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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, nucleus

Predictor Summary:
  • nucleus 3
  • mitochondrion 4
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion, nucleus
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:nucleus
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:cytosol
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCSU01G231000.1 Wheat mitochondrion, nucleus 100.0 100.0
HORVU3Hr1G010200.1 Barley mitochondrion 84.86 84.47
TraesCSU01G227200.1 Wheat nucleus 100.0 62.11
TraesCS3D01G052400.1 Wheat nucleus 94.5 58.36
TraesCS3B01G065100.1 Wheat nucleus 88.53 55.14
HORVU3Hr1G010240.1 Barley nucleus 87.61 54.89
TraesCS3B01G064900.1 Wheat nucleus 87.16 53.37
HORVU3Hr1G010190.5 Barley nucleus 87.16 49.48
TraesCS4B01G325700.1 Wheat plastid 71.1 46.13
Os01t0141000-01 Rice nucleus, plastid 75.69 45.21
EES02511 Sorghum nucleus 76.61 43.04
Zm00001d039907_P001 Maize nucleus 72.94 42.06
TraesCS4B01G325600.1 Wheat nucleus 56.88 40.26
TraesCS7B01G362500.1 Wheat nucleus 33.95 37.76
TraesCS1B01G215000.1 Wheat nucleus 36.24 28.73
TraesCS2B01G482400.1 Wheat nucleus 34.86 28.46
TraesCS3B01G293000.1 Wheat nucleus 50.0 28.46
TraesCS1B01G392300.1 Wheat nucleus 50.92 28.39
TraesCS5B01G126200.1 Wheat nucleus 34.4 28.3
TraesCS4B01G117100.1 Wheat nucleus 34.86 27.24
TraesCS1B01G392000.1 Wheat nucleus 50.92 27.01
TraesCS1B01G392200.1 Wheat nucleus, plastid 49.08 25.72
TraesCS4B01G348500.1 Wheat nucleus 37.61 25.71
TraesCS6B01G286900.1 Wheat nucleus 38.99 20.78
TraesCS2B01G412700.1 Wheat nucleus 38.53 20.54
Protein Annotations
EnsemblPlants:TraesCS3B01G065000.1EnsemblPlantsGene:TraesCS3B01G065000Gene3D:2.40.330.10GO:GO:0003674GO:GO:0003676GO:GO:0003677
GO:GO:0005488InterPro:B3_DNA-bdInterPro:DNA-bd_pseudobarrel_sfInterPro:IPR003340InterPro:IPR015300PANTHER:PTHR31140
PANTHER:PTHR31140:SF9PFAM:PF02362PFscan:PS50863SEG:segSMART:SM01019SUPFAM:SSF101936
TIGR:cd10017MapMan:15.5.5.3::::
Description
No Description!
Coordinates
chr3B:+:38212573..38213229
Molecular Weight (calculated)
24221.1 Da
IEP (calculated)
10.839
GRAVY (calculated)
-0.532
Length
218 amino acids
Sequence
(BLAST)
001: MLRKHTYADE LRQGLRRGRG MGARAQPTPS WAREPLFEKA VTPSDVGKLN RLVVPKQHAE KHFPLKRTPE RTTTTGNGVL LNFEDGEGKV WRFRYSYWNS
101: SQSYVLTKGW SRFVREKGLA AGDSIIFSCS AYGQEKQLFI DCKKNTTVNS GKSASPLPVV ETAKGEQVRV VRLFGVDIAG VKRGRAATAE QGPPELLKRQ
201: CVPLPHGQRS PALGAFVL
Best Arabidopsis Sequence Match ( AT1G13260.1 )
(BLAST)
001: MESSSVDEST TSTGSICETP AITPAKKSSV GNLYRMGSGS SVVLDSENGV EAESRKLPSS KYKGVVPQPN GRWGAQIYEK HQRVWLGTFN EEDEAARAYD
101: VAVHRFRRRD AVTNFKDVKM DEDEVDFLNS HSKSEIVDML RKHTYNEELE QSKRRRNGNG NMTRTLLTSG LSNDGVSTTG FRSAEALFEK AVTPSDVGKL
201: NRLVIPKHHA EKHFPLPSSN VSVKGVLLNF EDVNGKVWRF RYSYWNSSQS YVLTKGWSRF VKEKNLRAGD VVSFSRSNGQ DQQLYIGWKS RSGSDLDAGR
301: VLRLFGVNIS PESSRNDVVG NKRVNDTEML SLVCSKKQRI FHAS
Arabidopsis Description
RAV1AP2/ERF and B3 domain-containing transcription factor RAV1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZWM9]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.