Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU3Hr1G064590.1 | Barley | nucleus | 51.05 | 100.0 |
| TraesCS3D01G260100.1 | Wheat | nucleus | 88.68 | 90.11 |
| TraesCS3B01G293000.1 | Wheat | nucleus | 90.79 | 90.08 |
| TraesCS3A01G259900.1 | Wheat | nucleus | 87.37 | 88.53 |
| Os01t0693400-01 | Rice | nucleus | 79.21 | 76.59 |
| Zm00001d043782_P001 | Maize | nucleus | 77.89 | 76.09 |
| EES03472 | Sorghum | nucleus, plastid | 78.95 | 72.64 |
| Zm00001d011639_P001 | Maize | nucleus | 76.58 | 71.85 |
| HORVU1Hr1G082670.6 | Barley | nucleus | 68.16 | 65.9 |
| GSMUA_Achr1P21250_001 | Banana | nucleus | 47.63 | 61.56 |
| CDX97996 | Canola | nucleus | 48.16 | 56.31 |
| CDY40973 | Canola | nucleus | 46.58 | 56.19 |
| CDY61361 | Canola | nucleus | 48.16 | 55.96 |
| CDY72302 | Canola | nucleus | 47.63 | 55.52 |
| CDY36099 | Canola | nucleus | 51.05 | 55.43 |
| CDY58354 | Canola | nucleus | 47.37 | 55.21 |
| CDX84999 | Canola | nucleus | 51.32 | 55.08 |
| CDY24391 | Canola | nucleus | 48.95 | 55.03 |
| CDY16133 | Canola | nucleus | 51.84 | 55.03 |
| KRH34761 | Soybean | nucleus | 50.79 | 54.99 |
| HORVU4Hr1G074300.4 | Barley | nucleus | 21.58 | 54.67 |
| AT3G25730.1 | Thale cress | nucleus | 47.89 | 54.65 |
| CDX81561 | Canola | nucleus | 49.21 | 54.52 |
| AT1G68840.1 | Thale cress | nucleus | 50.26 | 54.26 |
| Bra011002.1-P | Field mustard | nucleus | 51.05 | 54.04 |
| Bra026509.1-P | Field mustard | nucleus | 46.32 | 53.99 |
| Bra019821.1-P | Field mustard | nucleus | 48.42 | 53.96 |
| CDY45849 | Canola | nucleus, plastid | 49.47 | 53.71 |
| Bra038346.1-P | Field mustard | nucleus, plastid | 49.47 | 53.71 |
| KRG92025 | Soybean | nucleus | 51.05 | 53.59 |
| Bra026917.1-P | Field mustard | nucleus | 47.89 | 53.53 |
| AT1G13260.1 | Thale cress | nucleus | 48.16 | 53.2 |
| Bra024735.1-P | Field mustard | nucleus | 51.58 | 52.69 |
| CDX99755 | Canola | nucleus | 47.11 | 52.65 |
| VIT_01s0011g03070.t01 | Wine grape | nucleus | 52.37 | 52.65 |
| AT1G25560.1 | Thale cress | nucleus | 50.0 | 52.63 |
| GSMUA_Achr6P01420_001 | Banana | nucleus | 42.89 | 51.58 |
| HORVU3Hr1G010100.2 | Barley | nucleus | 43.16 | 51.25 |
| KRH75484 | Soybean | nucleus | 51.58 | 51.04 |
| CDX83547 | Canola | nucleus | 42.63 | 50.0 |
| PGSC0003DMT400002125 | Potato | nucleus | 52.11 | 49.75 |
| Solyc05g009790.1.1 | Tomato | nucleus | 51.58 | 49.62 |
| KRH70603 | Soybean | nucleus | 51.84 | 49.13 |
| HORVU3Hr1G010240.1 | Barley | nucleus | 44.74 | 48.85 |
| HORVU4Hr1G082090.2 | Barley | mitochondrion | 43.42 | 47.97 |
| HORVU4Hr1G082030.2 | Barley | nucleus | 31.58 | 47.24 |
| HORVU3Hr1G010060.1 | Barley | nucleus | 43.16 | 46.59 |
| HORVU3Hr1G010200.1 | Barley | mitochondrion | 26.05 | 45.21 |
| HORVU3Hr1G010190.5 | Barley | nucleus | 44.47 | 44.01 |
| HORVU0Hr1G022200.1 | Barley | nucleus | 21.05 | 40.0 |
| HORVU7Hr1G002230.1 | Barley | nucleus | 21.84 | 37.73 |
| HORVU5Hr1G040620.4 | Barley | nucleus | 23.68 | 32.85 |
| HORVU1Hr1G051780.2 | Barley | nucleus | 24.47 | 31.74 |
| HORVU7Hr1G046950.1 | Barley | nucleus | 22.63 | 31.39 |
| HORVU4Hr1G021650.22 | Barley | nucleus | 22.89 | 31.18 |
| HORVU4Hr1G084950.3 | Barley | nucleus | 26.84 | 29.91 |
| HORVU6Hr1G066190.2 | Barley | nucleus | 29.47 | 27.38 |
| HORVU3Hr1G010140.3 | Barley | nucleus | 25.26 | 24.74 |
| HORVU3Hr1G010260.2 | Barley | mitochondrion | 12.63 | 24.24 |
Protein Annotations
| MapMan:15.5.5.3 | MapMan:15.5.7.5 | Gene3D:2.40.330.10 | Gene3D:3.30.730.10 | UniProt:A0A287LD43 | InterPro:AP2/ERF_dom |
| InterPro:AP2/ERF_dom_sf | InterPro:B3_DNA-bd | InterPro:DNA-bd_dom_sf | InterPro:DNA-bd_pseudobarrel_sf | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:HORVU3Hr1G064640 | EnsemblPlants:HORVU3Hr1G064640.4 | InterPro:IPR001471 | InterPro:IPR003340 |
| InterPro:IPR015300 | InterPro:IPR036955 | PFAM:PF00847 | PFAM:PF02362 | PFscan:PS50863 | PFscan:PS51032 |
| PANTHER:PTHR31140 | PANTHER:PTHR31140:SF21 | SMART:SM00380 | SMART:SM01019 | SUPFAM:SSF101936 | SUPFAM:SSF54171 |
| UniParc:UPI000B47137C | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chrchr3H:-:493232197..493234808
Molecular Weight (calculated)
40070.0 Da
IEP (calculated)
9.460
GRAVY (calculated)
-0.377
Length
380 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSTSCLADD ATTSSGGGGA STDKLKALAA AAAAAAPIER VGSGASAVLD AAEPGSEADS GGGRAGKLPS SRYKGVVPQP NGRWGAQIYE RHQRVWLGTF
101: PGEADAARAY DVAAQRFRGR DAVTNFRPLA DADPDAAAEL RFLAARSKAE VVDMLRKHTY FDELAQSKRA FAASAALSAP TTSGDAGGSA SPPSPAAVRE
201: HLFDKTVTPS DVGKLNRLVI PKQNAEKHFP LQLPAGGGES KGLLLNFEDD AGKVWRFRYS YWNSSQSYVL TKGWSRFVKE KGLGAGDVVG FYRSAAGRTG
301: EDSKFFIDCR LRPNTNTAAE ADPVDQSSAP VQKAVRLFGV DLLAAPEQGM PGGCKRARDL VKPPPPKVAF KKQCIELALA
101: PGEADAARAY DVAAQRFRGR DAVTNFRPLA DADPDAAAEL RFLAARSKAE VVDMLRKHTY FDELAQSKRA FAASAALSAP TTSGDAGGSA SPPSPAAVRE
201: HLFDKTVTPS DVGKLNRLVI PKQNAEKHFP LQLPAGGGES KGLLLNFEDD AGKVWRFRYS YWNSSQSYVL TKGWSRFVKE KGLGAGDVVG FYRSAAGRTG
301: EDSKFFIDCR LRPNTNTAAE ADPVDQSSAP VQKAVRLFGV DLLAAPEQGM PGGCKRARDL VKPPPPKVAF KKQCIELALA
001: MEYSCVDDSS TTSESLSIST TPKPTTTTEK KLSSPPATSM RLYRMGSGGS SVVLDSENGV ETESRKLPSS KYKGVVPQPN GRWGAQIYEK HQRVWLGTFN
101: EEEEAASSYD IAVRRFRGRD AVTNFKSQVD GNDAESAFLD AHSKAEIVDM LRKHTYADEF EQSRRKFVNG DGKRSGLETA TYGNDAVLRA REVLFEKTVT
201: PSDVGKLNRL VIPKQHAEKH FPLPAMTTAM GMNPSPTKGV LINLEDRTGK VWRFRYSYWN SSQSYVLTKG WSRFVKEKNL RAGDVVCFER STGPDRQLYI
301: HWKVRSSPVQ TVVRLFGVNI FNVSNEKPND VAVECVGKKR SREDDLFSLG CSKKQAIINI L
101: EEEEAASSYD IAVRRFRGRD AVTNFKSQVD GNDAESAFLD AHSKAEIVDM LRKHTYADEF EQSRRKFVNG DGKRSGLETA TYGNDAVLRA REVLFEKTVT
201: PSDVGKLNRL VIPKQHAEKH FPLPAMTTAM GMNPSPTKGV LINLEDRTGK VWRFRYSYWN SSQSYVLTKG WSRFVKEKNL RAGDVVCFER STGPDRQLYI
301: HWKVRSSPVQ TVVRLFGVNI FNVSNEKPND VAVECVGKKR SREDDLFSLG CSKKQAIINI L
Arabidopsis Description
TEM1AP2/ERF and B3 domain-containing transcription repressor TEM1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6M5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.