Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES02511 | Sorghum | nucleus | 86.77 | 84.54 |
| TraesCSU01G231000.1 | Wheat | mitochondrion, nucleus | 42.06 | 72.94 |
| TraesCS3B01G065000.1 | Wheat | mitochondrion, nucleus | 42.06 | 72.94 |
| Os01t0141000-01 | Rice | nucleus, plastid | 70.11 | 72.6 |
| TraesCS3D01G052400.1 | Wheat | nucleus | 67.46 | 72.24 |
| TraesCS3A01G054000.1 | Wheat | nucleus | 67.72 | 71.91 |
| TraesCS3D01G052300.1 | Wheat | nucleus | 67.46 | 71.63 |
| TraesCS3B01G064900.1 | Wheat | nucleus | 67.46 | 71.63 |
| TraesCSU01G227200.1 | Wheat | nucleus | 66.14 | 71.23 |
| TraesCS3B01G065100.1 | Wheat | nucleus | 64.81 | 70.0 |
| HORVU3Hr1G010240.1 | Barley | nucleus | 63.76 | 69.25 |
| HORVU3Hr1G010200.1 | Barley | mitochondrion | 39.42 | 68.04 |
| TraesCS4B01G325700.1 | Wheat | plastid | 59.79 | 67.26 |
| HORVU4Hr1G082030.2 | Barley | nucleus | 43.92 | 65.35 |
| HORVU3Hr1G010190.5 | Barley | nucleus | 64.81 | 63.8 |
| TraesCS5A01G497900.1 | Wheat | nucleus | 60.85 | 62.5 |
| TraesCS4D01G322600.1 | Wheat | nucleus | 59.79 | 62.43 |
| Zm00001d035982_P001 | Maize | nucleus | 14.29 | 61.36 |
| Zm00001d043782_P001 | Maize | nucleus | 47.88 | 46.53 |
| Zm00001d009468_P001 | Maize | nucleus, plastid | 46.03 | 46.4 |
| Zm00001d011639_P001 | Maize | nucleus | 48.68 | 45.43 |
| Zm00001d038907_P001 | Maize | nucleus, plastid | 48.68 | 45.32 |
| HORVU3Hr1G010140.3 | Barley | nucleus | 38.1 | 37.11 |
| Zm00001d035903_P001 | Maize | nucleus | 21.69 | 36.61 |
| Zm00001d048815_P001 | Maize | nucleus | 21.96 | 35.78 |
| Zm00001d024103_P001 | Maize | nucleus | 20.63 | 34.82 |
| Zm00001d010077_P001 | Maize | nucleus | 21.96 | 32.05 |
| Zm00001d024545_P001 | Maize | nucleus | 20.63 | 31.33 |
| Zm00001d023446_P001 | Maize | nucleus | 21.96 | 29.33 |
| Zm00001d029749_P001 | Maize | nucleus | 21.16 | 29.3 |
| Zm00001d047359_P001 | Maize | nucleus | 21.16 | 28.88 |
| Zm00001d024354_P001 | Maize | nucleus, plastid | 21.43 | 28.42 |
| Zm00001d027409_P001 | Maize | nucleus | 23.02 | 26.61 |
| Zm00001d052591_P001 | Maize | nucleus | 21.43 | 26.38 |
| Zm00001d026005_P001 | Maize | nucleus | 25.4 | 23.76 |
| Zm00001d002562_P001 | Maize | nucleus | 25.4 | 23.47 |
| Zm00001d017618_P001 | Maize | nucleus | 25.4 | 22.75 |
| Zm00001d051471_P001 | Maize | nucleus | 24.07 | 21.67 |
Protein Annotations
| MapMan:15.5.5.3 | MapMan:15.5.7.5 | Gene3D:2.40.330.10 | Gene3D:3.30.730.10 | UniProt:A0A1D6MLR0 | InterPro:AP2/ERF_dom |
| InterPro:AP2/ERF_dom_sf | InterPro:B3_DNA-bd | InterPro:DNA-bd_dom_sf | InterPro:DNA-bd_pseudobarrel_sf | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001471 | InterPro:IPR003340 | InterPro:IPR015300 | InterPro:IPR036955 |
| ProteinID:ONM30148.1 | PFAM:PF00847 | PFAM:PF02362 | PFscan:PS50863 | PFscan:PS51032 | PANTHER:PTHR31140 |
| PANTHER:PTHR31140:SF9 | SMART:SM00380 | SMART:SM01019 | SUPFAM:SSF101936 | SUPFAM:SSF54171 | UniParc:UPI0001E23433 |
| EnsemblPlantsGene:Zm00001d039907 | EnsemblPlants:Zm00001d039907_P001 | EnsemblPlants:Zm00001d039907_T001 | SEG:seg | : | : |
Description
AP2/ERF and B3 domain-containing transcription repressor TEM1
Coordinates
chr3:-:18927896..18929032
Molecular Weight (calculated)
40332.4 Da
IEP (calculated)
10.071
GRAVY (calculated)
-0.417
Length
378 amino acids
Sequence
(BLAST)
(BLAST)
001: MGIESMSPTA AAPEDSSSAA STATTESAAA AQPPPAAAPP GGGAVGGGDA VAVSPAADEQ AVTSQPSAVP QGSSRFKGVV PQPNGRWGAQ IYERHARVWL
101: GTFADEEAAA RAYDVAALRY RGREAATNFP GAGASAPELA FLAAHSKAEI VDMLRKHTYA DELRQGLRRG RSRAQPTPAW ARVLLFDKAV TPSDVGKLNR
201: LVVPKQHAEK HFPLKRAPPS VEAQAPTTAK GVLLNFEDGE GKVWRFRYSY WNSSQSYVLT KGWSRFVREK GLRAGDTIVF SHSTYGSEKQ LFIDCKKTKT
301: TTPATDGVPV PSPAPAEKPS EARVVRLFGV DIAGAGCHHQ KRARPVEISF DHGPQAESFK KQCVAHHHRS PALGAFLL
101: GTFADEEAAA RAYDVAALRY RGREAATNFP GAGASAPELA FLAAHSKAEI VDMLRKHTYA DELRQGLRRG RSRAQPTPAW ARVLLFDKAV TPSDVGKLNR
201: LVVPKQHAEK HFPLKRAPPS VEAQAPTTAK GVLLNFEDGE GKVWRFRYSY WNSSQSYVLT KGWSRFVREK GLRAGDTIVF SHSTYGSEKQ LFIDCKKTKT
301: TTPATDGVPV PSPAPAEKPS EARVVRLFGV DIAGAGCHHQ KRARPVEISF DHGPQAESFK KQCVAHHHRS PALGAFLL
001: MDSSCIDEIS SSTSESFSAT TAKKLSPPPA AALRLYRMGS GGSSVVLDPE NGLETESRKL PSSKYKGVVP QPNGRWGAQI YEKHQRVWLG TFNEQEEAAR
101: SYDIAACRFR GRDAVVNFKN VLEDGDLAFL EAHSKAEIVD MLRKHTYADE LEQNNKRQLF LSVDANGKRN GSSTTQNDKV LKTREVLFEK AVTPSDVGKL
201: NRLVIPKQHA EKHFPLPSPS PAVTKGVLIN FEDVNGKVWR FRYSYWNSSQ SYVLTKGWSR FVKEKNLRAG DVVTFERSTG LERQLYIDWK VRSGPRENPV
301: QVVVRLFGVD IFNVTTVKPN DVVAVCGGKR SRDVDDMFAL RCSKKQAIIN AL
101: SYDIAACRFR GRDAVVNFKN VLEDGDLAFL EAHSKAEIVD MLRKHTYADE LEQNNKRQLF LSVDANGKRN GSSTTQNDKV LKTREVLFEK AVTPSDVGKL
201: NRLVIPKQHA EKHFPLPSPS PAVTKGVLIN FEDVNGKVWR FRYSYWNSSQ SYVLTKGWSR FVKEKNLRAG DVVTFERSTG LERQLYIDWK VRSGPRENPV
301: QVVVRLFGVD IFNVTTVKPN DVVAVCGGKR SRDVDDMFAL RCSKKQAIIN AL
Arabidopsis Description
RAV2TEM2 [Source:UniProtKB/TrEMBL;Acc:A0A178WNP0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.