nucleus	26.29	26.74
Bra008552.1-P	Field mustard	nucleus	25.71	26.63
Bra030497.1-P	Field mustard	nucleus	26.57	26.27
Bra037417.1-P	Field mustard	nucleus	22.57	25.48
Bra009171.1-P	Field mustard	nucleus	15.43	22.59

Protein Annotations

MapMan:15.5.5.3	MapMan:15.5.7.5	Gene3D:2.40.330.10	Gene3D:3.30.730.10	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf
InterPro:B3_DNA-bd	EnsemblPlantsGene:Bra038346	EnsemblPlants:Bra038346.1	EnsemblPlants:Bra038346.1-P	InterPro:DNA-bd_dom_sf	InterPro:DNA-bd_pseudobarrel_sf
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	GO:GO:0045892
InterPro:IPR001471	InterPro:IPR003340	InterPro:IPR015300	InterPro:IPR036955	UniProt:M4FB80	PFAM:PF00847
PFAM:PF02362	PFscan:PS50863	PFscan:PS51032	PANTHER:PTHR31140	PANTHER:PTHR31140:SF9	SMART:SM00380
SMART:SM01019	SUPFAM:SSF101936	SUPFAM:SSF54171	UniParc:UPI00025464A4	SEG:seg	:

Description

AT1G68840 (E=6e-139) RAV2, RAP2.8, TEM2 | RAV2 (REGULATOR OF THE ATPASE OF THE VACUOLAR MEMBRANE); DNA binding / transcription factor/ transcription repressor

Coordinates

chrA02:+:11104316..11105368

Molecular Weight (calculated)

39062.2 Da

IEP (calculated)

10.116

GRAVY (calculated)

-0.438

Length

350 amino acids

Sequence
(BLAST)

001: MVFSCIDESS STSESFSPAT ATATATATKF SAPPLPPLRL NRMRSGGSNV VLDSKNGVDI DSRKLSSSKY KGVVPQPNGR WGAQIYVKHQ RVWLGTFCDE
101: EEAAHSYDIA ARKFRGRDAV VNFKTFLASE DDNGELCFLE AHSKAEIVDM LRKHTYADEL AQSNKRSGAN TNTNTTQSHT VSRTREVLFE KVVTPSDVGK
201: LNRLVIPKQH AEKYFPLPSL SVTKGVLINF EDVTGKVWRF RYSYWNSSQS YVLTKGWSRF VKEKNLRAGD VVTFERSTGS DRQLYIDWKI RSGPSKNPVQ
301: VVVRLFGVDI FNVTSAKPSN VVDACGGKRS RDVDMFALRC SKKHAIINAL

Best Arabidopsis Sequence Match ( AT1G68840.2 )
(BLAST)

001: MDSSCIDEIS SSTSESFSAT TAKKLSPPPA AALRLYRMGS GGSSVVLDPE NGLETESRKL PSSKYKGVVP QPNGRWGAQI YEKHQRVWLG TFNEQEEAAR
101: SYDIAACRFR GRDAVVNFKN VLEDGDLAFL EAHSKAEIVD MLRKHTYADE LEQNNKRQLF LSVDANGKRN GSSTTQNDKV LKTREVLFEK AVTPSDVGKL
201: NRLVIPKQHA EKHFPLPSPS PAVTKGVLIN FEDVNGKVWR FRYSYWNSSQ SYVLTKGWSR FVKEKNLRAG DVVTFERSTG LERQLYIDWK VRSGPRENPV
301: QVVVRLFGVD IFNVTTVKPN DVVAVCGGKR SRDVDDMFAL RCSKKQAIIN AL

Arabidopsis Description

RAV2TEM2 [Source:UniProtKB/TrEMBL;Acc:A0A178WNP0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.