Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU4Hr1G074300.4 | Barley | nucleus | 12.63 | 16.67 |
| HORVU4Hr1G082030.2 | Barley | nucleus | 20.71 | 16.14 |
| HORVU3Hr1G010100.2 | Barley | nucleus | 25.76 | 15.94 |
| OQU77426 | Sorghum | nucleus | 12.63 | 15.53 |
| HORVU3Hr1G010240.1 | Barley | nucleus | 27.27 | 15.52 |
| HORVU0Hr1G022200.1 | Barley | nucleus | 15.66 | 15.5 |
| HORVU3Hr1G010200.1 | Barley | mitochondrion | 16.67 | 15.07 |
| HORVU7Hr1G002230.1 | Barley | nucleus | 16.67 | 15.0 |
| HORVU3Hr1G064590.1 | Barley | nucleus | 14.65 | 14.95 |
| HORVU3Hr1G010060.1 | Barley | nucleus | 26.26 | 14.77 |
| HORVU4Hr1G082090.2 | Barley | mitochondrion | 25.25 | 14.53 |
| HORVU3Hr1G010190.5 | Barley | nucleus | 26.26 | 13.54 |
| HORVU5Hr1G040620.4 | Barley | nucleus | 18.18 | 13.14 |
| HORVU1Hr1G082670.6 | Barley | nucleus | 25.25 | 12.72 |
| HORVU3Hr1G064640.4 | Barley | nucleus | 24.24 | 12.63 |
| HORVU4Hr1G021650.22 | Barley | nucleus | 16.16 | 11.47 |
| HORVU7Hr1G046950.1 | Barley | nucleus | 15.66 | 11.31 |
| HORVU1Hr1G051780.2 | Barley | nucleus | 16.67 | 11.26 |
| HORVU4Hr1G084950.3 | Barley | nucleus | 16.16 | 9.38 |
| HORVU3Hr1G010140.3 | Barley | nucleus | 16.16 | 8.25 |
| HORVU6Hr1G066190.2 | Barley | nucleus | 15.66 | 7.58 |
Protein Annotations
| EnsemblPlants:HORVU3Hr1G010260.2 | EnsemblPlantsGene:HORVU3Hr1G010260 | Gene3D:2.40.330.10 | InterPro:DNA-bd_pseudobarrel_sf | InterPro:IPR015300 | PANTHER:PTHR31140 |
| PANTHER:PTHR31140:SF2 | SEG:seg | SUPFAM:SSF101936 | UniParc:UPI000B47A28A | UniProt:A0A287K2N6 | MapMan:35.2 |
Description
No Description!
Coordinates
chrchr3H:-:22458160..22459159
Molecular Weight (calculated)
18430.0 Da
IEP (calculated)
12.402
GRAVY (calculated)
-0.736
Length
198 amino acids
Sequence
(BLAST)
(BLAST)
001: HFSHCQMALV LQRRALVMNP RYNSSRCHTF VSNIGGLGHR PPPPPPFSHI EERXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXPPS TSRAWWWRRS
101: SPSWRRTPRL RSLTCSGSRP TPMNSATGLR RGRGSGGARA ADAVVGAGFP FRERPSTPSD VGKLNRLVVP KQHAEKHLPL KRTPGDDDHH RQRRTALT
101: SPSWRRTPRL RSLTCSGSRP TPMNSATGLR RGRGSGGARA ADAVVGAGFP FRERPSTPSD VGKLNRLVVP KQHAEKHLPL KRTPGDDDHH RQRRTALT
001: MEYSCVDDSS TTSESLSIST TPKPTTTTEK KLSSPPATSM RLYRMGSGGS SVVLDSENGV ETESRKLPSS KYKGVVPQPN GRWGAQIYEK HQRVWLGTFN
101: EEEEAASSYD IAVRRFRGRD AVTNFKSQVD GNDAESAFLD AHSKAEIVDM LRKHTYADEF EQSRRKFVNG DGKRSGLETA TYGNDAVLRA REVLFEKTVT
201: PSDVGKLNRL VIPKQHAEKH FPLPAMTTAM GMNPSPTKGV LINLEDRTGK VWRFRYSYWN SSQSYVLTKG WSRFVKEKNL RAGDVVCFER STGPDRQLYI
301: HWKVRSSPVQ TVVRLFGVNI FNVSNEKPND VAVECVGKKR SREDDLFSLG CSKKQAIINI L
101: EEEEAASSYD IAVRRFRGRD AVTNFKSQVD GNDAESAFLD AHSKAEIVDM LRKHTYADEF EQSRRKFVNG DGKRSGLETA TYGNDAVLRA REVLFEKTVT
201: PSDVGKLNRL VIPKQHAEKH FPLPAMTTAM GMNPSPTKGV LINLEDRTGK VWRFRYSYWN SSQSYVLTKG WSRFVKEKNL RAGDVVCFER STGPDRQLYI
301: HWKVRSSPVQ TVVRLFGVNI FNVSNEKPND VAVECVGKKR SREDDLFSLG CSKKQAIINI L
Arabidopsis Description
TEM1AP2/ERF and B3 domain-containing transcription repressor TEM1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6M5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.