Factsheet for HORVU3Hr1G010200.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, nucleus
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G231000.1	Wheat	mitochondrion, nucleus	84.47	84.86
TraesCS3B01G065000.1	Wheat	mitochondrion, nucleus	84.47	84.86
HORVU3Hr1G010190.5	Barley	nucleus	95.43	54.43
TraesCS3D01G052400.1	Wheat	nucleus	87.21	54.11
HORVU3Hr1G010240.1	Barley	nucleus	84.02	52.87
TraesCSU01G227200.1	Wheat	nucleus	84.47	52.71
TraesCS3B01G065100.1	Wheat	nucleus	82.19	51.43
HORVU4Hr1G074300.4	Barley	nucleus	33.79	49.33
HORVU3Hr1G064590.1	Barley	nucleus	39.73	44.85
Os01t0141000-01	Rice	nucleus, plastid	70.32	42.19
HORVU3Hr1G010140.3	Barley	nucleus	72.6	40.98
Zm00001d039907_P001	Maize	nucleus	68.04	39.42
EES02511	Sorghum	nucleus	69.41	39.18
HORVU3Hr1G010100.2	Barley	nucleus	55.71	38.12
HORVU0Hr1G022200.1	Barley	nucleus	32.88	36.0
HORVU3Hr1G010060.1	Barley	nucleus	55.71	34.66
HORVU4Hr1G082090.2	Barley	mitochondrion	52.51	33.43
HORVU4Hr1G082030.2	Barley	nucleus	37.9	32.68
HORVU7Hr1G002230.1	Barley	nucleus	32.42	32.27
HORVU3Hr1G064640.4	Barley	nucleus	45.21	26.05
HORVU1Hr1G082670.6	Barley	nucleus	46.58	25.95
HORVU1Hr1G051780.2	Barley	nucleus	34.7	25.94
HORVU5Hr1G040620.4	Barley	nucleus	30.59	24.45
HORVU4Hr1G021650.22	Barley	nucleus	31.05	24.37
HORVU7Hr1G046950.1	Barley	nucleus	29.68	23.72
HORVU4Hr1G084950.3	Barley	nucleus	35.16	22.58
HORVU6Hr1G066190.2	Barley	nucleus	36.99	19.8
HORVU3Hr1G010260.2	Barley	mitochondrion	15.07	16.67

Protein Annotations

MapMan:15.5.5.3	Gene3D:2.40.330.10	UniProt:A0A287K2Q5	InterPro:B3_DNA-bd	InterPro:DNA-bd_pseudobarrel_sf	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:HORVU3Hr1G010200	EnsemblPlants:HORVU3Hr1G010200.1	InterPro:IPR003340	InterPro:IPR015300
PFAM:PF02362	PFscan:PS50863	PANTHER:PTHR31140	PANTHER:PTHR31140:SF9	SMART:SM01019	SUPFAM:SSF101936
UniParc:UPI000B48542D	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr3H:+:22297006..22298317

Molecular Weight (calculated)

24202.1 Da

IEP (calculated)

10.494

GRAVY (calculated)

-0.468

Length

219 amino acids

Sequence
(BLAST)

001: MLRKQTYADE LRQGLRRGRG MGVRAQPMPS WARVPLFEKA VTPSDVGKLN RLVVPKQHAE KHFPLKCTAE TTTTTGNGVL LNFEDGEGKV WRFRYSYWNS
101: SQSYVLTKGW SSFVREKGLG AGDSIVFSSS AYGQEKQLFI NCKKNTTMNG GKTALPLPVV ETAKGEQDHV VKLFGVDIAG VKRVRAATGE LGPPELFKRQ
201: SVAHGQHSPS LGCGRMNYI

Best Arabidopsis Sequence Match ( AT1G13260.1 )
(BLAST)

001: MESSSVDEST TSTGSICETP AITPAKKSSV GNLYRMGSGS SVVLDSENGV EAESRKLPSS KYKGVVPQPN GRWGAQIYEK HQRVWLGTFN EEDEAARAYD
101: VAVHRFRRRD AVTNFKDVKM DEDEVDFLNS HSKSEIVDML RKHTYNEELE QSKRRRNGNG NMTRTLLTSG LSNDGVSTTG FRSAEALFEK AVTPSDVGKL
201: NRLVIPKHHA EKHFPLPSSN VSVKGVLLNF EDVNGKVWRF RYSYWNSSQS YVLTKGWSRF VKEKNLRAGD VVSFSRSNGQ DQQLYIGWKS RSGSDLDAGR
301: VLRLFGVNIS PESSRNDVVG NKRVNDTEML SLVCSKKQRI FHAS

Arabidopsis Description

RAV1AP2/ERF and B3 domain-containing transcription factor RAV1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZWM9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.