Factsheet for Zm00001d009468_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 3
nucleus 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	nucleus, plastid
ChloroP:	plastid
MultiLoc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d038907_P001	Maize	nucleus, plastid	80.27	74.14
Zm00001d043782_P001	Maize	nucleus	71.47	68.89
TraesCS1B01G392300.1	Wheat	nucleus	71.2	68.29
TraesCS1A01G372300.1	Wheat	nucleus	71.2	68.11
TraesCS1D01G378900.1	Wheat	nucleus	70.93	67.86
HORVU1Hr1G082670.6	Barley	nucleus	69.87	66.67
TraesCS1B01G392000.1	Wheat	nucleus	70.93	64.72
Zm00001d011639_P001	Maize	nucleus	69.07	63.95
TraesCS1A01G372200.1	Wheat	nucleus	69.87	63.44
TraesCS1D01G378800.1	Wheat	nucleus	69.87	63.13
TraesCS1D01G378400.1	Wheat	nucleus	69.07	62.86
TraesCS1D01G378500.1	Wheat	nucleus	69.33	62.05
TraesCS1B01G392200.1	Wheat	nucleus, plastid	68.27	61.54
GSMUA_Achr1P21250_001	Banana	nucleus	45.87	58.5
TraesCS1A01G372100.1	Wheat	nucleus	68.8	58.37
Zm00001d035982_P001	Maize	nucleus	13.6	57.95
CDX97996	Canola	nucleus	49.07	56.62
CDY61361	Canola	nucleus	48.8	55.96
CDY58354	Canola	nucleus	48.53	55.83
CDY72302	Canola	nucleus	48.53	55.83
KRH34761	Soybean	nucleus	52.0	55.56
CDY40973	Canola	nucleus	46.67	55.56
Bra019821.1-P	Field mustard	nucleus	49.33	54.25
Bra026917.1-P	Field mustard	nucleus	48.8	53.82
AT3G25730.1	Thale cress	nucleus	47.73	53.75
CDY36099	Canola	nucleus	50.13	53.71
AT1G68840.1	Thale cress	nucleus	50.4	53.69
KRG92025	Soybean	nucleus	51.73	53.59
CDY24391	Canola	nucleus	48.27	53.55
AT1G13260.1	Thale cress	nucleus	49.07	53.49
CDX84999	Canola	nucleus	50.4	53.39
CDX81561	Canola	nucleus	48.53	53.06
CDY16133	Canola	nucleus	50.4	52.79
Bra026509.1-P	Field mustard	nucleus	45.87	52.76
CDX99755	Canola	nucleus	47.73	52.65
Bra011002.1-P	Field mustard	nucleus	50.13	52.37
CDY45849	Canola	nucleus, plastid	48.8	52.29
Bra038346.1-P	Field mustard	nucleus, plastid	48.8	52.29
Bra024735.1-P	Field mustard	nucleus	50.93	51.34
AT1G25560.1	Thale cress	nucleus	49.33	51.25
VIT_01s0011g03070.t01	Wine grape	nucleus	51.47	51.06
GSMUA_Achr6P01420_001	Banana	nucleus	42.93	50.95
CDX83547	Canola	nucleus	43.73	50.62
KRH75484	Soybean	nucleus	51.73	50.52
HORVU4Hr1G074300.4	Barley	nucleus	20.0	50.0
KRH70603	Soybean	nucleus	51.73	48.38
Solyc05g009790.1.1	Tomato	nucleus	50.67	48.1
PGSC0003DMT400002125	Potato	nucleus	50.67	47.74
Zm00001d039907_P001	Maize	nucleus	46.4	46.03
Zm00001d048815_P001	Maize	nucleus	24.0	38.79
Zm00001d010077_P001	Maize	nucleus	24.8	35.91
Zm00001d035903_P001	Maize	nucleus	21.33	35.71
Zm00001d024103_P001	Maize	nucleus	20.8	34.82
Zm00001d047359_P001	Maize	nucleus	24.8	33.57
Zm00001d029749_P001	Maize	nucleus	24.27	33.33
Zm00001d023446_P001	Maize	nucleus	24.0	31.8
Zm00001d024545_P001	Maize	nucleus	20.53	30.92
Zm00001d027409_P001	Maize	nucleus	26.67	30.58
Zm00001d052591_P001	Maize	nucleus	23.2	28.34
Zm00001d024354_P001	Maize	nucleus, plastid	20.53	27.02
Zm00001d002562_P001	Maize	nucleus	28.53	26.16
Zm00001d017618_P001	Maize	nucleus	28.8	25.59
Zm00001d026005_P001	Maize	nucleus	27.2	25.25
Zm00001d051471_P001	Maize	nucleus	27.2	24.29

Protein Annotations

EntrezGene:103635292	MapMan:15.5.5.3	MapMan:15.5.7.5	Gene3D:2.40.330.10	Gene3D:3.30.730.10	InterPro:AP2/ERF_dom
InterPro:AP2/ERF_dom_sf	ProteinID:AQK91955.1	InterPro:B3_DNA-bd	InterPro:DNA-bd_dom_sf	InterPro:DNA-bd_pseudobarrel_sf	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471	InterPro:IPR003340	InterPro:IPR015300
InterPro:IPR036955	UniProt:K7UX20	PFAM:PF00847	PFAM:PF02362	PFscan:PS50863	PFscan:PS51032
PANTHER:PTHR31140	PANTHER:PTHR31140:SF21	SMART:SM00380	SMART:SM01019	SUPFAM:SSF101936	SUPFAM:SSF54171
UniParc:UPI00022167C3	EnsemblPlantsGene:Zm00001d009468	EnsemblPlants:Zm00001d009468_P001	EnsemblPlants:Zm00001d009468_T001	SEG:seg	:

Description

AP2-EREBP-transcription factor 49Putative AP2/EREBP transcription factor superfamily protein

Coordinates

chr8:+:65782410..65783537

Molecular Weight (calculated)

40280.6 Da

IEP (calculated)

10.477

GRAVY (calculated)

-0.450

Length

375 amino acids

Sequence
(BLAST)

001: MDSTSCLLDD ASSGASTGKN KPAPVPAPAA VTGKPLQRVG SSGASAVMDA AEPGAEADSD GARRAPGGVG GKLPSSKYKG VVPQPNGRWG AQIYERHQRV
101: WLGTFTGEAE AARAYDVAAQ RFRGRDAVTN FRPLAESDLD PDAAAELRFL ASRSKAEVVD MLRKHTYGEE LAQNRRAFAA AAASLASPQL PPAKNTSPAA
201: AREHLFDKTV TPSDVGKLNR LVIPKQHAER HFPLRRVQGG RAPILSFEDA AGKAWRFRYS YWNSSQSYVL TKGWSRFVKE KGLHAGDAVG FYRSAAAGRQ
301: LFIDCKLRPK AVRLFGVDLL TEPPRSAAAV AQPEPEQEEI AVSKNKRARD AIAASATPVH IAFKKQRVDV ALTTT

Best Arabidopsis Sequence Match ( AT1G68840.2 )
(BLAST)

001: MDSSCIDEIS SSTSESFSAT TAKKLSPPPA AALRLYRMGS GGSSVVLDPE NGLETESRKL PSSKYKGVVP QPNGRWGAQI YEKHQRVWLG TFNEQEEAAR
101: SYDIAACRFR GRDAVVNFKN VLEDGDLAFL EAHSKAEIVD MLRKHTYADE LEQNNKRQLF LSVDANGKRN GSSTTQNDKV LKTREVLFEK AVTPSDVGKL
201: NRLVIPKQHA EKHFPLPSPS PAVTKGVLIN FEDVNGKVWR FRYSYWNSSQ SYVLTKGWSR FVKEKNLRAG DVVTFERSTG LERQLYIDWK VRSGPRENPV
301: QVVVRLFGVD IFNVTTVKPN DVVAVCGGKR SRDVDDMFAL RCSKKQAIIN AL

Arabidopsis Description

RAV2TEM2 [Source:UniProtKB/TrEMBL;Acc:A0A178WNP0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.